Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028613_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:40787502:40790508:-1 gene:Zm00001d028613 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1A chloroplastic
Sequence	ATGGGGAACTGCGCCGGCGTGGAGGGGAACGCCGAGATCAACCCTTCCTTCAGTGCCCCC AATTCCTCAGGGACCGCCGGTTCTAAGAGCGTCAGCAAGAACGCGGCCGACACCAGCACC TTCGGCACCAAGACGTCCGGCTCGTCGTCGTCGGTGCCGCCAACCCCTCGTACGGAGGCG GAGATCCTGGAGTCGTCGAATGTCCGCAAGTTCAGCTTCGGCGAGCTCAAAGGCTCCACG AGGAACTTCAGGCCGGACAGCCTGCTCGGGGAGGGGGGCTTCGGGTCCGTGTTCAAGGGG TGGATGGATGAGCGCACGCTCGCGCCCGTCAGGCCGGGCGCCGGGATCATCGTCGCCGTC AAGAAGCTCAAGCTCGACAGCTTCCAAGGGCACCGGGAATGGCTGGCGGAGGTCAATTAC CTGGGGCAGTTATCCCACCCTAATCTCGTGAAACTCATCGGCTACTGCTTGGAGGACGAG CAGCGGCTTCTTGTGTACGAGTATATGCCGAGAGGGAGCCTGGAGCATCATCTCTTCAGG AGTAGGCTCTCTCTCGAGTGTTTCGTTCGCGATATCCCTCCATTCTTGGCTTCTCGCTTT ATGAAAAAAAGGACTGAATGCTATGGTGTTGCAGGGGGCTCGAACTTCCAGCCGCTCCCA TGGAACTTACGCATGAAGGTTGCTCTCGAGGCTGCCAGAGGTCTTGCTTTCCTGCACGGC GACCAGGCCAAAGTTATCTACCGCGATTTCAAGACCTCCAATATCCTTCTCGACTCGGAG TACAACGCAAAACTGTCTGATTTCGGTTTGGCAAAGGACGGTCCAAGCGGTGATAAGAGC CATGTTTCTACTAGGGTCATGGGGACACAAGGATACGCTGCCCCTGAATATCTTGCGACA GGCCATTTGACAGCGAAGAGCGATGTGTACAGCTACGGTGTGGTTCTTCTGGAGCTGCTG TCCGGGCAGCGCGCTCTGGACAAGAACCGCCCGCCCGGTCAGCACAATCTGGTGGAGTGG GCTAGACCTTACATCACCAACAAGAGGAGGGTCATTCATGTCCTGGACTCACGGCTGGGT TCCCAGTATTCCCTTCCCGCGGCTCAGAAGGTGGCAACACTGGCGCTGCAATGCTTATCG ATGGACGCACGATGCAGGCCTGGCATGGATCAGGTTGTGACTGCATTAGAACAACTTCAA AGGCCAAGGGCTCACTGA

Peptide Sequence

PEP ID	Zm00001d028613_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:40787502:40790508:-1 gene:Zm00001d028613 transcript:Zm00001d028613_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1A chloroplastic
Sequence	MGNCAGVEGNAEINPSFSAPNSSGTAGSKSVSKNAADTSTFGTKTSGSSSSVPPTPRTEA EILESSNVRKFSFGELKGSTRNFRPDSLLGEGGFGSVFKGWMDERTLAPVRPGAGIIVAV KKLKLDSFQGHREWLAEVNYLGQLSHPNLVKLIGYCLEDEQRLLVYEYMPRGSLEHHLFR SRLSLECFVRDIPPFLASRFMKKRTECYGVAGGSNFQPLPWNLRMKVALEAARGLAFLHG DQAKVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPSGDKSHVSTRVMGTQGYAAPEYLAT GHLTAKSDVYSYGVVLLELLSGQRALDKNRPPGQHNLVEWARPYITNKRRVIHVLDSRLG SQYSLPAAQKVATLALQCLSMDARCRPGMDQVVTALEQLQRPRAH

Transcript Sequence

Transcript ID	Zm00001d028613_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:40787502:40790508:-1 gene:Zm00001d028613 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase APK1A chloroplastic
Sequence	CTCCACCGCCCTCCCTCGCAGGCAGGCAGGCAGCCAGAGCCAGAGCCAGCCGGGCAAGCA CTGCAGCAGCCATTGTACTCATCACCTCCTTCCCACGCAGCGAGAGGATGACACCACGAG GCAAATAAACCCAGACGTAGTTCAGCTAGCCGCTTCTACCTCCCTCTCCCCCCCCGCCTG CGCGCTGCCGCGAGAGCTCGTTCCTGATGGGGAACTGCGCCGGCGTGGAGGGGAACGCCG AGATCAACCCTTCCTTCAGTGCCCCCAATTCCTCAGGGACCGCCGGTTCTAAGAGCGTCA GCAAGAACGCGGCCGACACCAGCACCTTCGGCACCAAGACGTCCGGCTCGTCGTCGTCGG TGCCGCCAACCCCTCGTACGGAGGCGGAGATCCTGGAGTCGTCGAATGTCCGCAAGTTCA GCTTCGGCGAGCTCAAAGGCTCCACGAGGAACTTCAGGCCGGACAGCCTGCTCGGGGAGG GGGGCTTCGGGTCCGTGTTCAAGGGGTGGATGGATGAGCGCACGCTCGCGCCCGTCAGGC CGGGCGCCGGGATCATCGTCGCCGTCAAGAAGCTCAAGCTCGACAGCTTCCAAGGGCACC GGGAATGGCTGGCGGAGGTCAATTACCTGGGGCAGTTATCCCACCCTAATCTCGTGAAAC TCATCGGCTACTGCTTGGAGGACGAGCAGCGGCTTCTTGTGTACGAGTATATGCCGAGAG GGAGCCTGGAGCATCATCTCTTCAGGAGTAGGCTCTCTCTCGAGTGTTTCGTTCGCGATA TCCCTCCATTCTTGGCTTCTCGCTTTATGAAAAAAAGGACTGAATGCTATGGTGTTGCAG GGGGCTCGAACTTCCAGCCGCTCCCATGGAACTTACGCATGAAGGTTGCTCTCGAGGCTG CCAGAGGTCTTGCTTTCCTGCACGGCGACCAGGCCAAAGTTATCTACCGCGATTTCAAGA CCTCCAATATCCTTCTCGACTCGGAGTACAACGCAAAACTGTCTGATTTCGGTTTGGCAA AGGACGGTCCAAGCGGTGATAAGAGCCATGTTTCTACTAGGGTCATGGGGACACAAGGAT ACGCTGCCCCTGAATATCTTGCGACAGGCCATTTGACAGCGAAGAGCGATGTGTACAGCT ACGGTGTGGTTCTTCTGGAGCTGCTGTCCGGGCAGCGCGCTCTGGACAAGAACCGCCCGC CCGGTCAGCACAATCTGGTGGAGTGGGCTAGACCTTACATCACCAACAAGAGGAGGGTCA TTCATGTCCTGGACTCACGGCTGGGTTCCCAGTATTCCCTTCCCGCGGCTCAGAAGGTGG CAACACTGGCGCTGCAATGCTTATCGATGGACGCACGATGCAGGCCTGGCATGGATCAGG TTGTGACTGCATTAGAACAACTTCAAAGGCCAAGGGCTCACTGAAAAAGATGTCCATCTA CATCTGTGGAGTCTGGAGCATCCTCCTGTAATACTTTAGGGGAGTAAAAAAACAGAGAAC GGACGAGGGTTTGAAGGGCTAAGTGGCTTGTGAAGAGAATATAATATTGCCTTGCTTTGT GTACAGCTAGTTGCTTCGTCGTTGTAACTTGGGTCTCTACTTATATATTTTATTAGTCTT CGATGTACCAGCGGTTCAAAGGGTAAGTTCTTTTGTTCCACTTCACCG