Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028593_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:1:40163141:40168735:1 gene:Zm00001d028593 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SDIR1
Sequence	ATGAGCTTTGTGTTCCGAGGGAGCAGGACCGACATCGAGGCCGGTGGCTTCCCAGGGTTC GCTCCCGAGCGCCGCGCCATGCGAATTCATGCAGGGAGCAGGCCGGTGAATAGCAATTCC TTGGCTTTTCTTCTAACTGTTCTTGTTTTGTTCATGGTACTGAACTCGCACCAGATCTCT CCCAATCTTCTGCTTTGGCTTGTCTTGGGAGTCTTCCTAATGGCCACGAGCCTCAGAATG TATGCCACGTGCCAGCAGCTTGCTCATGCTGCAGCTGCCAACAGTTTTCTCGGCCACACT GAGCTGCGTGTGCATGTACCGCCGTCCATTACCCTTGCTACGAGAGGCCGGTTACAGAGC CTTAGACTTCAACTGGCTCTTCTTGATCGTGAATTTGACGATTTAGATTATGACACTCTG AGAGCATTGGATGCTGACAATAGCCCACATGCTCCATCTATGAGTGAAGAAGAAATAAAT TCTCTTCCTGTCTTCAAATATAAAGTTCAGGCACAACAGAGGCATCCCCCTGCCCGAAAA AGTGATGGGCCATCTCAGCTATCGGTTTCTTCAACTGGGTCCGGCAATGAGGAAAAGCAG GATGGTTTAAAAGCAGATGGAACCAGCAAACCTTCAGAGGATGAACTAACATGTAGTGTT TGCTTAGAGCAAGTCACGGTGGGTGATCTGTTGAGAAGCCTACCATGCTTGCATCAGTTT CACGTAAACTGCATCGACCCATGGCTGCGCCAACAGGGTACATGCCCAATCTGCAAGCAC CAGGTGAGCGATGGGTGGCATGCTACAGGCAACGGTGAAGAGGATGCTTCTTACATGGTG TGA

Peptide Sequence

PEP ID	Zm00001d028593_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:1:40163141:40168735:1 gene:Zm00001d028593 transcript:Zm00001d028593_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SDIR1
Sequence	MSFVFRGSRTDIEAGGFPGFAPERRAMRIHAGSRPVNSNSLAFLLTVLVLFMVLNSHQIS PNLLLWLVLGVFLMATSLRMYATCQQLAHAAAANSFLGHTELRVHVPPSITLATRGRLQS LRLQLALLDREFDDLDYDTLRALDADNSPHAPSMSEEEINSLPVFKYKVQAQQRHPPARK SDGPSQLSVSSTGSGNEEKQDGLKADGTSKPSEDELTCSVCLEQVTVGDLLRSLPCLHQF HVNCIDPWLRQQGTCPICKHQVSDGWHATGNGEEDASYMV

Transcript Sequence

Transcript ID	Zm00001d028593_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:40163141:40168735:1 gene:Zm00001d028593 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SDIR1
Sequence	CGCGACGGCGGCGCGACCGGTTCGCTGGTCTAACGGAGTTTCTAGCTGGGATTTCTTGTT GGAGCGTCGCTCTCCGGCGCTTATTTCATTTATATTTGTCTGTGCCTCAGGTTCACTGGC CAATTCGTTGCTTCGTGGGGCTTTGGAGTTTGGAGCCAATCTTGCCCCTTAAAGTGTCGG TGGCAGCGTTTTGTGATCATCATGAGCTTTGTGTTCCGAGGGAGCAGGACCGACATCGAG GCCGGTGGCTTCCCAGGGTTCGCTCCCGAGCGCCGCGCCATGCGAATTCATGCAGGGAGC AGGCCGGTGAATAGCAATTCCTTGGCTTTTCTTCTAACTGTTCTTGTTTTGTTCATGGTA CTGAACTCGCACCAGATCTCTCCCAATCTTCTGCTTTGGCTTGTCTTGGGAGTCTTCCTA ATGGCCACGAGCCTCAGAATGTATGCCACGTGCCAGCAGCTTGCTCATGCTGCAGCTGCC AACAGTTTTCTCGGCCACACTGAGCTGCGTGTGCATGTACCGCCGTCCATTACCCTTGCT ACGAGAGGCCGGTTACAGAGCCTTAGACTTCAACTGGCTCTTCTTGATCGTGAATTTGAC GATTTAGATTATGACACTCTGAGAGCATTGGATGCTGACAATAGCCCACATGCTCCATCT ATGAGTGAAGAAGAAATAAATTCTCTTCCTGTCTTCAAATATAAAGTTCAGGCACAACAG AGGCATCCCCCTGCCCGAAAAAGTGATGGGCCATCTCAGCTATCGGTTTCTTCAACTGGG TCCGGCAATGAGGAAAAGCAGGATGGTTTAAAAGCAGATGGAACCAGCAAACCTTCAGAG GATGAACTAACATGTAGTGTTTGCTTAGAGCAAGTCACGGTGGGTGATCTGTTGAGAAGC CTACCATGCTTGCATCAGTTTCACGTAAACTGCATCGACCCATGGCTGCGCCAACAGGGT ACATGCCCAATCTGCAAGCACCAGGTGAGCGATGGGTGGCATGCTACAGGCAACGGTGAA GAGGATGCTTCTTACATGGTGTGAGTAGCTGACTAGGAGTAGGCCATAGCTAACTACCAG TAGCTGCTAACTGAATCCGTGGAACATAGTTTTCGAGGTGACGGGTTGGACTGATCTAGG GATGTGATCTAATCCCTTTCTATCCTAACAAAACCGCGTGTGGAAACAGTTGTCCAGTAC GGTTCTTTTACAGGTAACGCTCATTTCAATCATTCTCTGTAACG