Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028586_T013
CDS Infomation

cds chromosome:B73_RefGen_v4:1:40092948:40097126:1 gene:Zm00001d028586 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TOC75-3 chloroplastic
Sequence

ATGACGGTGCCGCTCACGAAGCTGAGCGGGCTGAAGAGGTACAAGCTGTCTGAGCTCAAG
TTCTTTGACCGGGCAGCTGCCGGCGGTGGCGCCTACACGGGGCCAGAGGATTCCTTCTTC
GAAATGGTCACACTGCAGCCTGGTGGCGTGTACACCAAGTCGCAGCTGTTGAAGGAGCTT
GAAACACTCGTTTCCTGTGGCATGTTCGAGCGGGTTGATCTGGAGGTGAAGCCCAAGCCA
GATAACACAATTGGGCTCACAGTCTCCTTTGTGGAGAGTGTGTGGAGTGCTGCAAAGCAG
TTCAAGTGCATCAATGTGGGGCTTATGTCACAGTCAGGGCAGGTTGACTTCGACCAGGAC
ATGACAGAGAGGGAGAAAATGGATTACCTCCGCAAGCAGGAACGCGATTACCAGCAGCGT
GTAAGGGGTGCCAAGCCCTGCATCTTGCCAGAAAATGTACGTGGAGAGGTGCTGGGAATG
ATGAAGAAGCAGGAGAAGGTGAGCGCCAGGATGCTGCAGAAGATCAGGGACCATGTCCAG
AAATGGTACCACAACGAGGGTTTCGTATGCGCACAGGTTGTTAACTTTGGAAACCTTAAC
ACCAATGAGGTTGTCTGTGAGGTGGTTGAGGGTGACATCACCAAGGTGGAGTACCAGTTC
CAGGATAAGCTTGGAAATATTGTTGAGGGAAATACCCAGCTTCAGATCATAGACCGTGAG
CTGCCCCAACAGCTTCGACCTGGCCACATCTTTAACATTGGAGCAGGGAAACAGGCTCTG
AAGAATATAAATTCACTTGCTTTGTTTTCAAATATAGAAGTTAATCCACGTCCTGATGAG
ACAAAGGAAGGGGGCATAGTAGTTGAAATTAAGCTTAAGGAACTGGAACCCAAGTCAGCT
GAAGTAAGCACAGAATGGAGTATTGTACCTGGGCGTGAAGGCCGGCCAACTTTGGCATCC
ATACAACCTGGAGGAACTGTGTCATTTGAGCACCGGAACATCTATGGTCTAAATAGATCT
ATTGTTGGTTCTGTCACTTCCAGCAACCTGCTGAACCCTCAGGATGATCTTTCATTCAAG
CTTGAGTATGTTCATCCTTATTTGGATGGTGTGGATGATCGTAGTAAAAACCGTACATTT
AAAACTAGCTGCTTCAACACCAGGAAGTTGAGTCCTGTCTTTGTTGCTGGTCCCAACATG
GATGAGGCTCCACCTGTTTGGATCGATAGAGTTGGATTTAAAGCCAACATAACTGAGAGC
TTCACACGGCAAAGCAAATTCACATATGGCCTCGTGGTTGAAGAGATTACAACACGTGAT
GAAACTAATACTATCTGTACCCATGGTTCACGAGCAATGCCTAGCGGCGGTTTGAGCATG
GACGGACCTCCCACAACACTCAGTGGTACTGGAGTTGACCGGATGGCATTCCTTCAGGCT
AATATAACCCGTGACAATACTGAGTTTGTGAATGGTGCAATTGTTGGAGACAGATACATT
TTCCAGCTAGACCAAGGTCTTGGCATCGGGAGCAAAAACCCATTCTTCAACCGTCATCAA
CTGACTCTGACCAAGTTCATCAATTTAAATAAGCAAGAGAAAGGTGCTGGCAAGCCACTA
CCAGCTGTTTTGGTTCTTCATAGTCATTATGCTGGTTGTGTGGGTGATTTGCCAAGCTAT
GATGCATTTGCACTTGGAGGGCCTTACTCTGTTAGGGGCTTTAGTAATGGTGAACTGGGC
GCTTCTAGGAATATTCTTGAGCTTGCTACTGAGTTGCGTGTCCCTATAAGAAACACCCAC
GTGTATGCATTTGCTGAACATGGGACTGACCTTGGAAGTTCCAAGGACGTGAAAGGAAAC
CCTACGGAGTTTTTCAGGCGCGTAGGTCATGGATCTTCATATGGCGTTGGCGTCAAGCTT
GGGTTGGTAAGGGGAGAGTACATCGTAGATCACAATGCTGGTACTGGGACCGTTTTTTTC
AGATTTGGTGAGAGATTTTGA

Peptide Sequence

PEP ID

Zm00001d028586_P013
PEP Infomation

pep chromosome:B73_RefGen_v4:1:40092948:40097126:1 gene:Zm00001d028586 transcript:Zm00001d028586_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TOC75-3 chloroplastic
Sequence

MTVPLTKLSGLKRYKLSELKFFDRAAAGGGAYTGPEDSFFEMVTLQPGGVYTKSQLLKEL
ETLVSCGMFERVDLEVKPKPDNTIGLTVSFVESVWSAAKQFKCINVGLMSQSGQVDFDQD
MTEREKMDYLRKQERDYQQRVRGAKPCILPENVRGEVLGMMKKQEKVSARMLQKIRDHVQ
KWYHNEGFVCAQVVNFGNLNTNEVVCEVVEGDITKVEYQFQDKLGNIVEGNTQLQIIDRE
LPQQLRPGHIFNIGAGKQALKNINSLALFSNIEVNPRPDETKEGGIVVEIKLKELEPKSA
EVSTEWSIVPGREGRPTLASIQPGGTVSFEHRNIYGLNRSIVGSVTSSNLLNPQDDLSFK
LEYVHPYLDGVDDRSKNRTFKTSCFNTRKLSPVFVAGPNMDEAPPVWIDRVGFKANITES
FTRQSKFTYGLVVEEITTRDETNTICTHGSRAMPSGGLSMDGPPTTLSGTGVDRMAFLQA
NITRDNTEFVNGAIVGDRYIFQLDQGLGIGSKNPFFNRHQLTLTKFINLNKQEKGAGKPL
PAVLVLHSHYAGCVGDLPSYDAFALGGPYSVRGFSNGELGASRNILELATELRVPIRNTH
VYAFAEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGVGVKLGLVRGEYIVDHNAGTGTVFF
RFGERF

Transcript Sequence

Transcript ID

Zm00001d028586_T013
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:40092948:40097126:1 gene:Zm00001d028586 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein TOC75-3 chloroplastic
Sequence

CGCACGGGCTCCCCGTCAACATGACGGTGCCGCTCACGAAGCTGAGCGGGCTGAAGAGGT
ACAAGCTGTCTGAGCTCAAGTTCTTTGACCGGGCAGCTGCCGGCGGTGGCGCCTACACGG
GGCCAGAGGATTCCTTCTTCGAAATGGTCACACTGCAGCCTGGTGGCGTGTACACCAAGT
CGCAGCTGTTGAAGGAGCTTGAAACACTCGTTTCCTGTGGCATGTTCGAGCGGGTTGATC
TGGAGGTGAAGCCCAAGCCAGATAACACAATTGGGCTCACAGTCTCCTTTGTGGAGAGTG
TGTGGAGTGCTGCAAAGCAGTTCAAGTGCATCAATGTGGGGCTTATGTCACAGTCAGGGC
AGGTTGACTTCGACCAGGACATGACAGAGAGGGAGAAAATGGATTACCTCCGCAAGCAGG
AACGCGATTACCAGCAGCGTGTAAGGGGTGCCAAGCCCTGCATCTTGCCAGAAAATGTAC
GTGGAGAGGTGCTGGGAATGATGAAGAAGCAGGAGAAGGTGAGCGCCAGGATGCTGCAGA
AGATCAGGGACCATGTCCAGAAATGGTACCACAACGAGGGTTTCGTATGCGCACAGGTTG
TTAACTTTGGAAACCTTAACACCAATGAGGTTGTCTGTGAGGTGGTTGAGGGTGACATCA
CCAAGGTGGAGTACCAGTTCCAGGATAAGCTTGGAAATATTGTTGAGGGAAATACCCAGC
TTCAGATCATAGACCGTGAGCTGCCCCAACAGCTTCGACCTGGCCACATCTTTAACATTG
GAGCAGGGAAACAGGCTCTGAAGAATATAAATTCACTTGCTTTGTTTTCAAATATAGAAG
TTAATCCACGTCCTGATGAGACAAAGGAAGGGGGCATAGTAGTTGAAATTAAGCTTAAGG
AACTGGAACCCAAGTCAGCTGAAGTAAGCACAGAATGGAGTATTGTACCTGGGCGTGAAG
GCCGGCCAACTTTGGCATCCATACAACCTGGAGGAACTGTGTCATTTGAGCACCGGAACA
TCTATGGTCTAAATAGATCTATTGTTGGTTCTGTCACTTCCAGCAACCTGCTGAACCCTC
AGGATGATCTTTCATTCAAGCTTGAGTATGTTCATCCTTATTTGGATGGTGTGGATGATC
GTAGTAAAAACCGTACATTTAAAACTAGCTGCTTCAACACCAGGAAGTTGAGTCCTGTCT
TTGTTGCTGGTCCCAACATGGATGAGGCTCCACCTGTTTGGATCGATAGAGTTGGATTTA
AAGCCAACATAACTGAGAGCTTCACACGGCAAAGCAAATTCACATATGGCCTCGTGGTTG
AAGAGATTACAACACGTGATGAAACTAATACTATCTGTACCCATGGTTCACGAGCAATGC
CTAGCGGCGGTTTGAGCATGGACGGACCTCCCACAACACTCAGTGGTACTGGAGTTGACC
GGATGGCATTCCTTCAGGCTAATATAACCCGTGACAATACTGAGTTTGTGAATGGTGCAA
TTGTTGGAGACAGATACATTTTCCAGCTAGACCAAGGTCTTGGCATCGGGAGCAAAAACC
CATTCTTCAACCGTCATCAACTGACTCTGACCAAGTTCATCAATTTAAATAAGCAAGAGA
AAGGTGCTGGCAAGCCACTACCAGCTGTTTTGGTTCTTCATAGTCATTATGCTGGTTGTG
TGGGTGATTTGCCAAGCTATGATGCATTTGCACTTGGAGGGCCTTACTCTGTTAGGGGCT
TTAGTAATGGTGAACTGGGCGCTTCTAGGAATATTCTTGAGCTTGCTACTGAGTTGCGTG
TCCCTATAAGAAACACCCACGTGTATGCATTTGCTGAACATGGGACTGACCTTGGAAGTT
CCAAGGACGTGAAAGGAAACCCTACGGAGTTTTTCAGGCGCGTAGGTCATGGATCTTCAT
ATGGCGTTGGCGTCAAGCTTGGGTTGGTAAGGGGAGAGTACATCGTAGATCACAATGCTG
GTACTGGGACCGTTTTTTTCAGATTTGGTGAGAGATTTTGAGTATGCTGCCTCCCGTTAC
CGTGGAAGGCAGGCTTCTGAGGTACTTTGTTTAGCGATGTTTGTGGTCTGATAGGACTCA
AACGGCATTGGAGCTCTGCTGAAATAATGAAGCTATTTTCTGAGGAAGAGTGATAGCTAG
TGTGAGATTAAATTTTCTTCATGTAGGATGTAAGATCTGTTCTTTCAGAGCTGGGAGCTC
ATAAATAGATGAATGTTC