Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028585_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:40036028:40038476:1 gene:Zm00001d028585 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 3 description: sigma-like factor2B
Sequence	ATGGCGTTCCTCGCGCCTCCGCAGTTCAAGTGGCCCCTTTCCACCCGTGCGGCGGCGGTG TTCAGGGAGCCCACCGGCGGCGCAGGCTCCCGCCCCAGTCGGATAAACTGTTCTTTCTCC TCCACGGCAGTCGTCGATGCAGAGTGCTTATCCGTCGGGCCGCCGCCTTCTCCTCACCGA ACGCTTCCGGGCTGTTTCGGTGAGGCACTTCTTAACAAGGAGGCAGTGGTGGCGGCCGCG GCCGCGGAAGCCGTCGCTCTGGCTCGCGCAGCGGCCGAGGTCGCCGGAGAAGTCGCCCGG ATGGCGCAGAATGATCACCCGGCTGCCTTACCGCCGCGCGATGACACGGTGGATAGCTTC CTGTCAAGAGAGGTCCTCCGCTCCGAGGTGGGGCTGGATGCCAGGCGCGCCGGGCTCGTC GAAATGCTGGAGGGCGAAGAGCACAGCAGCATTTTCAGCGACGAATCCGAGGATGACGAT GATGGCGGGCATAGCATAGCCGTAACGGTGAAGTCGGCGCGGCGGTCCGAGAGAAGGGCT CGGAGAGTGAGGGCAGCGATGAAGACGGCCAAGTGTTCCAGCAGCATGAAGCCCGTTGGA GCGTCCTCCACAAGGAGGAAACGGTTGAAGGGTTGCCTGACTCCTCTCGGGTGCTTGTAC AAGATGACCGGCCCGAGGCTTCTGACGGCGGAACAAGAAGTCGAATTCTCAGAAGGCATT CAGGACCTTCTGAAACTGGAAGCCATCCAAAAGGAGGTTGCGCAGTATAATGCTGGTGAA CCAACGTTTTCCCAGTGGGCGGCAGCAGCCGGGACCGATGAGAACACTCTGCGGAGACGC CTGAATCATGGAGTCTACTGCAAGAACAGGATGGTGAAATCTAACGTGCGGCTTGTAATC TCGATTGCAAAAGAACACGAAGGCCCCGGGATGGAGTTCTCTGATCTTATTCAGGATGGA ATGCAAGGCCTGATAAGAGGCGCGGAAAAGTTCGACGCTTCCAAGGGTTTTAGATTCTCC ACTTACTCTCACTGGTGGATTAAACAAGCAATACGCAAGTCCGTTTTAGAACAAACCCAG ATAATCCGCCTGCCGGCACACATGGCTGAAGCGAGTTCCCGAGTGAAGGAATGCTGCCGG CGACTCGGCCGTGAGCTGAAACGGCTCCCCAGCAACGAAGAGATCGCGGTGGACACTGGC ATGACGATCCGGCGGGTGGAGGCGGCCATGAGCCTCCCGAAATACAGCGTGTCCTTCACG AGCAAGGTCGGGTGCACGGACGTCACGTACCAGGAGATCATGCCGGACACGAGCGCCGAG ACGGCGGAGGAGACGCTGCACCGGTGGCTGATGAAGAAGGACGTGAACACGGCGCTGGAC AGCCTGAGCCCGCGCGAGAAGCAGGTGATGCGGTACCGGTTCGGCATCGAGGGCGGGCGG GCCAGGACCCTGCACGACATCGGGCAGCTCATGGGGGTCAGCCGGGAGCGGATCCGGCAG ATCGAGCTGGGCGCGTTCCGGAAGCTGCGGAGCAAGAACAGGTTGCAGTCGCTGCAGCAC TACCTGCGGCCGGCGGAGAGCTGGTAG

Peptide Sequence

PEP ID	Zm00001d028585_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:40036028:40038476:1 gene:Zm00001d028585 transcript:Zm00001d028585_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 3 description: sigma-like factor2B
Sequence	MAFLAPPQFKWPLSTRAAAVFREPTGGAGSRPSRINCSFSSTAVVDAECLSVGPPPSPHR TLPGCFGEALLNKEAVVAAAAAEAVALARAAAEVAGEVARMAQNDHPAALPPRDDTVDSF LSREVLRSEVGLDARRAGLVEMLEGEEHSSIFSDESEDDDDGGHSIAVTVKSARRSERRA RRVRAAMKTAKCSSSMKPVGASSTRRKRLKGCLTPLGCLYKMTGPRLLTAEQEVEFSEGI QDLLKLEAIQKEVAQYNAGEPTFSQWAAAAGTDENTLRRRLNHGVYCKNRMVKSNVRLVI SIAKEHEGPGMEFSDLIQDGMQGLIRGAEKFDASKGFRFSTYSHWWIKQAIRKSVLEQTQ IIRLPAHMAEASSRVKECCRRLGRELKRLPSNEEIAVDTGMTIRRVEAAMSLPKYSVSFT SKVGCTDVTYQEIMPDTSAETAEETLHRWLMKKDVNTALDSLSPREKQVMRYRFGIEGGR ARTLHDIGQLMGVSRERIRQIELGAFRKLRSKNRLQSLQHYLRPAESW

Transcript Sequence

Transcript ID	Zm00001d028585_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:40036028:40038476:1 gene:Zm00001d028585 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sigma70-like-transcription factor 3 description: sigma-like factor2B
Sequence	GCCTCTCTCCGCGCCCATGCTCGTCCACGCGTTCACTTCCACCGCCACGCCGCAAAGAAG AGAGCTAACTCCTGAGCTAGGAATGCTCGTTTGGCCGCGACCCCTGCGACGCGCATTTGT TGAGAGGCGGCCTACTACGAACTACCGTCGATGGCGTTCCTCGCGCCTCCGCAGTTCAAG TGGCCCCTTTCCACCCGTGCGGCGGCGGTGTTCAGGGAGCCCACCGGCGGCGCAGGCTCC CGCCCCAGTCGGATAAACTGTTCTTTCTCCTCCACGGCAGTCGTCGATGCAGAGTGCTTA TCCGTCGGGCCGCCGCCTTCTCCTCACCGAACGCTTCCGGGCTGTTTCGGTGAGGCACTT CTTAACAAGGAGGCAGTGGTGGCGGCCGCGGCCGCGGAAGCCGTCGCTCTGGCTCGCGCA GCGGCCGAGGTCGCCGGAGAAGTCGCCCGGATGGCGCAGAATGATCACCCGGCTGCCTTA CCGCCGCGCGATGACACGGTGGATAGCTTCCTGTCAAGAGAGGTCCTCCGCTCCGAGGTG GGGCTGGATGCCAGGCGCGCCGGGCTCGTCGAAATGCTGGAGGGCGAAGAGCACAGCAGC ATTTTCAGCGACGAATCCGAGGATGACGATGATGGCGGGCATAGCATAGCCGTAACGGTG AAGTCGGCGCGGCGGTCCGAGAGAAGGGCTCGGAGAGTGAGGGCAGCGATGAAGACGGCC AAGTGTTCCAGCAGCATGAAGCCCGTTGGAGCGTCCTCCACAAGGAGGAAACGGTTGAAG GGTTGCCTGACTCCTCTCGGGTGCTTGTACAAGATGACCGGCCCGAGGCTTCTGACGGCG GAACAAGAAGTCGAATTCTCAGAAGGCATTCAGGACCTTCTGAAACTGGAAGCCATCCAA AAGGAGGTTGCGCAGTATAATGCTGGTGAACCAACGTTTTCCCAGTGGGCGGCAGCAGCC GGGACCGATGAGAACACTCTGCGGAGACGCCTGAATCATGGAGTCTACTGCAAGAACAGG ATGGTGAAATCTAACGTGCGGCTTGTAATCTCGATTGCAAAAGAACACGAAGGCCCCGGG ATGGAGTTCTCTGATCTTATTCAGGATGGAATGCAAGGCCTGATAAGAGGCGCGGAAAAG TTCGACGCTTCCAAGGGTTTTAGATTCTCCACTTACTCTCACTGGTGGATTAAACAAGCA ATACGCAAGTCCGTTTTAGAACAAACCCAGATAATCCGCCTGCCGGCACACATGGCTGAA GCGAGTTCCCGAGTGAAGGAATGCTGCCGGCGACTCGGCCGTGAGCTGAAACGGCTCCCC AGCAACGAAGAGATCGCGGTGGACACTGGCATGACGATCCGGCGGGTGGAGGCGGCCATG AGCCTCCCGAAATACAGCGTGTCCTTCACGAGCAAGGTCGGGTGCACGGACGTCACGTAC CAGGAGATCATGCCGGACACGAGCGCCGAGACGGCGGAGGAGACGCTGCACCGGTGGCTG ATGAAGAAGGACGTGAACACGGCGCTGGACAGCCTGAGCCCGCGCGAGAAGCAGGTGATG CGGTACCGGTTCGGCATCGAGGGCGGGCGGGCCAGGACCCTGCACGACATCGGGCAGCTC ATGGGGGTCAGCCGGGAGCGGATCCGGCAGATCGAGCTGGGCGCGTTCCGGAAGCTGCGG AGCAAGAACAGGTTGCAGTCGCTGCAGCACTACCTGCGGCCGGCGGAGAGCTGGTAGCCA TGTCAGGTGCTGCGCTACGACTACGATACGACTTCGACGAGACCATAACCCGCATCGTTG CACATGGCTTTCCATGATGTATGTATGTACGCCGTTCCTATTTACAGGATTTAAAGTATA CGCGTTCGATCCATTTTCTT