Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028579_T032
CDS Infomation	cds chromosome:B73_RefGen_v4:1:39747957:39755416:-1 gene:Zm00001d028579 gene_biotype:protein_coding transcript_biotype:protein_coding description:splicing factor PWI domain-containing protein
Sequence	ATGTCGGGCGGCTTCTTCCGGGGGACGTCCGCTGACCAGGACACGCGCTTCTCGAATAAG CAAGCCAAGCTGCTCAAGACGCAAAAGTTCGCGCCCGAGCTTGACCATCTGGTGGATACG TCAAAGGTAAAGATGGACGTGATGAAGCCCTGGATTGCTAAGCGGGTCACTGAGCTCCTT GGGTTCGAGGACGAAGTTCTCATCAACTTCATTTATGGCCTCCTCGAGGAGAAGGAAGCC GATGGAAAGAAGATTCAGATCCAGCTGACAGGGTTCATGGAGAAGAACACAGTGAAGTTC ATGAGGGAGCTCTGGACCCTCCTTCTCAGTGCACAGCAGAATGCCAGTGGGGTGCCTCAA CAGTTTCTGGATGAAAAAGAGGCTGAGATACAGCAGAAAAAGGCAGAGGATGATAGGATT GCACAGGAGATTCAAAAGAAGCGAGAGATGGAGGAAAATGATTCAGAACTGGATGGGGAT GCTGGTAACTCAAGATCCTATGGCGATCCAGTTGGCTCTGCTTTAAATAGTACAAATTTC AATACCGAGGAAGAAAAGAACAATGATTTCAAGCGTAGCTTAAGAGCAAAGAACAGGGGA AGTCGCAGATCCAGGAGCATATCTTTGTCGCCACGTGCTAGGCAAAGATCCATCTCTCCT AGAAATAATTCTCGTTCTCCTCCTAGGCGTTCCCACTCTATTGATAGACACCATAGATCA TCATGGCGTTCAACTTCACCTAGACGTTCTATTTCTCCCCGAAGGCATTCTCCAAGAAGT ACCCCTTCAATTTCTAGAAGGAGATCACCTTACTCAAGGAGAGGGTCGCCTTCCTTGTCA AGATATCCATCCCCATTTACACGCCGGAGATCTCCTCTTCGCAGAAAATCACCATCATCT GGGCCACTAAGGTCACTTTCTCCTCGCCATCGCCGCTCACCAGCTCGTGTACCAAGGAGG TCACCATCTCCTGCAAGTCGAAGGTCTCCTGTTCGACGCAGATTCTCACCAGGTAGACGT ACATCTCCATCTCCAGTAAGGCGCAGGCCAAGGTCTCCATCACCTGGGAGGCGTAGGCCA AGGTCTCCATCACCTGGGAGGCGTAGGCCAAGGTCCCCATCCCCAAGAAGGCGTAGGCCA AGGTCCCCATCCCCAGGAAGGCGCAGGCCACGGTCCCCATCCCCAGGAAGGCGCAGGCTA CGGTCCCCATCTCCAGGAAGGCGCAGGCCACGGTCCCCATCCCCAGGAAGGCGCAGGCCA CGGTCCCCATCCCCAGGAAGGCGCAGGCCACGGTCCCCATCCCCAGGAAGACGCAGACCA CGATCCCCATCGCCTGGAAGGCGCAGGCCATGGTCTCGGTCTCCAATAAGACGTCAGTCC CCATCTCCAAAACGCCAGAGGACATCACCAAGTTCACCGAAGACTCGTTCTGCAAATCGA CCTTTATCGCCAGAGGGAAGGAGGAGTACCAGTCCGTACAATAGCAGGAGTCCTAATCGC TCTCGCCAGAGTTTAAGTAAAGATACTGAGAAAGAAACAAATGGCACCCCTTCCGTTAAG GACAGAGTTGTGCACTCAAGGGGGCAAGAACAAAAATCAGATGATAATAATAGGGATGGT GCAAGGATTGTTGGCAATAATTCCCCAGATTCTGAGCATAGATTGTCAAAGTCCTTGAGG CCTCCTAACTATGAAGAAAGGAATTCCACACGTGACAGTTCTTACAAGAACTCAGACAAA CCTATACCTAGTCAGGGCAGCACAGATACAAGTGGAGATGAGGAACACAGTCGTGCTAGA GAAAATGCCCGGAAAGCAAATTCATGTCGTAGGAAAACAAAGGATCTCTCGGCAGGTCTG CAACCTAAGAAAATCAGTGCTGGTGACTCAAGCCCCAGAGACAAATCTCCATTCATTTTA CAACAGAGTGGCAAGGTCGTCCAAAAGAAACACCCCGATCAATTGTCAGAATCATCAGAA GATGAGCTTGCTGGTAGAAGAACAAAGCATCAAACTGATTCACCTGATGATTCTCGTCGA AAACAGCATTCCCCGACTAGAATTGAAAATGATGAGTCTTATTCAAAGGGTGGTAGAAAC AGTGAGCATGTCATGAGAGGTTTGCGTGATGATTCTGATGATGCTATTGATACAAAGAAA TATTTGTCTAAAGTCAATGAGGACTCCCAATCGGACGATGGAAGTCCTTTGAAAAAAACT AAGAAAAAAACAGATGGTAATAGGCACATTGATTCTGGTAGTTCAGGGTCTGAAGAGCCT GACAAACATAGAACCCACTCGGAGAAGCGAAGGCACAAGAAAACTCATAAGCATAAGAAA CAGTATGATGATAGTTCCGAGTCTGATTCTGAGCCAGATGGCAAAGACGCAAAGAGGAGG AGGAGGAAGGAAGAGAAGAGGCTAAGAAAAGAGGAAAGACGTCGAAGACGTGAAGAACGA CACCGCAGAAGGGCAGAACGCCATGCCAGCAAACGAAAATTAAAGAACACCGATACTGTT ACAATGCCTTCAGACTCTGAGAAGGATCGGGATTCTGATTCAGATGGTGATGTTAGGAAA AGAGTTTCAAACGCTGGAAGAGAAGAGTCTGATCAGAAGAAACTAGAAATTGAACTCCGT GAGAAGGCCCTTGAATCTCTTAGAGCAAAGAAAGCCATCAACAACTAG

Peptide Sequence

PEP ID	Zm00001d028579_P032
PEP Infomation	pep chromosome:B73_RefGen_v4:1:39747957:39755416:-1 gene:Zm00001d028579 transcript:Zm00001d028579_T032 gene_biotype:protein_coding transcript_biotype:protein_coding description:splicing factor PWI domain-containing protein
Sequence	MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPELDHLVDTSKVKMDVMKPWIAKRVTELL GFEDEVLINFIYGLLEEKEADGKKIQIQLTGFMEKNTVKFMRELWTLLLSAQQNASGVPQ QFLDEKEAEIQQKKAEDDRIAQEIQKKREMEENDSELDGDAGNSRSYGDPVGSALNSTNF NTEEEKNNDFKRSLRAKNRGSRRSRSISLSPRARQRSISPRNNSRSPPRRSHSIDRHHRS SWRSTSPRRSISPRRHSPRSTPSISRRRSPYSRRGSPSLSRYPSPFTRRRSPLRRKSPSS GPLRSLSPRHRRSPARVPRRSPSPASRRSPVRRRFSPGRRTSPSPVRRRPRSPSPGRRRP RSPSPGRRRPRSPSPRRRRPRSPSPGRRRPRSPSPGRRRLRSPSPGRRRPRSPSPGRRRP RSPSPGRRRPRSPSPGRRRPRSPSPGRRRPWSRSPIRRQSPSPKRQRTSPSSPKTRSANR PLSPEGRRSTSPYNSRSPNRSRQSLSKDTEKETNGTPSVKDRVVHSRGQEQKSDDNNRDG ARIVGNNSPDSEHRLSKSLRPPNYEERNSTRDSSYKNSDKPIPSQGSTDTSGDEEHSRAR ENARKANSCRRKTKDLSAGLQPKKISAGDSSPRDKSPFILQQSGKVVQKKHPDQLSESSE DELAGRRTKHQTDSPDDSRRKQHSPTRIENDESYSKGGRNSEHVMRGLRDDSDDAIDTKK YLSKVNEDSQSDDGSPLKKTKKKTDGNRHIDSGSSGSEEPDKHRTHSEKRRHKKTHKHKK QYDDSSESDSEPDGKDAKRRRRKEEKRLRKEERRRRREERHRRRAERHASKRKLKNTDTV TMPSDSEKDRDSDSDGDVRKRVSNAGREESDQKKLEIELREKALESLRAKKAINN

Transcript Sequence

Transcript ID	Zm00001d028579_T032
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:39747957:39755416:-1 gene:Zm00001d028579 gene_biotype:protein_coding transcript_biotype:protein_coding description:splicing factor PWI domain-containing protein
Sequence	CTCCCAACCCGCATTCGCGGCGCGGGCGCCTTGGAACCCTAGTCACCCGCGCCCCCCCTC CACTGTCCACTCAACCCCCGTCCCCTCCCTCGGCGGCGGCGGCATCGGCGTCAACCAAGA TGTCGGGCGGCTTCTTCCGGGGGACGTCCGCTGACCAGGACACGCGCTTCTCGAATAAGC AAGCCAAGCTGCTCAAGACGCAAAAGTTCGCGCCCGAGCTTGACCATCTGGTGGATACGT CAAAGGTAAAGATGGACGTGATGAAGCCCTGGATTGCTAAGCGGGTCACTGAGCTCCTTG GGTTCGAGGACGAAGTTCTCATCAACTTCATTTATGGCCTCCTCGAGGAGAAGGAAGCCG ATGGAAAGAAGATTCAGATCCAGCTGACAGGGTTCATGGAGAAGAACACAGTGAAGTTCA TGAGGGAGCTCTGGACCCTCCTTCTCAGTGCACAGCAGAATGCCAGTGGGGTGCCTCAAC AGTTTCTGGATGAAAAAGAGGCTGAGATACAGCAGAAAAAGGCAGAGGATGATAGGATTG CACAGGAGATTCAAAAGAAGCGAGAGATGGAGGAAAATGATTCAGAACTGGATGGGGATG CTGGTAACTCAAGATCCTATGGCGATCCAGTTGGCTCTGCTTTAAATAGTACAAATTTCA ATACCGAGGAAGAAAAGAACAATGATTTCAAGCGTAGCTTAAGAGCAAAGAACAGGGGAA GTCGCAGATCCAGGAGCATATCTTTGTCGCCACGTGCTAGGCAAAGATCCATCTCTCCTA GAAATAATTCTCGTTCTCCTCCTAGGCGTTCCCACTCTATTGATAGACACCATAGATCAT CATGGCGTTCAACTTCACCTAGACGTTCTATTTCTCCCCGAAGGCATTCTCCAAGAAGTA CCCCTTCAATTTCTAGAAGGAGATCACCTTACTCAAGGAGAGGGTCGCCTTCCTTGTCAA GATATCCATCCCCATTTACACGCCGGAGATCTCCTCTTCGCAGAAAATCACCATCATCTG GGCCACTAAGGTCACTTTCTCCTCGCCATCGCCGCTCACCAGCTCGTGTACCAAGGAGGT CACCATCTCCTGCAAGTCGAAGGTCTCCTGTTCGACGCAGATTCTCACCAGGTAGACGTA CATCTCCATCTCCAGTAAGGCGCAGGCCAAGGTCTCCATCACCTGGGAGGCGTAGGCCAA GGTCTCCATCACCTGGGAGGCGTAGGCCAAGGTCCCCATCCCCAAGAAGGCGTAGGCCAA GGTCCCCATCCCCAGGAAGGCGCAGGCCACGGTCCCCATCCCCAGGAAGGCGCAGGCTAC GGTCCCCATCTCCAGGAAGGCGCAGGCCACGGTCCCCATCCCCAGGAAGGCGCAGGCCAC GGTCCCCATCCCCAGGAAGGCGCAGGCCACGGTCCCCATCCCCAGGAAGACGCAGACCAC GATCCCCATCGCCTGGAAGGCGCAGGCCATGGTCTCGGTCTCCAATAAGACGTCAGTCCC CATCTCCAAAACGCCAGAGGACATCACCAAGTTCACCGAAGACTCGTTCTGCAAATCGAC CTTTATCGCCAGAGGGAAGGAGGAGTACCAGTCCGTACAATAGCAGGAGTCCTAATCGCT CTCGCCAGAGTTTAAGTAAAGATACTGAGAAAGAAACAAATGGCACCCCTTCCGTTAAGG ACAGAGTTGTGCACTCAAGGGGGCAAGAACAAAAATCAGATGATAATAATAGGGATGGTG CAAGGATTGTTGGCAATAATTCCCCAGATTCTGAGCATAGATTGTCAAAGTCCTTGAGGC CTCCTAACTATGAAGAAAGGAATTCCACACGTGACAGTTCTTACAAGAACTCAGACAAAC CTATACCTAGTCAGGGCAGCACAGATACAAGTGGAGATGAGGAACACAGTCGTGCTAGAG AAAATGCCCGGAAAGCAAATTCATGTCGTAGGAAAACAAAGGATCTCTCGGCAGGTCTGC AACCTAAGAAAATCAGTGCTGGTGACTCAAGCCCCAGAGACAAATCTCCATTCATTTTAC AACAGAGTGGCAAGGTCGTCCAAAAGAAACACCCCGATCAATTGTCAGAATCATCAGAAG ATGAGCTTGCTGGTAGAAGAACAAAGCATCAAACTGATTCACCTGATGATTCTCGTCGAA AACAGCATTCCCCGACTAGAATTGAAAATGATGAGTCTTATTCAAAGGGTGGTAGAAACA GTGAGCATGTCATGAGAGGTTTGCGTGATGATTCTGATGATGCTATTGATACAAAGAAAT ATTTGTCTAAAGTCAATGAGGACTCCCAATCGGACGATGGAAGTCCTTTGAAAAAAACTA AGAAAAAAACAGATGGTAATAGGCACATTGATTCTGGTAGTTCAGGGTCTGAAGAGCCTG ACAAACATAGAACCCACTCGGAGAAGCGAAGGCACAAGAAAACTCATAAGCATAAGAAAC AGTATGATGATAGTTCCGAGTCTGATTCTGAGCCAGATGGCAAAGACGCAAAGAGGAGGA GGAGGAAGGAAGAGAAGAGGCTAAGAAAAGAGGAAAGACGTCGAAGACGTGAAGAACGAC ACCGCAGAAGGGCAGAACGCCATGCCAGCAAACGAAAATTAAAGAACACCGATACTGTTA CAATGCCTTCAGACTCTGAGAAGGATCGGGATTCTGATTCAGATGGTGATGTTAGGAAAA GAGTTTCAAACGCTGGAAGAGAAGAGTCTGATCAGAAGAAACTAGAAATTGAACTCCGTG AGAAGGCCCTTGAATCTCTTAGAGCAAAGAAAGCCATCAACAACTAGACTGAGAATTTTT TTGTGACACATTTGAGTTTCTATTTTCAAGTGGAAGTGTCCTTATATGATACTATTTAAT GTTCTGTGTGTTTATGTGGCAGTTGATCTGATGATTCCTGAGCTGTTTACTTGATGCAGC TGAATTCAGGCTTAGCAGCCAGTTATCTGGTAATGTTTGCTTCTACAGATTTGTACGCGA ACCATAACCCT