Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028567_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:39386655:39389622:-1 gene:Zm00001d028567 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 2 description:Protein DA1-related 2
Sequence	ATGTCGCCGCGCACAGAGAGGAGATCCGGTCTCATGAAGTGGCTCTGCAGATTCCTCAAG GGGCCGAAGCCCGGCGAACCGAGCCGCCGGCGGCCCCAGGTGGCGGCCGGAGAAGGGGAG GGCGCGCTTTGGCACCAACGACCAGCTAGACCAAAGATCGATCCACCTAGGAACGAGAAT GAGGAACTAGTGGACCGTGCCATTGCCGAGCCTCTTGCAGAGGCTGTCAAACCGCCCAGA GAGAAAACCCATAGGGGAGAAGACAGCAACGACGACGAAGATCTCACAAGAGCCGTACAG GACAGTCTGAATATGAACCCTTACACGCCTTACAACCCCTATCCACCCTCTCAAGCCCAA CCTATAGGGCACAGGGTATGCGGAGGCTGCAAGCATGAGATAGGGCGTGGCCATTACTTG AGCTGCATGGGCATTTACTGGCACCCTCAGTGCTTCCGCTGCAGGTCCTGCGGTCACCTT ATCCGTGAGACCGAGTTCACCTTGCTGGGTACGGATTCGTACCACAAGCTGTGCTACAAG GAGCTGCATCATCCAAAGTGCGACGTCTGCCTTCAGTTTGTAAGGCCTCGTGTCCTCGGA AAACCTGAGCGATCTGCACTGCAGACTGTGATAAACTGCATCCCAACGAACGGGAGTGGC TTGATAGAGTACAGAGCCCACCCGTTCTGGGGCCAGAAGTATTGCCCTTCGCATGAGCGC GACAGGACGCCACGTTGCTGCAGCTGTGAGAAAATGGAGGTACAGCCAAGGAACACGAAG TACATGTCGCTGGGAGACGGACGCGGCCTGTGCATGGAATGCCTGGGATCTGCAGTGATG GACACGAGCGAGTGCCAGCCTCTGTACCATTCTATCAGAGACTACTACGAGGGGATGGAC ATGAGACTGGACCAGCAGATACCCGTGCTCTTGGTTGAGCGGCAAGCGCTCAACGAAGCC ATGGAAGGGGAGAGTAAAGGCCCACACCACATGCCTGAGACTAGGGGCCTATGTCTGTCC GAGGAGCGGACTGTGAGCAGTATACTTAGGAGGCCCAGAATTGGTGGAAACCGGTTACTA GGCATGAGAACTCGGCCACAGAAGCTGACGAGGAGATGTGAAGTTACTGCAATACTTGTC CTGTATGGCCTCCCCAGGCTACTGACAGGTTCCATCCTCGCCCATGAGCTGATGCACGGG TGGCTGCGCCTCAAAGGTTACCGAAACCTAAACGCGGAGGTGGAAGAAGGCATATGCCAG GTCATGTCTTACTTGTGGCTGGAATCAGAGATTCTTCCGTCATCCTCGAGGCACGCGCAG CCTTCATCATCGTCCTCCTCCTCATCCTATCCAGCAACATCATCCGAGAAAGGTGGAATA TCTCATACCGGGAAGAAGCTGGGCGAGTTCTTCATGCACCAGATTGCCAATGACACGTCG ACGGCCTATGGTGACGGGTTCAGAACTGCGTACGCTGCCGTCAACAAGTATGGCCTTCGC CAAACACTGAGCCATATACGCCTAACAGGAGGCTTCCCTGTATAA

Peptide Sequence

PEP ID	Zm00001d028567_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:39386655:39389622:-1 gene:Zm00001d028567 transcript:Zm00001d028567_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 2 description:Protein DA1-related 2
Sequence	MSPRTERRSGLMKWLCRFLKGPKPGEPSRRRPQVAAGEGEGALWHQRPARPKIDPPRNEN EELVDRAIAEPLAEAVKPPREKTHRGEDSNDDEDLTRAVQDSLNMNPYTPYNPYPPSQAQ PIGHRVCGGCKHEIGRGHYLSCMGIYWHPQCFRCRSCGHLIRETEFTLLGTDSYHKLCYK ELHHPKCDVCLQFVRPRVLGKPERSALQTVINCIPTNGSGLIEYRAHPFWGQKYCPSHER DRTPRCCSCEKMEVQPRNTKYMSLGDGRGLCMECLGSAVMDTSECQPLYHSIRDYYEGMD MRLDQQIPVLLVERQALNEAMEGESKGPHHMPETRGLCLSEERTVSSILRRPRIGGNRLL GMRTRPQKLTRRCEVTAILVLYGLPRLLTGSILAHELMHGWLRLKGYRNLNAEVEEGICQ VMSYLWLESEILPSSSRHAQPSSSSSSSSYPATSSEKGGISHTGKKLGEFFMHQIANDTS TAYGDGFRTAYAAVNKYGLRQTLSHIRLTGGFPV

Transcript Sequence

Transcript ID	Zm00001d028567_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:39386655:39389622:-1 gene:Zm00001d028567 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 2 description:Protein DA1-related 2
Sequence	GTACTGTACATCGACATGCGACATCTTGCTTGGCCTATCTGATCTTTAATGTCGCCGCGC ACAGAGAGGAGATCCGGTCTCATGAAGTGGCTCTGCAGATTCCTCAAGGGGCCGAAGCCC GGCGAACCGAGCCGCCGGCGGCCCCAGGTGGCGGCCGGAGAAGGGGAGGGCGCGCTTTGG CACCAACGACCAGCTAGACCAAAGATCGATCCACCTAGGAACGAGAATGAGGAACTAGTG GACCGTGCCATTGCCGAGCCTCTTGCAGAGGCTGTCAAACCGCCCAGAGAGAAAACCCAT AGGGGAGAAGACAGCAACGACGACGAAGATCTCACAAGAGCCGTACAGGACAGTCTGAAT ATGAACCCTTACACGCCTTACAACCCCTATCCACCCTCTCAAGCCCAACCTATAGGGCAC AGGGTATGCGGAGGCTGCAAGCATGAGATAGGGCGTGGCCATTACTTGAGCTGCATGGGC ATTTACTGGCACCCTCAGTGCTTCCGCTGCAGGTCCTGCGGTCACCTTATCCGTGAGACC GAGTTCACCTTGCTGGGTACGGATTCGTACCACAAGCTGTGCTACAAGGAGCTGCATCAT CCAAAGTGCGACGTCTGCCTTCAGTTTGTAAGGCCTCGTGTCCTCGGAAAACCTGAGCGA TCTGCACTGCAGACTGTGATAAACTGCATCCCAACGAACGGGAGTGGCTTGATAGAGTAC AGAGCCCACCCGTTCTGGGGCCAGAAGTATTGCCCTTCGCATGAGCGCGACAGGACGCCA CGTTGCTGCAGCTGTGAGAAAATGGAGGTACAGCCAAGGAACACGAAGTACATGTCGCTG GGAGACGGACGCGGCCTGTGCATGGAATGCCTGGGATCTGCAGTGATGGACACGAGCGAG TGCCAGCCTCTGTACCATTCTATCAGAGACTACTACGAGGGGATGGACATGAGACTGGAC CAGCAGATACCCGTGCTCTTGGTTGAGCGGCAAGCGCTCAACGAAGCCATGGAAGGGGAG AGTAAAGGCCCACACCACATGCCTGAGACTAGGGGCCTATGTCTGTCCGAGGAGCGGACT GTGAGCAGTATACTTAGGAGGCCCAGAATTGGTGGAAACCGGTTACTAGGCATGAGAACT CGGCCACAGAAGCTGACGAGGAGATGTGAAGTTACTGCAATACTTGTCCTGTATGGCCTC CCCAGGCTACTGACAGGTTCCATCCTCGCCCATGAGCTGATGCACGGGTGGCTGCGCCTC AAAGGTTACCGAAACCTAAACGCGGAGGTGGAAGAAGGCATATGCCAGGTCATGTCTTAC TTGTGGCTGGAATCAGAGATTCTTCCGTCATCCTCGAGGCACGCGCAGCCTTCATCATCG TCCTCCTCCTCATCCTATCCAGCAACATCATCCGAGAAAGGTGGAATATCTCATACCGGG AAGAAGCTGGGCGAGTTCTTCATGCACCAGATTGCCAATGACACGTCGACGGCCTATGGT GACGGGTTCAGAACTGCGTACGCTGCCGTCAACAAGTATGGCCTTCGCCAAACACTGAGC CATATACGCCTAACAGGAGGCTTCCCTGTATAATAAGAGTGACAAAAAAGACACAAAATG TCCATGCATGATCATATCGATATCAAAAGGTTATATACATATTGGGATGAAGTTCGCTAT GGAAGCATAGTGATTCAGTTTCGGTGACCTTGAGTTTTCAAAGAGGTCATGTGTAAGAAC ACTGATTTAGGGGTGGAGGTATGCCGCTTCCGGCATATGATTTCCTCTCACGAA