Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028536_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:1:38520980:38526272:-1 gene:Zm00001d028536 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anthranilate synthase alpha subunit 2 chloroplastic
Sequence

ATGTTGCTATCTAAAGTGCACAATTCCAATGTCCCCACACTCTCTCCTGGATTTGTGAAG
CTGCACACACGCAAGTTTGGTACACCTTTGAACAAGTCGACCATGACAAGTGATGAGTAT
AAGAATGCTGTTCTGCAGGCTAAGGAACATATTATGGCTGGGGATATCTTCCAGATTGTT
TTAAGCCAGAGGTTCGAGAGACGAACATATGCCAACCCATTTGAGGTTTATCGAGCATTA
CGGATTGTGAATCCTAGCCCATACATGGCGTATGTACAGGCAAGAGGCTGTGTATTGGTT
GCGTCTAGTCCTGAAATTCTTACACGAGTCAGTAAGGGGAAGATTATTAATCGACCACTT
GCTGGAACTGTTCGAAGGGGCAAGACAGAGAAGGAAGATCAAATGCAAGAGCAACAACTG
TTAAGTGATGAAAAACAGTGTGCCGAGCACATAATGCTTGTGGACTTGGGAAGGAATGAT
GTTGGCAAGGTATCCAAACCAGGATCAGTGAAGGTGGAGAAGTTGATGAACATTGAGAGA
TACTCCCATGTTATGCACATCAGCTCAACGGTTAGTGGACAGTTGGATGATCATCTCCAG
AGTTGGGATGCCTTGAGAGCTGCCTTGCCCGTTGGAACAGTCAGTGGTGCACCAAAGGTG
AAGGCCATGGAGTTGATTGATAAGTTGGAAGTTACGAGGCGAGGACCATATAGTGGTGGT
CTAGGAGGAATATCGTTTGATGGTGACATGCAAATTGCACTTTCTCTCCGCACCATCGTA
TTCTCAACAGCGCCGAGCCACAACACGATGTACTCATACAAAGACGCAGATAGGCGTCGG
GAGTGGGTCGCTCATCTTCAGGCTGGTGCAGGCATTGTTGCCGACAGTAGCCCAGATGAC
GAACAACGTGAATGCGAGAATAAGGCTGCTGCACTAGCTCGGGCCATCGATCTTGCAGAG
TCAGCTTTTGTAGACAAAGAATAG

Peptide Sequence

PEP ID

Zm00001d028536_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:1:38520980:38526272:-1 gene:Zm00001d028536 transcript:Zm00001d028536_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anthranilate synthase alpha subunit 2 chloroplastic
Sequence

MLLSKVHNSNVPTLSPGFVKLHTRKFGTPLNKSTMTSDEYKNAVLQAKEHIMAGDIFQIV
LSQRFERRTYANPFEVYRALRIVNPSPYMAYVQARGCVLVASSPEILTRVSKGKIINRPL
AGTVRRGKTEKEDQMQEQQLLSDEKQCAEHIMLVDLGRNDVGKVSKPGSVKVEKLMNIER
YSHVMHISSTVSGQLDDHLQSWDALRAALPVGTVSGAPKVKAMELIDKLEVTRRGPYSGG
LGGISFDGDMQIALSLRTIVFSTAPSHNTMYSYKDADRRREWVAHLQAGAGIVADSSPDD
EQRECENKAAALARAIDLAESAFVDKE

Transcript Sequence

Transcript ID

Zm00001d028536_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:38520980:38526272:-1 gene:Zm00001d028536 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anthranilate synthase alpha subunit 2 chloroplastic
Sequence

GACTCCCACCTCCAGCCAAATCGGGCTATAGATCAAACGCTGCACTGTAGGGAGCGTGAA
GCCAGCGGCGAATGGAATCCCTAGCCGCCACCTCCGTGTTCGCGCCCTCCCGCGTCGCCG
TCCCGGCGGCGCGGGCCCTGGTTAGGGCGGGGACGGTGGTACCAACCAGGCGGACGAGCA
GCCGGAGCGGAACCAGCGGGGTGAAATGCTCTGCTGCCGTGACGCCGCAGGCGAGCCCAG
TGATTAGCAGGAGCGCTGCGGCGGCGAAGGCGGCGGAGGAGGACAAGAGGCGGTTCTTCG
AGGCGGCGGCGCGGGGGAGCGGGAAGGGGAACCTGGTGCCCATGTGGGAGTGCATCGTGT
CGGACCATCTCACCCCCGTGCTCGCCTACCGCTGCCTCGTCCCCGAGGACAACGTCGACG
CCCCCAGCTTCCTCTTCGAGTCCGTCGAGCAGGGGCCCCAGGGCACCACCAACGTCGGCC
GCTACAGCATGGTGGGAGCCCACCCAGTGATGGAGATTGTGGCCAAAGACCACAAGGTTA
CGATCATGGACCACGAGAAGAGCCAAGTGACAGAGCAGGTAGTGGACGACCCGATGCAGA
TCCCGAGGACCATGATGGAGGGATGGCACCCACAGCAGATCGACGAGCTCCCTGAATCCT
TCTCCGGTGGATGGGTTGGGTTCTTTTCCTATGATACGGTTAGGTATGTTGAGAAGAAGA
AGCTACCGTTCTCCAGTGCTCCTCAGGACGATAGGAACCTTCCTGATGTGCACTTGGGAC
TCTATGATGATGTTCTAGTCTTCGATAATGTTGAGAAGGTACTATTCAAGAATTTCTGTT
CTCGTTCGTAACTAACTCATGATGTTCTCTGTGTTTCAGAGTATTGTCCTACAGTTGCAG
TTATGATTAAGTATTAATCACTTTGCCTTGGAGCACCAATTTTTTGGAGGCTGAATAAGA
TAGCTAGTAGTTTGATATAGGAAGTTAACTATACTAATTCTAAAGATTATGCATGTAGTT
TGTCAGTGTTTCATCCTATTTTTTTTTCACATCTACAACAGACAGAAACTACACCGGTTG
GTGCATTTAGAAAGTATATGTTATCCATTGGGTCAATGTGGACCGGCATGCATCTGTTGA
GGAAGCATACCAAGATGGCAGGTCCCGACTAAACATGTTGCTATCTAAAGTGCACAATTC
CAATGTCCCCACACTCTCTCCTGGATTTGTGAAGCTGCACACACGCAAGTTTGGTACACC
TTTGAACAAGTCGACCATGACAAGTGATGAGTATAAGAATGCTGTTCTGCAGGCTAAGGA
ACATATTATGGCTGGGGATATCTTCCAGATTGTTTTAAGCCAGAGGTTCGAGAGACGAAC
ATATGCCAACCCATTTGAGGTTTATCGAGCATTACGGATTGTGAATCCTAGCCCATACAT
GGCGTATGTACAGGCAAGAGGCTGTGTATTGGTTGCGTCTAGTCCTGAAATTCTTACACG
AGTCAGTAAGGGGAAGATTATTAATCGACCACTTGCTGGAACTGTTCGAAGGGGCAAGAC
AGAGAAGGAAGATCAAATGCAAGAGCAACAACTGTTAAGTGATGAAAAACAGTGTGCCGA
GCACATAATGCTTGTGGACTTGGGAAGGAATGATGTTGGCAAGGTATCCAAACCAGGATC
AGTGAAGGTGGAGAAGTTGATGAACATTGAGAGATACTCCCATGTTATGCACATCAGCTC
AACGGTTAGTGGACAGTTGGATGATCATCTCCAGAGTTGGGATGCCTTGAGAGCTGCCTT
GCCCGTTGGAACAGTCAGTGGTGCACCAAAGGTGAAGGCCATGGAGTTGATTGATAAGTT
GGAAGTTACGAGGCGAGGACCATATAGTGGTGGTCTAGGAGGAATATCGTTTGATGGTGA
CATGCAAATTGCACTTTCTCTCCGCACCATCGTATTCTCAACAGCGCCGAGCCACAACAC
GATGTACTCATACAAAGACGCAGATAGGCGTCGGGAGTGGGTCGCTCATCTTCAGGCTGG
TGCAGGCATTGTTGCCGACAGTAGCCCAGATGACGAACAACGTGAATGCGAGAATAAGGC
TGCTGCACTAGCTCGGGCCATCGATCTTGCAGAGTCAGCTTTTGTAGACAAAGAATAGTG
TGCTATGGTTATCGTTTAGTTCTTGTTCATGTTTCTTTTACCCACTTTCCGTTAAAAAAA
GATGTCATTAGTGGGTGGAGAAAAGCAATAAGACTGTTCTCTAGAGAACCGAAGAAATAT
GGAAATTGAG