Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028490_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:1:36826447:36841310:1 gene:Zm00001d028490 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase component HRD3A
Sequence	ATGCCTTCCCCGATGGCTCGCGTCCTGCACCGCCGTCTCCTCCTCCTCGCCGCCGTCTCC TTCGCCGTGGTCGCTTCTCTCCTTCGCCCAGCTGCTGCAGTGCGCCCGTTTGTTTTGGTT CTCTCCGGTGAGGACTTCCTCAAGGATTCGGCCGCGCACCCGTCCCTCCCCTCTGCCGAC TCCACCGACGACGACGGGTGGGACGACTTCGCCGACGATTCACCAGCCGCCGACCCGCTC CTCTCCCCGTCCTCCTGGGTCCCTCTTCTTGACCCAGCAAGCCCTCCCCTTTCTGGCGAT GAGACGGACTCGTCGGCCGACGCGCTCTTCGTCGCGGGCGCCCGCGCGATGCTCTCCGCA GCGTCCGATGGGGACGACGCGGCGTTCGCCACGGCTGCCGCGCAGATCGAGGCCGCGGCA GAGGCGGGGCACCCGGGCGCGCAGTCCGCGCTCGCGTTCCTCACCGGCGCCGGGATGACG CGCCCGGCATCCCGATCGCTCGCATTCCTGTTGCACAAGTTCGCCGCCGACGCGGGAGAT CTTCAGTCAAAGATGGCCCTCGCGTACTCCTACTTCCGCCAGGAGATGTATGAAGAAGCT GTTATACTATACGCTGAACTTGCAGAAGCTGCCCTAACTAGCTCCTTGATATCAAAGGAG CCACCAGTGATTGAACCAATCCGTCTTCACAGTGGGACTGAAGAAAATAAAGAGGCCTTG AGGAAGTCCCGAGGCGAGGACGATGAAGATTTTCAAATCACAGAGTACCAGGCACAGCGA GGCAATGCTGCTAACATGTACAAATTAGGGCTTCTGTATTACTATGGACTACGTGGGCTC CGCCGTGATTATGGAAAAGCTTTTCATTGGTTTTCTAAGGCTGTTGAGAAAGGAGAGACA CGAGCATTGGAACTTCTGGGTGAGATCTATGCTAGAGGTGCTGGAGTGGAAAGGAACTAT ACTGAAGCATACAAGTGGTTGGCACTTGCTGCAAAGCAGCAACATTACTCAGCTTACAAT GGATTGGGTTATCTATATGTTAAAGGCTATGGGGTGGAGAAGAAAAACCTGACAAAAGCA AAGGAACTTTTTGAACTTGCAGCCGAGAATAAGGAAGCTGGGGGACATTATAACCTTGGT GTGTTGTATCTTAAGGGTATTGGTGTGAAGAGGGATGTAATTAGAGCATGCAATCTCTTG CTTCATGCAGTTAATGCTGGGCAACCAAAAGCTATTTATCAGGTGGCGAAACTGTTCCAG AAAGGCATTGGTCTTAAGAGGAACCTCCATATGGCAACAATGTTGTACAAGTCTGTTGCT GAGAGGGGACCCTGGAGTTCATTGTCCAGATGGGCTTTGGAATCTTATTTGAAAGGCGAT GTAGGGAAAGCATTGCTCTTGTATTCCAGAATGGCCGATCTTGGATATGAGGTTGCACAG AGCAATGCTGCCTGGATTCTTGATAGGTATGGTGATCAAAGTATTTGCATGGGAGAATCT AGTTTTTGTACAGATATGGAAAGACATCTTCGTGCGCATGCTTTGTGGTGGCAAGCATCC GAGCAGGGTAATGAGCATGCTGCATTGTTGATTGGCGATGCCTACTACTATGGTCGGGGC GTAGCAAGGGACTATGAACGTGCAGCAGAGGCATATATGCATGCTCGGTCACAGTCTAAT GCTCAGGCTATTTTTAACCTTGGGTACATGCATGAGCATGGTCATGGACTTCCCCTTGAT TTGCAC

Peptide Sequence

PEP ID	Zm00001d028490_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:1:36826447:36841310:1 gene:Zm00001d028490 transcript:Zm00001d028490_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase component HRD3A
Sequence	MPSPMARVLHRRLLLLAAVSFAVVASLLRPAAAVRPFVLVLSGEDFLKDSAAHPSLPSAD STDDDGWDDFADDSPAADPLLSPSSWVPLLDPASPPLSGDETDSSADALFVAGARAMLSA ASDGDDAAFATAAAQIEAAAEAGHPGAQSALAFLTGAGMTRPASRSLAFLLHKFAADAGD LQSKMALAYSYFRQEMYEEAVILYAELAEAALTSSLISKEPPVIEPIRLHSGTEENKEAL RKSRGEDDEDFQITEYQAQRGNAANMYKLGLLYYYGLRGLRRDYGKAFHWFSKAVEKGET RALELLGEIYARGAGVERNYTEAYKWLALAAKQQHYSAYNGLGYLYVKGYGVEKKNLTKA KELFELAAENKEAGGHYNLGVLYLKGIGVKRDVIRACNLLLHAVNAGQPKAIYQVAKLFQ KGIGLKRNLHMATMLYKSVAERGPWSSLSRWALESYLKGDVGKALLLYSRMADLGYEVAQ SNAAWILDRYGDQSICMGESSFCTDMERHLRAHALWWQASEQGNEHAALLIGDAYYYGRG VARDYERAAEAYMHARSQSNAQAIFNLGYMHEHGHGLPLDLH

Transcript Sequence

Transcript ID	Zm00001d028490_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:36826447:36841310:1 gene:Zm00001d028490 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase component HRD3A
Sequence	GTGTTCTCGTAGGCTATGCCTTCCCCGATGGCTCGCGTCCTGCACCGCCGTCTCCTCCTC CTCGCCGCCGTCTCCTTCGCCGTGGTCGCTTCTCTCCTTCGCCCAGCTGCTGCAGTGCGC CCGTTTGTTTTGGTTCTCTCCGGTGAGGACTTCCTCAAGGATTCGGCCGCGCACCCGTCC CTCCCCTCTGCCGACTCCACCGACGACGACGGGTGGGACGACTTCGCCGACGATTCACCA GCCGCCGACCCGCTCCTCTCCCCGTCCTCCTGGGTCCCTCTTCTTGACCCAGCAAGCCCT CCCCTTTCTGGCGATGAGACGGACTCGTCGGCCGACGCGCTCTTCGTCGCGGGCGCCCGC GCGATGCTCTCCGCAGCGTCCGATGGGGACGACGCGGCGTTCGCCACGGCTGCCGCGCAG ATCGAGGCCGCGGCAGAGGCGGGGCACCCGGGCGCGCAGTCCGCGCTCGCGTTCCTCACC GGCGCCGGGATGACGCGCCCGGCATCCCGATCGCTCGCATTCCTGTTGCACAAGTTCGCC GCCGACGCGGGAGATCTTCAGTCAAAGATGGCCCTCGCGTACTCCTACTTCCGCCAGGAG ATGTATGAAGAAGCTGTTATACTATACGCTGAACTTGCAGAAGCTGCCCTAACTAGCTCC TTGATATCAAAGGAGCCACCAGTGATTGAACCAATCCGTCTTCACAGTGGGACTGAAGAA AATAAAGAGGCCTTGAGGAAGTCCCGAGGCGAGGACGATGAAGATTTTCAAATCACAGAG TACCAGGCACAGCGAGGCAATGCTGCTAACATGTACAAATTAGGGCTTCTGTATTACTAT GGACTACGTGGGCTCCGCCGTGATTATGGAAAAGCTTTTCATTGGTTTTCTAAGGCTGTT GAGAAAGGAGAGACACGAGCATTGGAACTTCTGGGTGAGATCTATGCTAGAGGTGCTGGA GTGGAAAGGAACTATACTGAAGCATACAAGTGGTTGGCACTTGCTGCAAAGCAGCAACAT TACTCAGCTTACAATGGATTGGGTTATCTATATGTTAAAGGCTATGGGGTGGAGAAGAAA AACCTGACAAAAGCAAAGGAACTTTTTGAACTTGCAGCCGAGAATAAGGAAGCTGGGGGA CATTATAACCTTGGTGTGTTGTATCTTAAGGGTATTGGTGTGAAGAGGGATGTAATTAGA GCATGCAATCTCTTGCTTCATGCAGTTAATGCTGGGCAACCAAAAGCTATTTATCAGGTG GCGAAACTGTTCCAGAAAGGCATTGGTCTTAAGAGGAACCTCCATATGGCAACAATGTTG TACAAGTCTGTTGCTGAGAGGGGACCCTGGAGTTCATTGTCCAGATGGGCTTTGGAATCT TATTTGAAAGGCGATGTAGGGAAAGCATTGCTCTTGTATTCCAGAATGGCCGATCTTGGA TATGAGGTTGCACAGAGCAATGCTGCCTGGATTCTTGATAGGTATGGTGATCAAAGTATT TGCATGGGAGAATCTAGTTTTTGTACAGATATGGAAAGACATCTTCGTGCGCATGCTTTG TGGTGGCAAGCATCCGAGCAGGGTAATGAGCATGCTGCATTGTTGATTGGCGATGCCTAC TACTATGGTCGGGGCGTAGCAAGGGACTATGAACGTGCAGCAGAGGCATATATGCATGCT CGGTCACAGTCTAATGCTCAGGCTATTTTTAACCTTGGGTACATGCATGAGCATGGTCAT GGACTTCCCCTTGATTTGCACTT