Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028477_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:36246318:36256677:1 gene:Zm00001d028477 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate synthase chloroplastic
Sequence	ATGGCCGCGCCCGTGTCGCAGCCGCCGGTGTCCGCCAGGGCGTCCACACGGTTTCTCCCC CGCGGGATAGGCGCGCTCCCGGAGTCCGCTCCCACGTCCCTCCGGTTATCCGTCGGCCGC CGTCGCCGGGCCGCCAGCCTAGAGGTGAAGGCATCGGGAAATGTGTTCGGGAACTACTTC CAGGTTGCAACCTATGGCGAATCCCATGGAGGGGGTGTTGGTTGCGTTATCAGTGGCTGC CCACCCAGAATTCCTCTCACTGAGGCAGACATGCAAGTAGAACTCGATAGAAGACGTCCG GGTCAAAGTAGAATTACAACCCCAAGAAAGGAGACTGATACATGCAAAATTCTATCAGGG ACACATGATGGGATGACTACTGGTACACCAATTCACGTCTTTGTCCCAAACACAGATCAA AGGGGTGGTGATTACAGTGAAATGTCTAAGGCGTACAGACCATCCCATGCAGATGCAACC TATGACTTCAAGTATGGAGTTAGAGCTGTGCAGGGAGGTGGAAGGTCATCAGCCAGAGAA ACCATTGGCAGGGTGGCTGCAGGAGCTCTTGCAAAGAAAATTCTAAAGCTCAAATCAGGA GTGGAGATCTTGGCATTTGTTTCTAAAGTGCACCAAGTCGTACTTCCAGAAGATGCAGTT GATTATGAGACTGTAACCTTGGAACATATAGAGAGCAACATCGTTAGATGTCCTGATCCA GAATATGCAGAGAAGATGATTGCTGCCATTGATACGGTACGAGTTAGAGGAGATTCAATT GGTGGGGTCGTCACATGCATTGCAAGAAATGTTCCTCGTGGTCTTGGCTCTCCTGTTTTT GACAAACTTGAAGCTGAACTGGCAAAAGCCATGCTTTCTCTTCCTGCAAGCAAGGGGTTT GAGATTGGCAGTGGGTTCGCTGGTAAGGAATCATTTTCATTTATGTTCCTGGAAAAAATG GATCATTTTGTTTCCTTGAATACACAAGGAATATGTACATTTTGCACATGA

Peptide Sequence

PEP ID	Zm00001d028477_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:36246318:36256677:1 gene:Zm00001d028477 transcript:Zm00001d028477_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate synthase chloroplastic
Sequence	MAAPVSQPPVSARASTRFLPRGIGALPESAPTSLRLSVGRRRRAASLEVKASGNVFGNYF QVATYGESHGGGVGCVISGCPPRIPLTEADMQVELDRRRPGQSRITTPRKETDTCKILSG THDGMTTGTPIHVFVPNTDQRGGDYSEMSKAYRPSHADATYDFKYGVRAVQGGGRSSARE TIGRVAAGALAKKILKLKSGVEILAFVSKVHQVVLPEDAVDYETVTLEHIESNIVRCPDP EYAEKMIAAIDTVRVRGDSIGGVVTCIARNVPRGLGSPVFDKLEAELAKAMLSLPASKGF EIGSGFAGKESFSFMFLEKMDHFVSLNTQGICTFCT

Transcript Sequence

Transcript ID	Zm00001d028477_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:36246318:36256677:1 gene:Zm00001d028477 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chorismate synthase chloroplastic
Sequence	GCCGTTCTTTCTCCCTCAGACCCTCACCAACCAGGCAACCAAACCTTCTCCGATGGCCGC GCCCGTGTCGCAGCCGCCGGTGTCCGCCAGGGCGTCCACACGGTTTCTCCCCCGCGGGAT AGGCGCGCTCCCGGAGTCCGCTCCCACGTCCCTCCGGTTATCCGTCGGCCGCCGTCGCCG GGCCGCCAGCCTAGAGGTGAAGGCATCGGGAAATGTGTTCGGGAACTACTTCCAGGTTGC AACCTATGGCGAATCCCATGGAGGGGGTGTTGGTTGCGTTATCAGTGGCTGCCCACCCAG AATTCCTCTCACTGAGGCAGACATGCAAGTAGAACTCGATAGAAGACGTCCGGGTCAAAG TAGAATTACAACCCCAAGAAAGGAGACTGATACATGCAAAATTCTATCAGGGACACATGA TGGGATGACTACTGGTACACCAATTCACGTCTTTGTCCCAAACACAGATCAAAGGGGTGG TGATTACAGTGAAATGTCTAAGGCGTACAGACCATCCCATGCAGATGCAACCTATGACTT CAAGTATGGAGTTAGAGCTGTGCAGGGAGGTGGAAGGTCATCAGCCAGAGAAACCATTGG CAGGGTGGCTGCAGGAGCTCTTGCAAAGAAAATTCTAAAGCTCAAATCAGGAGTGGAGAT CTTGGCATTTGTTTCTAAAGTGCACCAAGTCGTACTTCCAGAAGATGCAGTTGATTATGA GACTGTAACCTTGGAACATATAGAGAGCAACATCGTTAGATGTCCTGATCCAGAATATGC AGAGAAGATGATTGCTGCCATTGATACGGTACGAGTTAGAGGAGATTCAATTGGTGGGGT CGTCACATGCATTGCAAGAAATGTTCCTCGTGGTCTTGGCTCTCCTGTTTTTGACAAACT TGAAGCTGAACTGGCAAAAGCCATGCTTTCTCTTCCTGCAAGCAAGGGGTTTGAGATTGG CAGTGGGTTCGCTGGTAAGGAATCATTTTCATTTATGTTCCTGGAAAAAATGGATCATTT TGTTTCCTTGAATACACAAGGAATATGTACATTTTGCACATGACTAGTTGGCGTTGTTTG CATGCAGCCTACTCTACAGTTTGACTAATTCCTAATAACTTGTGCCAAGGTACGGACTTT ACTGGAAGTGAGCATAATGATGAGTTCTATATGGATGAGGCTGGAAATGTGAGGACACGA ACTAATCGCTCAGGCGGTGTTCAGGGAGGGATATCAAATGGTGAAATTATTTACTTCAAA GTGGCTTTTAAGCCAACAGCAACTATCGGAAAGAAGCAAAATACTGTGTCAAGGGAGCAT GAGGATGTTGAACTTTTGGCAAGGGGGCGCCATGACCCCTGTGTTGTCCCTCGAGCTGTT CCTATGGTGGAATCCATGGCTGCGCTGGTCCTGATGGACCAGCTCATGGCGCATATTGCC CAGTGTGAGATGTTTCCGCTGAACCTTGCCCTACAAGAGCCCATTGGCTCTGCTAGCAGT GCATCTGAACTGTCACCAAACCTATCATAATGTTTGTCGTGGAACATGTCCCAGCTTTCC TTCTATCGAAATTCTGGTCTTTGCTAAGCAGTTTGCAATTCGGAACCCCCATAAACCCTC GACTATTGTACCTAGAGATAAAGTGAACGGATATCAAGATAGAAATGCATTAATGTTTTT GTGATGTGTAGTATAACTGATATTTACCCCTTTTCTTTTTTTGAGAGAGGACGCATGATG TCGTTTGAGCAATAAAGTTTAATTTGGGAG