Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028475_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:36212146:36216035:1 gene:Zm00001d028475 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase LOG2
Sequence	ATGGGCAACGCGGGTAGCAACGGTGGAGGCGCTGCCGCTGGTCACCGCCGTCGGAGCTCC GGCCACGGCCACCACCACCAGGCGCCGCCGCCTCACCAGCCGCAGGAGACTGCGGCCAAC CGCTACGTGTTCGCGGCCGCCACGCCGTACCCGCCCCAGTACCCTAACCCCAACCCGCCG CAGTACTACCCGCAGTACGGGAACTACTACCCACCACCACCACCATCCGTGCCGGTGCCC CTTCCGGCGCCGTACGACCACCACCACAGGCCACCCACCGCCGCCCCCGGCGAGTTCCCG CCCCCGCCCCTCACCCACCCCCACCACTACCCTGGCTGGGCTGGGCGGTATCCCTCCTAC GGACAACATCTGCCTATGCCCACTCCCTACGTTGAGCACCAGAAGGCCGTCACTATCCGC AACGACGTCAACCTTAAGAAGGAGACGCTTAGGATCGAGCCTGATGAAGAGTGCCCTGGC CACTTCCTCGTTGCCTTCACCTTTGACGCCACGGTCGCTGGCAGCATGACTGTTTACTTG TTTGCAAAGGAAGAGCTCAACTGCAATCTAACAGCAGTGAAAGAAGACCTAATGAAGCCC GTTACTGTTAGCTTCAAAGAGGGTCTTGGTCAAAAATTCAGGCAACCTTCAGGAACAGGA ATTGACTTTTCAGTGTTTGAAGAATCAGATTTATTAAAGCAGGGGGACATGGATGTATAT CCACTTGCAGTTAAAGCTGAAACAACATTGCTTGTTGATCACCCACCAGAAGGGGATGAC CAAAAGATGAAAACTCCTAACTCACAGATCACCCAGGCCGTGTTTGAAAAGAAAGAAAAT GGGGATTATCATGTAAGAGTTGTTTGCCAGATCCTTTGGGTCAATGGAACTAGGTATGAA CTGCAAGAAATATATGGCATAGGGAACTCCGTGGAAGGTGATGCTGATGCAAATGATCCA GGGAAAGAATGTGTTATTTGCCTCTCAGAACCAAGGGATACTACTGTCCTCCCATGTAGG CATATGTGCATGTGCAGTGAGTGCGCCAAGGTCCTGAGGTACCAAACCACTCGGTGCCCC ATCTGCAGGCAGCCTGTTGAGCGTCTCCTCGAGATCAAAGTGAACAACAAATCTGAAGAT CAGCAACAGATGCCCCAATCGCCACCGCTCCCAGCACTGGATCCGCAGCAGGAAGAGGTG TAG

Peptide Sequence

PEP ID	Zm00001d028475_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:36212146:36216035:1 gene:Zm00001d028475 transcript:Zm00001d028475_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase LOG2
Sequence	MGNAGSNGGGAAAGHRRRSSGHGHHHQAPPPHQPQETAANRYVFAAATPYPPQYPNPNPP QYYPQYGNYYPPPPPSVPVPLPAPYDHHHRPPTAAPGEFPPPPLTHPHHYPGWAGRYPSY GQHLPMPTPYVEHQKAVTIRNDVNLKKETLRIEPDEECPGHFLVAFTFDATVAGSMTVYL FAKEELNCNLTAVKEDLMKPVTVSFKEGLGQKFRQPSGTGIDFSVFEESDLLKQGDMDVY PLAVKAETTLLVDHPPEGDDQKMKTPNSQITQAVFEKKENGDYHVRVVCQILWVNGTRYE LQEIYGIGNSVEGDADANDPGKECVICLSEPRDTTVLPCRHMCMCSECAKVLRYQTTRCP ICRQPVERLLEIKVNNKSEDQQQMPQSPPLPALDPQQEEV

Transcript Sequence

Transcript ID	Zm00001d028475_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:36212146:36216035:1 gene:Zm00001d028475 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable E3 ubiquitin-protein ligase LOG2
Sequence	CCCCGATTTCTTTTGGTTTATTTGTGCGAGTTTTCTCAAGAGCAGAAAAGGCTGTTTGCA ATTCCGGTGCACTCAGGCCTCAAGATCCAACTCTGAGGCCTTTCCCGCGCTATCCGCATC GATCTACGCAAGAGGATGGGCAACGCGGGTAGCAACGGTGGAGGCGCTGCCGCTGGTCAC CGCCGTCGGAGCTCCGGCCACGGCCACCACCACCAGGCGCCGCCGCCTCACCAGCCGCAG GAGACTGCGGCCAACCGCTACGTGTTCGCGGCCGCCACGCCGTACCCGCCCCAGTACCCT AACCCCAACCCGCCGCAGTACTACCCGCAGTACGGGAACTACTACCCACCACCACCACCA TCCGTGCCGGTGCCCCTTCCGGCGCCGTACGACCACCACCACAGGCCACCCACCGCCGCC CCCGGCGAGTTCCCGCCCCCGCCCCTCACCCACCCCCACCACTACCCTGGCTGGGCTGGG CGGTATCCCTCCTACGGACAACATCTGCCTATGCCCACTCCCTACGTTGAGCACCAGAAG GCCGTCACTATCCGCAACGACGTCAACCTTAAGAAGGAGACGCTTAGGATCGAGCCTGAT GAAGAGTGCCCTGGCCACTTCCTCGTTGCCTTCACCTTTGACGCCACGGTCGCTGGCAGC ATGACTGTTTACTTGTTTGCAAAGGAAGAGCTCAACTGCAATCTAACAGCAGTGAAAGAA GACCTAATGAAGCCCGTTACTGTTAGCTTCAAAGAGGGTCTTGGTCAAAAATTCAGGCAA CCTTCAGGAACAGGAATTGACTTTTCAGTGTTTGAAGAATCAGATTTATTAAAGCAGGGG GACATGGATGTATATCCACTTGCAGTTAAAGCTGAAACAACATTGCTTGTTGATCACCCA CCAGAAGGGGATGACCAAAAGATGAAAACTCCTAACTCACAGATCACCCAGGCCGTGTTT GAAAAGAAAGAAAATGGGGATTATCATGTAAGAGTTGTTTGCCAGATCCTTTGGGTCAAT GGAACTAGGTATGAACTGCAAGAAATATATGGCATAGGGAACTCCGTGGAAGGTGATGCT GATGCAAATGATCCAGGGAAAGAATGTGTTATTTGCCTCTCAGAACCAAGGGATACTACT GTCCTCCCATGTAGGCATATGTGCATGTGCAGTGAGTGCGCCAAGGTCCTGAGGTACCAA ACCACTCGGTGCCCCATCTGCAGGCAGCCTGTTGAGCGTCTCCTCGAGATCAAAGTGAAC AACAAATCTGAAGATCAGCAACAGATGCCCCAATCGCCACCGCTCCCAGCACTGGATCCG CAGCAGGAAGAGGTGTAGCCATGATCAAAGTCAGTTCTGAAACATTATATGGCTCTCGTT TGCGGACCTTCAGGCCTTCCCTAAAGGTTTGTTCTCTCATTTGAGCAATGGGGAATGTAA CTGGTACTTTACCTTTACGTATGTAAGGTTCTGGCATGGCTTTGCCGACCTCTGCTGTAT CTGCCTATCTGGAGGTGGGAGACCAAGATGCCAAGAAGAGTGTGTACCATATATACACCA TGCATGCGTGTGCCATGGCTACCTTAAGAAGCGTAGCGAGGAGGATTCCTCATTTCTGGT TGACTTCCTCCAGGAAACCAGGGGAAGAGAAGGTTGTCTCATAAATTTGTACAAAAAATG ACTATTTCACCTTGATTACATGCCTTCTCTGTTATGCCCTGAAAAGTCGATGATTATTTT CCTTGTGCCAGTCATAAAACATTCCAAGTGCAATAGCTCGTCTGGTGGTGAGAGATTT