Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028464_T037
CDS Infomation	cds chromosome:B73_RefGen_v4:1:35768279:35785612:1 gene:Zm00001d028464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	ATGCAGCCGCCGTTGCAGGCGCAGGGAGCAATGGCTAACGTCGCCGCTATCCTCACCGTC CCCTGCTCCGCGGGCCGCCGCCCGAAGCGGAGCAGCCAGCCCCGCGGATGCGGCTCCGTC TCCGTCTCCGTCTCCGTCCGTGCGTCCTCCGGCGCAAACACGGTGACTCTGCTGGACTAC GGCGCGGGGAACGTACGCAGCGTGCGCAACGCAATTCGCTACCTCGGCTTCGACATCCGC GACGTGCAGAGCCCGGAGGACATCGTCGCCGCGGAACGGCTCGTCTTTCCCGGTGTCGGC GCCTTCGGCTCCGCCATGGACGTCCTCAACAGGACGGGCATGGCCAACGCACTCCGTGAG TACATCCAAAGGGACCGCCCCTTCCTAGGCATCTGCCTCGGTCTCCAGCTGCTCTTCGAT TCCAGCGAGGAGAACGGCCCGGTGAGCGGCCTCGGTGTGATACCAGGCGTGGTCAGGCGA TTCGACTCCTCAAATGGCCTCATAGTTCCACATATTGGCTGGAACGCTCTCCAGATCACC AAGGACACACCACTGTTGCAGGGAGCTGATGGCCAGCATGTGTACTTTGTTCACTCCTAC CGCGTACTGCCTTCAGATGCTAATAGAAACTGGATTTCCTCCATATGCAACTATGGTGAC AGCTTTATATCCTCCATCTCAATGGGCAACATTCAGGCAGTTCAATTTCACCCAGAAAAG AGTGGAGCTACCGGACTTTCTATTCTAAAAGAATTTCTCAGACCTAACTCTCTTGGGACC AAGGTCCCAGCACGTAGGAAAGCATCAAAACTTGCGAAGAGAGTGATAGCATGCCTTGAT GTTCGTTCAAATGATAAAGGAGATCTTGTGGTAACAAAAGGCGATCAATATGATGTAAGA GATCATACTAGCAGCAAAGAGGTAAGAAACCTTGGCAAGCCAGTCGATTTAGCAAGCCAG TACTACATAGACGGTGCTGATGAGGTCAGCTTCTTGAATATAACTGGTTTCCGTGACTTT CCATTGGGTGATTTGCCAATGCTAGAGGTACTGCGTTGTGCCTCTGAAAAGGTTTTTGTG CCACTTACAGTTGGTGGGGGCATACGAGACTTCACAGATGCAAATGGAAGATACTACTCA AGTTTGGAGGTAGCATCAGAATATTTCAGGTCCGGTGCTGACAAAATTTCAATTGGAAGT GATGCTGTTTATGCTGCTGAAGCCTTTTTACAGACTGGTGTAAAGACAGGGAAAAGCAGC TTGGAGCAAATCTCTAGAGTATATGGCAATCAGGCTGTAGTTGTCAGTATTGATCCTCGA CGGGTATATGTCAAAAGTCAAGAAGATGTGCCATTTAAAACTGTAAAGGTGTCCACTAAA GGTCCATCGGGAGAAGAATATGCATGGTACCAGTGCACAGTGAATGGTGGACGTGATAGC CGAGCTATAGGAGCATATGAACTAGCGAAAGCTGTGGAAGAATTGGGCGCAGGAGAAATA CTTCTTAACTGCATTGATTGTGATGGCCAAGGTTGTGGATTTGACATAGATTTGGTTAAA ATGGTTTCTGATGCTGTGACAATCCCTGTCATTGCGAGCAGTGGTGCTGGAGCTGTTCAA CATTTTTCTGAAATTTTTGAGAAAACAAATGCTTCTGCTGCCCTTGCTGCTGGCATTTTC CACCGGAAAGAGGTTCCTATACTAGCAGTGAAAGAGCATCTGGTCAATGCTGGTGTGGAG GTCAGGGTGTAA

Peptide Sequence

PEP ID	Zm00001d028464_P037
PEP Infomation	pep chromosome:B73_RefGen_v4:1:35768279:35785612:1 gene:Zm00001d028464 transcript:Zm00001d028464_T037 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	MQPPLQAQGAMANVAAILTVPCSAGRRPKRSSQPRGCGSVSVSVSVRASSGANTVTLLDY GAGNVRSVRNAIRYLGFDIRDVQSPEDIVAAERLVFPGVGAFGSAMDVLNRTGMANALRE YIQRDRPFLGICLGLQLLFDSSEENGPVSGLGVIPGVVRRFDSSNGLIVPHIGWNALQIT KDTPLLQGADGQHVYFVHSYRVLPSDANRNWISSICNYGDSFISSISMGNIQAVQFHPEK SGATGLSILKEFLRPNSLGTKVPARRKASKLAKRVIACLDVRSNDKGDLVVTKGDQYDVR DHTSSKEVRNLGKPVDLASQYYIDGADEVSFLNITGFRDFPLGDLPMLEVLRCASEKVFV PLTVGGGIRDFTDANGRYYSSLEVASEYFRSGADKISIGSDAVYAAEAFLQTGVKTGKSS LEQISRVYGNQAVVVSIDPRRVYVKSQEDVPFKTVKVSTKGPSGEEYAWYQCTVNGGRDS RAIGAYELAKAVEELGAGEILLNCIDCDGQGCGFDIDLVKMVSDAVTIPVIASSGAGAVQ HFSEIFEKTNASAALAAGIFHRKEVPILAVKEHLVNAGVEVRV

Transcript Sequence

Transcript ID	Zm00001d028464_T037
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:35768279:35785612:1 gene:Zm00001d028464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rho GTPase activation protein (RhoGAP) with PH domain
Sequence	ACGATCTCCCCGGGCCCCGGCGCCGCCGTACGTCCCCCTTCGGCGTCGCCAGCCGCCTCC TGGCTCCGGCTCCTTCATCGCCTGCTCCAGCGTGCCTGCGTGACATAAGCGTCGATTGAT TGGCGAGAAAGGGGACGAATGCAGCCGCCGTTGCAGGCGCAGGGAGCAATGGCTAACGTC GCCGCTATCCTCACCGTCCCCTGCTCCGCGGGCCGCCGCCCGAAGCGGAGCAGCCAGCCC CGCGGATGCGGCTCCGTCTCCGTCTCCGTCTCCGTCCGTGCGTCCTCCGGCGCAAACACG GTGACTCTGCTGGACTACGGCGCGGGGAACGTACGCAGCGTGCGCAACGCAATTCGCTAC CTCGGCTTCGACATCCGCGACGTGCAGAGCCCGGAGGACATCGTCGCCGCGGAACGGCTC GTCTTTCCCGGTGTCGGCGCCTTCGGCTCCGCCATGGACGTCCTCAACAGGACGGGCATG GCCAACGCACTCCGTGAGTACATCCAAAGGGACCGCCCCTTCCTAGGCATCTGCCTCGGT CTCCAGCTGCTCTTCGATTCCAGCGAGGAGAACGGCCCGGTGAGCGGCCTCGGTGTGATA CCAGGCGTGGTCAGGCGATTCGACTCCTCAAATGGCCTCATAGTTCCACATATTGGCTGG AACGCTCTCCAGATCACCAAGGACACACCACTGTTGCAGGGAGCTGATGGCCAGCATGTG TACTTTGTTCACTCCTACCGCGTACTGCCTTCAGATGCTAATAGAAACTGGATTTCCTCC ATATGCAACTATGGTGACAGCTTTATATCCTCCATCTCAATGGGCAACATTCAGGCAGTT CAATTTCACCCAGAAAAGAGTGGAGCTACCGGACTTTCTATTCTAAAAGAATTTCTCAGA CCTAACTCTCTTGGGACCAAGGTCCCAGCACGTAGGAAAGCATCAAAACTTGCGAAGAGA GTGATAGCATGCCTTGATGTTCGTTCAAATGATAAAGGAGATCTTGTGGTAACAAAAGGC GATCAATATGATGTAAGAGATCATACTAGCAGCAAAGAGGTAAGAAACCTTGGCAAGCCA GTCGATTTAGCAAGCCAGTACTACATAGACGGTGCTGATGAGGTCAGCTTCTTGAATATA ACTGGTTTCCGTGACTTTCCATTGGGTGATTTGCCAATGCTAGAGGTACTGCGTTGTGCC TCTGAAAAGGTTTTTGTGCCACTTACAGTTGGTGGGGGCATACGAGACTTCACAGATGCA AATGGAAGATACTACTCAAGTTTGGAGGTAGCATCAGAATATTTCAGGTCCGGTGCTGAC AAAATTTCAATTGGAAGTGATGCTGTTTATGCTGCTGAAGCCTTTTTACAGACTGGTGTA AAGACAGGGAAAAGCAGCTTGGAGCAAATCTCTAGAGTATATGGCAATCAGGCTGTAGTT GTCAGTATTGATCCTCGACGGGTATATGTCAAAAGTCAAGAAGATGTGCCATTTAAAACT GTAAAGGTGTCCACTAAAGGTCCATCGGGAGAAGAATATGCATGGTACCAGTGCACAGTG AATGGTGGACGTGATAGCCGAGCTATAGGAGCATATGAACTAGCGAAAGCTGTGGAAGAA TTGGGCGCAGGAGAAATACTTCTTAACTGCATTGATTGTGATGGCCAAGGTTGTGGATTT GACATAGATTTGGTTAAAATGGTTTCTGATGCTGTGACAATCCCTGTCATTGCGAGCAGT GGTGCTGGAGCTGTTCAACATTTTTCTGAAATTTTTGAGAAAACAAATGCTTCTGCTGCC CTTGCTGCTGGCATTTTCCACCGGAAAGAGGTTCCTATACTAGCAGTGAAAGAGCATCTG GTCAATGCTGGTGTGGAGGTCAGGGTGTAACAGGGAGATCCTTCGGTTTATTGAAATATT CTTGTTTGATGTCACAACTGCTATCAGTTCTGTTTCTCTGATGTCGCAACTGCTATCAGA TCTGTTGGTGGCAGCTGGCAGTGCATAGGCCCCTGTCGAGAACTGCAGTTTGGTAATAAA TTAATAATGTGATGCTTAACAGATTAAGCATCCGCTTCTTTTGCTTGTGTTTCTATTTCC CGGTGTGGATTGACCGCCTCCGACCTGTCTTGCGTCATATTCGTCAGCTTTGTAGCATGT TAATGTTGGAGGCCACGTTGC