Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028429_T020
CDS Infomation

cds chromosome:B73_RefGen_v4:1:34709750:34713117:-1 gene:Zm00001d028429 gene_biotype:protein_coding transcript_biotype:protein_coding description:HVA22-like protein i
Sequence

ATGCCAATTTCCTGTAGGCTGGCTTTTGGCTATGCCTATCCTGCCTATGAATGCTACAAG
ACCGTTGAACTGAACAAACCACAGATTGAGCAGCTCATATTTTGGTGTCAGTATTGGATT
TTAGTTGCCCTGTTGACAGTTTTGGAGAGATTTGGAGATTTTACAATATCATGGCTACCG
TTTTACTCAGAAGCAAAGGTGTTGTTCTTTGTATATTTGTGGTACCCTAAGACAAAGGGA
ACTACGTATGTTTATGGAACTTTCTTTAAGCCATATATTTCTCAGCATGAGAATGAAATC
GACCGAAATCTTCTTGAGCTCAGAGCTCGAGCCACCGATATGGTTGTCCTTTACTTCCAT
AAGGCTGCTTCGGTAGGGCAAAATACTTTCTTTGACGTTTTAAAATATGTTGCTGCCCAG
TCCCCTTCTCGGAAATCAAGGCTGCACCCTCATCAGGAACCACAGCAGCAGCAACCACAA
GTGCAGGTGGAGCTGCAGCAGCCGCAACCACAAAAACAAGCAGCACCTGTTATGCGCAGA
GGAGCATCTATTGCTGCTCGGCAAGCAGCAATGGCACAGCAATCTCTGGAGACTATACCC
GTTCCATCTTCACCCAAGATCAAGCGTCAAACATCAGGGAGACCTGGTTCGGTGGCATCC
ACAAAGCCTGCAGCAGCTGCATCCACACCAAAACCTGGCGGTAGCCCAAAGAAAGGTGAG
GTCAAACCTGCTGTCGACCCAGTTCAAACTCCAGCCACAAGTGCAGATTCACCAAAATCC
GAGCCTAGTGCCCCACCACTTTCTGAGACCGAAGAAGTAGACAACATGGCAATCGATGAG
GTCAGTGGTGATGCTGCAGAGGGCGCGGAAGAGCTTGACCCTGCGCTCGAGGAGACGCCG
ATGGAGGAGACGATCCGTGTGACGCGCGCCAAGCTAAGGAGGCGCACGGCCACCGAGGAT
TCTGCTGGGAATTAG

Peptide Sequence

PEP ID

Zm00001d028429_P020
PEP Infomation

pep chromosome:B73_RefGen_v4:1:34709750:34713117:-1 gene:Zm00001d028429 transcript:Zm00001d028429_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:HVA22-like protein i
Sequence

MPISCRLAFGYAYPAYECYKTVELNKPQIEQLIFWCQYWILVALLTVLERFGDFTISWLP
FYSEAKVLFFVYLWYPKTKGTTYVYGTFFKPYISQHENEIDRNLLELRARATDMVVLYFH
KAASVGQNTFFDVLKYVAAQSPSRKSRLHPHQEPQQQQPQVQVELQQPQPQKQAAPVMRR
GASIAARQAAMAQQSLETIPVPSSPKIKRQTSGRPGSVASTKPAAAASTPKPGGSPKKGE
VKPAVDPVQTPATSADSPKSEPSAPPLSETEEVDNMAIDEVSGDAAEGAEELDPALEETP
MEETIRVTRAKLRRRTATEDSAGN

Transcript Sequence

Transcript ID

Zm00001d028429_T020
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:34709750:34713117:-1 gene:Zm00001d028429 gene_biotype:protein_coding transcript_biotype:protein_coding description:HVA22-like protein i
Sequence

ACGGCGGACGTGCTCGCCTCTCCTCTCCTCACATATCCCTCTCCTGCAAGGTTTCTTTGC
GGTATGGTCGGTTCTCTGTGGTTTCTCTTCTGAATGTGCTGGTGCGGTGATGTTGTTTTG
ATTTGTGTTCGCTTTGGCGGATCTGGTCGCGCACAGAGTGGCCGGAGAAGATGATGGGCG
GGCATTTGATATGCCAATTTCCTGTAGGCTGGCTTTTGGCTATGCCTATCCTGCCTATGA
ATGCTACAAGACCGTTGAACTGAACAAACCACAGATTGAGCAGCTCATATTTTGGTGTCA
GTATTGGATTTTAGTTGCCCTGTTGACAGTTTTGGAGAGATTTGGAGATTTTACAATATC
ATGGCTACCGTTTTACTCAGAAGCAAAGGTGTTGTTCTTTGTATATTTGTGGTACCCTAA
GACAAAGGGAACTACGTATGTTTATGGAACTTTCTTTAAGCCATATATTTCTCAGCATGA
GAATGAAATCGACCGAAATCTTCTTGAGCTCAGAGCTCGAGCCACCGATATGGTTGTCCT
TTACTTCCATAAGGCTGCTTCGGTAGGGCAAAATACTTTCTTTGACGTTTTAAAATATGT
TGCTGCCCAGTCCCCTTCTCGGAAATCAAGGCTGCACCCTCATCAGGAACCACAGCAGCA
GCAACCACAAGTGCAGGTGGAGCTGCAGCAGCCGCAACCACAAAAACAAGCAGCACCTGT
TATGCGCAGAGGAGCATCTATTGCTGCTCGGCAAGCAGCAATGGCACAGCAATCTCTGGA
GACTATACCCGTTCCATCTTCACCCAAGATCAAGCGTCAAACATCAGGGAGACCTGGTTC
GGTGGCATCCACAAAGCCTGCAGCAGCTGCATCCACACCAAAACCTGGCGGTAGCCCAAA
GAAAGGTGAGGTCAAACCTGCTGTCGACCCAGTTCAAACTCCAGCCACAAGTGCAGATTC
ACCAAAATCCGAGCCTAGTGCCCCACCACTTTCTGAGACCGAAGAAGTAGACAACATGGC
AATCGATGAGGTCAGTGGTGATGCTGCAGAGGGCGCGGAAGAGCTTGACCCTGCGCTCGA
GGAGACGCCGATGGAGGAGACGATCCGTGTGACGCGCGCCAAGCTAAGGAGGCGCACGGC
CACCGAGGATTCTGCTGGGAATTAGCTGCATGCCGTTGTTTTCCCTGCACATTGTATTGA
TCTTTTTCCGAGTTTTAGGCTCACATGTTGTTTGCTGGAATGGAGATATGTTGT