Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028424_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:1:34542550:34546448:1 gene:Zm00001d028424 gene_biotype:protein_coding transcript_biotype:protein_coding description:Immature colon carcinoma transcript 1 protein

Sequence

ATGGCGACCGCCATGCGGGGCAGCAGCCTCCTGCGGTTCGGTTTCCGCCATCCTTCCTGC
CTCCTGTTCCAGTCCCCTCGGTGTCCTGCCCCGAGCCTGGGTCTGAACCTGGCCGTTGGC
CGCACCGGGCTTATACGCCTCCGATGCTCGGCGGCCGGGGCCGGCGACGCCGGTGGAAAG
AAGGTGTCGGCTCGGCTGGCTCTGACGCAGCAGGTGCTGCGGAACGCCGAGGAGCGCGCC
GCGTCGGCGGGTTCGGACCCTGCCCCCAAGATCACCCTGGATCATGTTACTGTTAATTTT
GCAAGAAGTGGTGGTCCTGGTGGTCAGAATGTTAACAAAGTTAACACAAAGGTTGACATG
CGATTCAATGTTAAGGAAGCTCACTGGCTTGGGGAGAGAATCAAGGAACGGATATTACAA
GCGGAGAAGAATAGGATAAATAAAGATGGAGAGCTTGTTATATCTTCTACAAAAACTAGA
ACACAGAAGGGCAATATTGAAGATGCATTGCAGAAAATACAGGCAATCATTGATGCTGCA
TCATATGTTCCTCCACCCCCAACAGAAGACCAAAAGAAAAAGATTGAAAAAATTGCTGCA
GTTGCTGAAAGGAAGAGACTTCAGAATAAGAAGGTGCTTTCACAGAAGAAGGAATTTAGA
CGGAACAGAACTAGCTGGGATTGA

Peptide Sequence

PEP ID

Zm00001d028424_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:1:34542550:34546448:1 gene:Zm00001d028424 transcript:Zm00001d028424_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Immature colon carcinoma transcript 1 protein

Sequence

MATAMRGSSLLRFGFRHPSCLLFQSPRCPAPSLGLNLAVGRTGLIRLRCSAAGAGDAGGK
KVSARLALTQQVLRNAEERAASAGSDPAPKITLDHVTVNFARSGGPGGQNVNKVNTKVDM
RFNVKEAHWLGERIKERILQAEKNRINKDGELVISSTKTRTQKGNIEDALQKIQAIIDAA
SYVPPPPTEDQKKKIEKIAAVAERKRLQNKKVLSQKKEFRRNRTSWD

Transcript Sequence

Transcript ID

Zm00001d028424_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:34542550:34546448:1 gene:Zm00001d028424 gene_biotype:protein_coding transcript_biotype:protein_coding description:Immature colon carcinoma transcript 1 protein

Sequence

GAGCTCTCTAGTTCCGCCGCTCGCTAGTCGCCTTCCTCCCAAATGGCGACCGCCATGCGG
GGCAGCAGCCTCCTGCGGTTCGGTTTCCGCCATCCTTCCTGCCTCCTGTTCCAGTCCCCT
CGGTGTCCTGCCCCGAGCCTGGGTCTGAACCTGGCCGTTGGCCGCACCGGGCTTATACGC
CTCCGATGCTCGGCGGCCGGGGCCGGCGACGCCGGTGGAAAGAAGGTGTCGGCTCGGCTG
GCTCTGACGCAGCAGGTGCTGCGGAACGCCGAGGAGCGCGCCGCGTCGGCGGGTTCGGAC
CCTGCCCCCAAGATCACCCTGGATCATGTTACTGTTAATTTTGCAAGAAGTGGTGGTCCT
GGTGGTCAGAATGTTAACAAAGTTAACACAAAGGTTGACATGCGATTCAATGTTAAGGAA
GCTCACTGGCTTGGGGAGAGAATCAAGGAACGGATATTACAAGCGGAGAAGAATAGGATA
AATAAAGATGGAGAGCTTGTTATATCTTCTACAAAAACTAGAACACAGAAGGGCAATATT
GAAGATGCATTGCAGAAAATACAGGCAATCATTGATGCTGCATCATATGTTCCTCCACCC
CCAACAGAAGACCAAAAGAAAAAGATTGAAAAAATTGCTGCAGTTGCTGAAAGGAAGAGA
CTTCAGAATAAGAAGGTGCTTTCACAGAAGAAGGAATTTAGACGGAACAGAACTAGCTGG
GATTGATGCAAGCTTGTTCTCGGGGTAGCAAAAGCATTCGGCTGATCCTTACAGCAGTGG
TGTACAGAGACCGACGAAAAACAAGGGTCAGACTTGCTGAAGGCATCTTGGTGAAGAAGA
TATAGCTAAGTTTCGTAGGCATCTCCAGTTTTTGTTTCGTCTATTAGTAGGGATGGATTC
GGATCGGATACTCATGGAAACAGATCCGAACGTCACTATTTACCATATTTTAATCCGAAT
ACGAATACTATCGGATACGAATACAAAACGGATAGTTCG