Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028388_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:32948302:32950299:-1 gene:Zm00001d028388 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein

Sequence

ATGCACGCATCGCGGAGCCACCTCCCCACGTCCGGCGAGTCTCTCCTCCGCCTTTTGGCC
GCCTGCCGTGCACCCGCCCACCTCCCATCCCTGCGCGCCGCGCACGCGCGGCTCCTCGTG
CTGCTCCACCCTTCTCACCCATCCGCGGCACACGCTAACGTCAAACTCATCCAAGCCTAC
GCTGCCTGCTCCGCGCTCCCCTTGGCGCACACCGTGCTCGAGTCCTCCTCCCCCGACGGC
AGGAGCAGAACCACCACCGTCTGCTTCAACGTACTCATTCGCGCGCTCACCGCCTCCTCT
CTCCACCGCGATGCGCTCGTCCTCTTCGCCTCCATGCGGCCGCGGGGCCCAGCCTGCTTC
CCCGACCATTACACCTACCCGCTCGCGCTCAAGTCGTGCTCGGCGTCCAAGGATCTCCTC
CTCGGCCTCCAGATCCACTCCGCCGTCGCTAAGCTCCGCCTCGACAGGAACGTCTACGTG
GCACACTCCGCGATCAGCATGTACTCGCGGTGCGGCCGCCCGGAGGACGCTTACAGAGTG
TTCGACGGAATGCCGCACCGGGACGTCGTCTCTTGGAATGCTATGATCGCGGGGTTCGCG
CGTGTGGGTCTGTTCGACCGTGCTATTGAGGTTTTCAAGCAGTTTGTGGTGCTGCAGGGT
TCAATGCCAGATGCCGGCACCATGGCAGGTATCTTACCCGCTATGGGGAACGCCAAGCCA
GATGACATTAGGTTTGTGAGGAGAGTGTTTGACAATATGCAGTTTAAGGAACTTATATCT
TGGAATGCTATGCTCGCTGTATATGCTAACAATGAATTTCATGTTAAGGCAGTTGAGCTG
TTCATGCTGATGGAAAAGGATGAGGTTGAGCCAGATTCAATTACTCTAGCAACTGTTCTT
CCTCCATGTGGGGAGCTATCAGCATTTTCAGTGGGAAAACGTATCCACGAGATTATCAAG
CGAAAAAATATGTGCCCTAACTTGTTGCTTGAAAATGCTCTCATGGACATGTATGCAAGC
TGCGGCTGTTTGAAGGATGCTAGGGAAATCTTTGATTTGATGAGTGCCCGGGATGTGATA
TCATGGACTTCAATCATATCTGCTTATGGAAAGCATGGTCATGGAAGAGAGGCTGTTGAT
CTTTTTGAGAAGATGCTAGGACAGGGGCTGGAACCAGACTCTATTGCCTTCGTTGCTGTT
CTAGCAGCATGCAGCCATGCTGGACTTTTGGCTGATGGAAAGCACTACTTTGATTCCATG
ACATCCAGGTATCATATCATTCCAAAAGCAGAGCACTACACTTGCATGGTGGACCTTCTC
GGCCGTGCTGGATGTATAAACGAGGCATATGATTTTATCACGACAATGCTGATTGAGCCA
AATGAAAGAGTCTGGGGAGCCTTATTACAAGCTTGTCGAATTCACTCCAATATGGACATT
GGACTCGTGGCAGCAGACAATCTGTTCAGCTTAGTACCTGAACAAACAGGATACTATGTG
CTGTTATCTAATATGTATGCTAGAGCTGGGAGATGGGCAGATGTTACCTCGGTGAGAAGT
GTCATGGTGAATAAGGGTATCAAGAAATTTCCTGGTACTAGTATTGTTGAGCTAGGGGAT
CAGGTTCACACATTTCATATTGGTGATAGATGTCACCCACAATCTGAAATGATCTACCAT
AAACTGGATGAGCTATTGGGAAAAATAAGGGGGATGGGTTATAACCCAGAGGTAGAGGCT
ACACTTCATGATGTCGAAGAAGAAGACAAGGAAGACCATCTTTCTGTTCACAGTGAGAAA
TTAGCTATTGCATTTCTCCTTTTGAACACTAGTCCAGGTACAATTATCAGGGTGACTATG
AATCTCAGAACCTGTAGCGACTGTCATCTTGCTGCGAAGCTGATTTCAATAATCACCTGT
AGAGAGATTGTCCTCAAAGACACCAATAGGATCCATCATATAGTACAAGGAGTTTGCTCA
TGTGGGGATTATTGGTAG

Peptide Sequence

PEP ID

Zm00001d028388_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:32948302:32950299:-1 gene:Zm00001d028388 transcript:Zm00001d028388_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein

Sequence

MHASRSHLPTSGESLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAY
AACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACF
PDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRV
FDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKP
DDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVL
PPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVI
SWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSM
TSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDI
GLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGD
QVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEK
LAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCS
CGDYW

Transcript Sequence

Transcript ID

Zm00001d028388_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:32948302:32950299:-1 gene:Zm00001d028388 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein

Sequence

ATGCACGCATCGCGGAGCCACCTCCCCACGTCCGGCGAGTCTCTCCTCCGCCTTTTGGCC
GCCTGCCGTGCACCCGCCCACCTCCCATCCCTGCGCGCCGCGCACGCGCGGCTCCTCGTG
CTGCTCCACCCTTCTCACCCATCCGCGGCACACGCTAACGTCAAACTCATCCAAGCCTAC
GCTGCCTGCTCCGCGCTCCCCTTGGCGCACACCGTGCTCGAGTCCTCCTCCCCCGACGGC
AGGAGCAGAACCACCACCGTCTGCTTCAACGTACTCATTCGCGCGCTCACCGCCTCCTCT
CTCCACCGCGATGCGCTCGTCCTCTTCGCCTCCATGCGGCCGCGGGGCCCAGCCTGCTTC
CCCGACCATTACACCTACCCGCTCGCGCTCAAGTCGTGCTCGGCGTCCAAGGATCTCCTC
CTCGGCCTCCAGATCCACTCCGCCGTCGCTAAGCTCCGCCTCGACAGGAACGTCTACGTG
GCACACTCCGCGATCAGCATGTACTCGCGGTGCGGCCGCCCGGAGGACGCTTACAGAGTG
TTCGACGGAATGCCGCACCGGGACGTCGTCTCTTGGAATGCTATGATCGCGGGGTTCGCG
CGTGTGGGTCTGTTCGACCGTGCTATTGAGGTTTTCAAGCAGTTTGTGGTGCTGCAGGGT
TCAATGCCAGATGCCGGCACCATGGCAGGTATCTTACCCGCTATGGGGAACGCCAAGCCA
GATGACATTAGGTTTGTGAGGAGAGTGTTTGACAATATGCAGTTTAAGGAACTTATATCT
TGGAATGCTATGCTCGCTGTATATGCTAACAATGAATTTCATGTTAAGGCAGTTGAGCTG
TTCATGCTGATGGAAAAGGATGAGGTTGAGCCAGATTCAATTACTCTAGCAACTGTTCTT
CCTCCATGTGGGGAGCTATCAGCATTTTCAGTGGGAAAACGTATCCACGAGATTATCAAG
CGAAAAAATATGTGCCCTAACTTGTTGCTTGAAAATGCTCTCATGGACATGTATGCAAGC
TGCGGCTGTTTGAAGGATGCTAGGGAAATCTTTGATTTGATGAGTGCCCGGGATGTGATA
TCATGGACTTCAATCATATCTGCTTATGGAAAGCATGGTCATGGAAGAGAGGCTGTTGAT
CTTTTTGAGAAGATGCTAGGACAGGGGCTGGAACCAGACTCTATTGCCTTCGTTGCTGTT
CTAGCAGCATGCAGCCATGCTGGACTTTTGGCTGATGGAAAGCACTACTTTGATTCCATG
ACATCCAGGTATCATATCATTCCAAAAGCAGAGCACTACACTTGCATGGTGGACCTTCTC
GGCCGTGCTGGATGTATAAACGAGGCATATGATTTTATCACGACAATGCTGATTGAGCCA
AATGAAAGAGTCTGGGGAGCCTTATTACAAGCTTGTCGAATTCACTCCAATATGGACATT
GGACTCGTGGCAGCAGACAATCTGTTCAGCTTAGTACCTGAACAAACAGGATACTATGTG
CTGTTATCTAATATGTATGCTAGAGCTGGGAGATGGGCAGATGTTACCTCGGTGAGAAGT
GTCATGGTGAATAAGGGTATCAAGAAATTTCCTGGTACTAGTATTGTTGAGCTAGGGGAT
CAGGTTCACACATTTCATATTGGTGATAGATGTCACCCACAATCTGAAATGATCTACCAT
AAACTGGATGAGCTATTGGGAAAAATAAGGGGGATGGGTTATAACCCAGAGGTAGAGGCT
ACACTTCATGATGTCGAAGAAGAAGACAAGGAAGACCATCTTTCTGTTCACAGTGAGAAA
TTAGCTATTGCATTTCTCCTTTTGAACACTAGTCCAGGTACAATTATCAGGGTGACTATG
AATCTCAGAACCTGTAGCGACTGTCATCTTGCTGCGAAGCTGATTTCAATAATCACCTGT
AGAGAGATTGTCCTCAAAGACACCAATAGGATCCATCATATAGTACAAGGAGTTTGCTCA
TGTGGGGATTATTGGTAG