Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028370_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:32363713:32367026:1 gene:Zm00001d028370 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein OBERON 3
Sequence

ATGTTCGGCGACTCCGACGGATCCAAGGACGCCAGCGCCGCCGCGCCCGGGTCCAACTCC
AACCCGCCGGAGCCGCCTTTCCCAAACCGGGAGCTCACGCTCAGCAGCTACCTCTGCGAC
AAGGCGCCGCCAGCCGCGGCGGCGGGGCCATCCTCGCCGCCCAACCCCGAGGCGGCTGCC
CCGGCAGACGATGCCGCGGCCAGCGCCAAGCTGTGCGTCGAGCGGGATTTCCTCCACCTC
TCCGCGCCCAAGCGCGGGGATCCGCCAGGCGACGACTCCTCCGTGGTCGGGGGTAAGAAG
CCCCGCCTAGACTCGCTCCAGCTCTCGCTCTCCCTCTCCACCGACGCGCCCGCGCCGCCG
CCGGCCTCGCAGCAGCCGTCCTCCTCCCTGCCTCCGCCGCAGCTCGCGTCACTCCTCCCG
GTCGATGGCGATCTGCGGGGCGCGACCGCGGCCGCAGCCGCCGCGGTGCCTGCCACGCCT
GTCGCGCCGCCCCCCAGGCGGACCTACAGCGCCAACACGGGGCGCACCCGGAGCATCAAC
TCCGACGACATGTCCTACTCCTACTCGGTGTTCTCGCACAACCCGAGCTGCTCCCTCACG
CACAACTCCACCGACATCTACGCCGCCGGGGAGGGCACCAACGGCTCCGTCCACAGCCGG
TTCAACTTCCGCCCCATGGGGGACGGCAGCGTCGCCTTCGCCCCGGCGCAGCTCAAGGAG
GGCACCTCGTCCTTCTTCCCCACGGAGCTCCCCGCGAGGATGGCAGCCGCGCTCAGCGCT
GGCGCCAGCTTTGACGCCAGCCATGGGGGGATGCACTCGTCACGGCCTCATAGGATCCTG
CGGGAGATCGTGTCGGACCCTGTGCCAGCCATGGCTCAGGCCCTGCAGGATTTTCCGAGT
GAAACCCTGGAGGTGCTGCGGGAGACAGTGCGGGGTATGGTTGATGCTCCGGAGAAGAGG
GATGAGCTGTCGAGCCTGCAGCGGAAGCTGGAGCGTCGCTCGGACCTGACTGCCGAGGTG
TTGGGGCGGGCAAACAAGACGCAGCTGGAGATCCTGGTGGCCATCAAAACCGGCATGGCC
ACTTTTGTCACTGGTAAGGGCCGAGTCTCCAGCAGCGAGCTTGTGGAGATGTTTCTGATG
ACACGGTGCCGCAACCTGAACTGCAAGAGTGCCGTCCCTGTGGACGACTGCGAGTGCAAG
ATTTGCTCCACCAAGAAGGGCTTCTGCAGTGCGTGTATGTGCCCGGTGTGCCAGAAGTTT
GATTGTGCTGCGAATACATGCAGCTGGGTTGGATGTGATGTCTGCTCCCATTGGTGCCAT
GCTGCGTGCGCGCTAGAGAAGAACTTGATAAGGCCAGGTCCGACATTGAAGGGGGCGATG
GGCACGACCGAGATGCAGTTCCAGTGCCTCGGCTGCAACCATGCTTCTGAGATGTTTGGG
TTTGTTAAGGAGGTGTTCAATTGCTGTGCTCAGAACTGGAGTGCTGAGACGCAGATTAAA
GAGCTAGACTTTGTTAGGAAGATATTTGCTGCTAGTGAGGATTTCGAGGGGAAGGGGCTC
CATGCCAAGGCAGAAGAGGTCCTCAGCATGCTTGTAAAGAAACTCATTTCTCCTCCTGAT
GCGACGAACACCATGCTACAATTCTTTAAATATGGTGTAACAGACTGTTCTGTTACTGGT
AGCAAGTCAAAAGGAATACTGGCGGCTCAGACGAGTAAATCTACAGATATGCTTCATCTT
CAGACCCCAACCATCACTCCGCCAAAATCCCCGTTTAACTTCAAGCCGAGCACCTCCATT
CTTGATTCACAGATCGATGTGCTCAAGGCCAGCCCAAAACCACTCCCTATAGAACCCCAT
TTCAGCTCCAGCTCAAAGGACGATGACTCCTCCAGCCTTGAGACCATCGTGAAGTGCAAG
GAAGCTGAGGCGAAACTGTTCCAGAAACTGGCCGATGATGCCAGGAAGGAGGTAGACAGC
TACCGTCAGATCGTCCGCACCAAGACCCAGAAACTAGAGGAGGAGTACGCCACGAAGGTG
GCAAAGCTGTGCTTCCAGGAGACGGAGGAGAAGAGGAGGAAGAAAGTTGAAGAGCTGAAG
ACGCTCGAGAACTCGCACTACGACTACCACAAGATGAAGCTGCGGATGCAGACCGAAATC
CAGGGCTTGCTCGAGCGGATGGAAGCCACAAAGAAGATGTGGGTATAG

Peptide Sequence

PEP ID

Zm00001d028370_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:32363713:32367026:1 gene:Zm00001d028370 transcript:Zm00001d028370_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein OBERON 3
Sequence

MFGDSDGSKDASAAAPGSNSNPPEPPFPNRELTLSSYLCDKAPPAAAAGPSSPPNPEAAA
PADDAAASAKLCVERDFLHLSAPKRGDPPGDDSSVVGGKKPRLDSLQLSLSLSTDAPAPP
PASQQPSSSLPPPQLASLLPVDGDLRGATAAAAAAVPATPVAPPPRRTYSANTGRTRSIN
SDDMSYSYSVFSHNPSCSLTHNSTDIYAAGEGTNGSVHSRFNFRPMGDGSVAFAPAQLKE
GTSSFFPTELPARMAAALSAGASFDASHGGMHSSRPHRILREIVSDPVPAMAQALQDFPS
ETLEVLRETVRGMVDAPEKRDELSSLQRKLERRSDLTAEVLGRANKTQLEILVAIKTGMA
TFVTGKGRVSSSELVEMFLMTRCRNLNCKSAVPVDDCECKICSTKKGFCSACMCPVCQKF
DCAANTCSWVGCDVCSHWCHAACALEKNLIRPGPTLKGAMGTTEMQFQCLGCNHASEMFG
FVKEVFNCCAQNWSAETQIKELDFVRKIFAASEDFEGKGLHAKAEEVLSMLVKKLISPPD
ATNTMLQFFKYGVTDCSVTGSKSKGILAAQTSKSTDMLHLQTPTITPPKSPFNFKPSTSI
LDSQIDVLKASPKPLPIEPHFSSSSKDDDSSSLETIVKCKEAEAKLFQKLADDARKEVDS
YRQIVRTKTQKLEEEYATKVAKLCFQETEEKRRKKVEELKTLENSHYDYHKMKLRMQTEI
QGLLERMEATKKMWV

Transcript Sequence

Transcript ID

Zm00001d028370_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:32363713:32367026:1 gene:Zm00001d028370 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein OBERON 3
Sequence

GTGGGTGCTTTGGCGTGCAGAAGTCAACCGAGCGCAGCGCCCGCCCCCTCCCTTCCCCGC
CCGCCGGCCAACAACAACAAAAAAAAGCACCGAAATCCGCCCCGCGCTCACCCGGAGGCC
GGATCCAGCGACGATGTTCGGCGACTCCGACGGATCCAAGGACGCCAGCGCCGCCGCGCC
CGGGTCCAACTCCAACCCGCCGGAGCCGCCTTTCCCAAACCGGGAGCTCACGCTCAGCAG
CTACCTCTGCGACAAGGCGCCGCCAGCCGCGGCGGCGGGGCCATCCTCGCCGCCCAACCC
CGAGGCGGCTGCCCCGGCAGACGATGCCGCGGCCAGCGCCAAGCTGTGCGTCGAGCGGGA
TTTCCTCCACCTCTCCGCGCCCAAGCGCGGGGATCCGCCAGGCGACGACTCCTCCGTGGT
CGGGGGTAAGAAGCCCCGCCTAGACTCGCTCCAGCTCTCGCTCTCCCTCTCCACCGACGC
GCCCGCGCCGCCGCCGGCCTCGCAGCAGCCGTCCTCCTCCCTGCCTCCGCCGCAGCTCGC
GTCACTCCTCCCGGTCGATGGCGATCTGCGGGGCGCGACCGCGGCCGCAGCCGCCGCGGT
GCCTGCCACGCCTGTCGCGCCGCCCCCCAGGCGGACCTACAGCGCCAACACGGGGCGCAC
CCGGAGCATCAACTCCGACGACATGTCCTACTCCTACTCGGTGTTCTCGCACAACCCGAG
CTGCTCCCTCACGCACAACTCCACCGACATCTACGCCGCCGGGGAGGGCACCAACGGCTC
CGTCCACAGCCGGTTCAACTTCCGCCCCATGGGGGACGGCAGCGTCGCCTTCGCCCCGGC
GCAGCTCAAGGAGGGCACCTCGTCCTTCTTCCCCACGGAGCTCCCCGCGAGGATGGCAGC
CGCGCTCAGCGCTGGCGCCAGCTTTGACGCCAGCCATGGGGGGATGCACTCGTCACGGCC
TCATAGGATCCTGCGGGAGATCGTGTCGGACCCTGTGCCAGCCATGGCTCAGGCCCTGCA
GGATTTTCCGAGTGAAACCCTGGAGGTGCTGCGGGAGACAGTGCGGGGTATGGTTGATGC
TCCGGAGAAGAGGGATGAGCTGTCGAGCCTGCAGCGGAAGCTGGAGCGTCGCTCGGACCT
GACTGCCGAGGTGTTGGGGCGGGCAAACAAGACGCAGCTGGAGATCCTGGTGGCCATCAA
AACCGGCATGGCCACTTTTGTCACTGGTAAGGGCCGAGTCTCCAGCAGCGAGCTTGTGGA
GATGTTTCTGATGACACGGTGCCGCAACCTGAACTGCAAGAGTGCCGTCCCTGTGGACGA
CTGCGAGTGCAAGATTTGCTCCACCAAGAAGGGCTTCTGCAGTGCGTGTATGTGCCCGGT
GTGCCAGAAGTTTGATTGTGCTGCGAATACATGCAGCTGGGTTGGATGTGATGTCTGCTC
CCATTGGTGCCATGCTGCGTGCGCGCTAGAGAAGAACTTGATAAGGCCAGGTCCGACATT
GAAGGGGGCGATGGGCACGACCGAGATGCAGTTCCAGTGCCTCGGCTGCAACCATGCTTC
TGAGATGTTTGGGTTTGTTAAGGAGGTGTTCAATTGCTGTGCTCAGAACTGGAGTGCTGA
GACGCAGATTAAAGAGCTAGACTTTGTTAGGAAGATATTTGCTGCTAGTGAGGATTTCGA
GGGGAAGGGGCTCCATGCCAAGGCAGAAGAGGTCCTCAGCATGCTTGTAAAGAAACTCAT
TTCTCCTCCTGATGCGACGAACACCATGCTACAATTCTTTAAATATGGTGTAACAGACTG
TTCTGTTACTGGTAGCAAGTCAAAAGGAATACTGGCGGCTCAGACGAGTAAATCTACAGA
TATGCTTCATCTTCAGACCCCAACCATCACTCCGCCAAAATCCCCGTTTAACTTCAAGCC
GAGCACCTCCATTCTTGATTCACAGATCGATGTGCTCAAGGCCAGCCCAAAACCACTCCC
TATAGAACCCCATTTCAGCTCCAGCTCAAAGGACGATGACTCCTCCAGCCTTGAGACCAT
CGTGAAGTGCAAGGAAGCTGAGGCGAAACTGTTCCAGAAACTGGCCGATGATGCCAGGAA
GGAGGTAGACAGCTACCGTCAGATCGTCCGCACCAAGACCCAGAAACTAGAGGAGGAGTA
CGCCACGAAGGTGGCAAAGCTGTGCTTCCAGGAGACGGAGGAGAAGAGGAGGAAGAAAGT
TGAAGAGCTGAAGACGCTCGAGAACTCGCACTACGACTACCACAAGATGAAGCTGCGGAT
GCAGACCGAAATCCAGGGCTTGCTCGAGCGGATGGAAGCCACAAAGAAGATGTGGGTATA
GGCTCCTGTTAACAATTTCATGTTGCTGCTGCTTAATGTTTCGGGTATAGACTCCAGCTA
ACAACTGCCTGATGCTGCTGCTGCTGCTGAATACCTGAGATTTGGTGTTGTTCGTTAGGA
GAGTGTCCATTGTTGTATTTTTTTTCACCATCTTGTGTTATAATCTAAATGCTGTTGTAA
CTTGCAAGTGGATGCCTAGCCTTGCGCTTGCTGATATAACTTGGCAGCATTCACTCAGTT
AATCACTTCAGGGTTGTTCCGAGTTCGAAGTACCATTTGGCCAAAGAAAAA