Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028368_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:32324768:32327736:1 gene:Zm00001d028368 gene_biotype:protein_coding transcript_biotype:protein_coding description:Purple acid phosphatase 1

Sequence

ATGGCGCAGGGCAGCCGCAGCGCTGCCGTGCCCGCCGCAGCGTCCTTCTTCGCCCTTCTC
GCCGTGGCGGCCCCGCTGCTCCTGTGCTGCGCGCCGGCCGCCGCGGAGCTGGCCAGGCTG
GAGCACCCGCCCAAGGACGGCGGCTCGCTCAGCCTGCTCGTCGTCGGCGACTGGGGCCGA
AAGGGCACGTTCAACCAGTCCAGGGTCGCCCATCAGATGGGCAGGGTTGGGGAGCAGCTC
AGCATCGACTTCGTCATATCCACCGGCGACAACTTCTACGAGAACGGCCTGACGGGCACG
GATGACGAGGCGTTCGAGCAGTCTTTCACCGATATCTACACGGCGAAGAGCCTGCAGAAG
CCGTGGTACCTGGTGCTGGGAAACCATGACTACAGGGGTGACGCGCTCGCGCAGCTGAGC
CCGGTCCTGCGGAAGATCGACAGCCGGTTCATTTGCATCAAATCATTCGTCGTCAACGCA
GAAATCGTGGAGTTCTTCTTCGTTGACACCACCCCGTTTCAACTCAAGTACTGGACTCAC
CCTAAGGACGATCACTACGACTGGAGAGGGGTGGCGCCTCGGGAAAACTACATAAACAAT
CTGCTCAAGGATTTGGACGGGGCCATGAAGACATCGACTGCGGCGTGGAAGGTTGCCGTG
GGCCACCATACCATGAGGAGTGTCAGTGATCATGGTGACACCAAGGAGCTACTGCAGCTA
CTGCTTCCAGTCCTCCAGGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGC
CTGGAACACATCAGCAGCAGAGACAGCCCAATCCAGTACTTCACAAGCGGAGGCGGTTCC
AAGGCATGGAGAGGAGTGCAGAACCCCACCGAAGATGACCTCAAGTTCTTCTACGACGGG
CAAGGCTTCATGTCCCTCCAGCTAGACCGTAGCCAAGCCAAGTTCACCTTTTACGATGTC
GACGGGAAGGCGCTGTACAGTTACACACGGTCGAGCCTGATGGAAACAGGCCACCACCTC
CAAGCCTCCGGCTACGTCAACGAGGAATGA

Peptide Sequence

PEP ID

Zm00001d028368_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:32324768:32327736:1 gene:Zm00001d028368 transcript:Zm00001d028368_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Purple acid phosphatase 1

Sequence

MAQGSRSAAVPAAASFFALLAVAAPLLLCCAPAAAELARLEHPPKDGGSLSLLVVGDWGR
KGTFNQSRVAHQMGRVGEQLSIDFVISTGDNFYENGLTGTDDEAFEQSFTDIYTAKSLQK
PWYLVLGNHDYRGDALAQLSPVLRKIDSRFICIKSFVVNAEIVEFFFVDTTPFQLKYWTH
PKDDHYDWRGVAPRENYINNLLKDLDGAMKTSTAAWKVAVGHHTMRSVSDHGDTKELLQL
LLPVLQANGVDFYINGHDHCLEHISSRDSPIQYFTSGGGSKAWRGVQNPTEDDLKFFYDG
QGFMSLQLDRSQAKFTFYDVDGKALYSYTRSSLMETGHHLQASGYVNEE

Transcript Sequence

Transcript ID

Zm00001d028368_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:32324768:32327736:1 gene:Zm00001d028368 gene_biotype:protein_coding transcript_biotype:protein_coding description:Purple acid phosphatase 1

Sequence

ATTAACATCTCTAATAACCCGCCTGCCCTGACAGCAGGAGCCGCCTCCAGTATCCCCCGT
CAATGCTTGCAAGACAGAAGACACCTGACCTGATCTGACCAGGCAGATCGAGTGGCTTGC
CGTCGCGTGCAACCGCAACCGCCGCTGGTATTATATAGAGACCCCTATTACATATATCGG
CCGCTGTGGCGCTTGTCGTCGATCGTTCCATCGACCGGCGGCCGGCCAGCCTAGCTCTTG
GCTCTTGCTCCGATCGGATCGAGCGCCGGACAAGTCAAGGCAGCCGTACGTACGACGATG
GCGCAGGGCAGCCGCAGCGCTGCCGTGCCCGCCGCAGCGTCCTTCTTCGCCCTTCTCGCC
GTGGCGGCCCCGCTGCTCCTGTGCTGCGCGCCGGCCGCCGCGGAGCTGGCCAGGCTGGAG
CACCCGCCCAAGGACGGCGGCTCGCTCAGCCTGCTCGTCGTCGGCGACTGGGGCCGAAAG
GGCACGTTCAACCAGTCCAGGGTCGCCCATCAGATGGGCAGGGTTGGGGAGCAGCTCAGC
ATCGACTTCGTCATATCCACCGGCGACAACTTCTACGAGAACGGCCTGACGGGCACGGAT
GACGAGGCGTTCGAGCAGTCTTTCACCGATATCTACACGGCGAAGAGCCTGCAGAAGCCG
TGGTACCTGGTGCTGGGAAACCATGACTACAGGGGTGACGCGCTCGCGCAGCTGAGCCCG
GTCCTGCGGAAGATCGACAGCCGGTTCATTTGCATCAAATCATTCGTCGTCAACGCAGAA
ATCGTGGAGTTCTTCTTCGTTGACACCACCCCGTTTCAACTCAAGTACTGGACTCACCCT
AAGGACGATCACTACGACTGGAGAGGGGTGGCGCCTCGGGAAAACTACATAAACAATCTG
CTCAAGGATTTGGACGGGGCCATGAAGACATCGACTGCGGCGTGGAAGGTTGCCGTGGGC
CACCATACCATGAGGAGTGTCAGTGATCATGGTGACACCAAGGAGCTACTGCAGCTACTG
CTTCCAGTCCTCCAGGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTG
GAACACATCAGCAGCAGAGACAGCCCAATCCAGTACTTCACAAGCGGAGGCGGTTCCAAG
GCATGGAGAGGAGTGCAGAACCCCACCGAAGATGACCTCAAGTTCTTCTACGACGGGCAA
GGCTTCATGTCCCTCCAGCTAGACCGTAGCCAAGCCAAGTTCACCTTTTACGATGTCGAC
GGGAAGGCGCTGTACAGTTACACACGGTCGAGCCTGATGGAAACAGGCCACCACCTCCAA
GCCTCCGGCTACGTCAACGAGGAATGAAGCAGGGGCGAGTCAGCATGCAGCGCTGGAGAA
CTGAGATCGATGCAGTTCAAGCGTACGTATAAATTCTCGAGTGCTTGATGTGGTTCATCT
GTCAAGGGCAACAACAGTTAGGTTTATATGTGTGCCCTTGCATCTCTCGACATCTGTCAC
TGCCGTCCGGTACTATTTGGGGTCATGCCATCGATTCGAAAACATGACATGGTAGGGGCA
GCCATGATGTAGCAAAAAAAAAAATAGTGCAAATATTCATTATCGAGGAGTTAAAACATT
AATTGTGTGGACAGCGGCCGAGCATAGGACCAAAATCAGCAGGGGGCAATCAACAGATTA
TGTAAAAATTACATGGTTCAGTGGTGCGACAATAAAGACACAGTATATATATGGAAATAT
ATCGTATGCAATCAAGCGATGTGCTACACCCTATCAAA