Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028272_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:28789870:28800586:1 gene:Zm00001d028272 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TATC description:Sec-independent protein translocase protein TATC%2C chloroplastic

Sequence

ATGGGAAGCGCTGGGGCGCTGCTCTGGCACACGCCGCAGCAGCTGCACGGCCGTGGCATC
CTCTTCCGCCAGAGCCGGCCTCTCCTGCGCCAGCGCAACCTGCCTCTAATATCGCTAGCT
GCCCCGGCGCTCGAGCCCGAGCGCCGCCGCCGGCAGTGCCTCCGCTGCGCTGCCGTCGAC
GGGGACGGCGCCCTCCGGGAGTCTGGGCCACTGCCACAGAAGGAGTCTCCGTCCAGCGGC
ATCGGTGCCGCACTCGAGGACCCGCCTCCAGGACCTCCTGTGGAGAATGGTTCCTTTGGA
GGCCCCTCACAGGAAGAACAGAGTGCTCTATATACTTTTCTTTATCCAAGCAAAGACTTA
CTTCCAGATGATAAGGAGATGAGTATATTTGATCATCTAGAGGAGCTTCGTGACAGGATT
TTCATCTCAGTTTTGGCTGTTGGGGCTGCGATATTAGGCTGTTTTGCTTTTTCAAAAGAT
TTGGTTATTTTTCTTGAGGCACCAGTGACTGCTCAGGGTGTTCGGTTTTTGCAGCTCTCG
CCTGGGGAATTTTTCTTTACAACATTAAAGGTTTCAGGTTATTGTGGCCTTTTACTTGGA
AGTCCTATCATTTTGTATGAGATCATTGCATTTGTTATCCCAGGTTTAACAAGGGACGAG
CGGAAATTTCTTGGGCCTATTGTGTTGGGTTCTTCTGTTCTATTCTATCTAGGCATTTTC
TTCTCCTACACGGTTCTCAGCCCTGCTGCGTTGAACTTCTTTGTGAATTATGCAGATGGG
GCAGTGGAATCGTTGTGGTCAATAGACCAGTACTTTGAATTCATACTTGTGCTGATGTTT
AGCACAGGGTTGTCCTTTCAGGTCCCTGTTATCCAGCTTTTGCTGGGACAACTTGGATTG
GTTTCTAGTGACCAAATGCTTTCGATCTGGAGATATGTTGTTGTTGGTGCTGTTGTTGCT
GCTGCTGTGCTTACACCTTCGACGGACCCGTTGACACAAATGCTCCTGGCTGGTCCCTTG
CTTGGTTTATACTTGGGTGGTGCATGGATGGTCAAGATAACTGGGCGCTAA

Peptide Sequence

PEP ID

Zm00001d028272_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:28789870:28800586:1 gene:Zm00001d028272 transcript:Zm00001d028272_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TATC description:Sec-independent protein translocase protein TATC%2C chloroplastic

Sequence

MGSAGALLWHTPQQLHGRGILFRQSRPLLRQRNLPLISLAAPALEPERRRRQCLRCAAVD
GDGALRESGPLPQKESPSSGIGAALEDPPPGPPVENGSFGGPSQEEQSALYTFLYPSKDL
LPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIFLEAPVTAQGVRFLQLS
PGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLGPIVLGSSVLFYLGIF
FSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLSFQVPVIQLLLGQLGL
VSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKITGR

Transcript Sequence

Transcript ID

Zm00001d028272_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:28789870:28800586:1 gene:Zm00001d028272 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TATC description:Sec-independent protein translocase protein TATC%2C chloroplastic

Sequence

GACCGAGCCAGATAATATCGTAACATCGTCTGTCCGCCACCGGTTACCTCTTTCTCCAGG
TAGCGCACCATCGGAACGGCGAGGAGCAGACGGGAACGGGGATGGGAAGCGCTGGGGCGC
TGCTCTGGCACACGCCGCAGCAGCTGCACGGCCGTGGCATCCTCTTCCGCCAGAGCCGGC
CTCTCCTGCGCCAGCGCAACCTGCCTCTAATATCGCTAGCTGCCCCGGCGCTCGAGCCCG
AGCGCCGCCGCCGGCAGTGCCTCCGCTGCGCTGCCGTCGACGGGGACGGCGCCCTCCGGG
AGTCTGGGCCACTGCCACAGAAGGAGTCTCCGTCCAGCGGCATCGGTGCCGCACTCGAGG
ACCCGCCTCCAGGACCTCCTGTGGAGAATGGTTCCTTTGGAGGCCCCTCACAGGAAGAAC
AGAGTGCTCTATATACTTTTCTTTATCCAAGCAAAGACTTACTTCCAGATGATAAGGAGA
TGAGTATATTTGATCATCTAGAGGAGCTTCGTGACAGGATTTTCATCTCAGTTTTGGCTG
TTGGGGCTGCGATATTAGGCTGTTTTGCTTTTTCAAAAGATTTGGTTATTTTTCTTGAGG
CACCAGTGACTGCTCAGGGTGTTCGGTTTTTGCAGCTCTCGCCTGGGGAATTTTTCTTTA
CAACATTAAAGGTTTCAGGTTATTGTGGCCTTTTACTTGGAAGTCCTATCATTTTGTATG
AGATCATTGCATTTGTTATCCCAGGTTTAACAAGGGACGAGCGGAAATTTCTTGGGCCTA
TTGTGTTGGGTTCTTCTGTTCTATTCTATCTAGGCATTTTCTTCTCCTACACGGTTCTCA
GCCCTGCTGCGTTGAACTTCTTTGTGAATTATGCAGATGGGGCAGTGGAATCGTTGTGGT
CAATAGACCAGTACTTTGAATTCATACTTGTGCTGATGTTTAGCACAGGGTTGTCCTTTC
AGGTCCCTGTTATCCAGCTTTTGCTGGGACAACTTGGATTGGTTTCTAGTGACCAAATGC
TTTCGATCTGGAGATATGTTGTTGTTGGTGCTGTTGTTGCTGCTGCTGTGCTTACACCTT
CGACGGACCCGTTGACACAAATGCTCCTGGCTGGTCCCTTGCTTGGTTTATACTTGGGTG
GTGCATGGATGGTCAAGATAACTGGGCGCTAACTGCTTTGTGCAAGCAGAAAGTTGAGCA
GACGGTTAAATAGTTTCATCTAATCGATGTTGAACGTTGAAGTGGTGCTCAATCGCAAAA
GGCAGAAGGCTTCCATCCACTACAACATCGCTCGCTGTGTTTGCCGCTGGACTTTCTTGG
TTGCCGGCTTGGCACAGCTGCGTCGGAGGGCAGGTATGCCATCATACATACATATGGTTA
TATATCATATATGGTTTTCTTGTACAACACAAACCAACATAAGTTGTAGTGGTTAGCAGT
GAGTACTCTCTTCCTAGATACCATAGTTCGAATTCTAGCAATTGCACCTCATTTCTTATA
GTTCGCTGACGAGTGGGGAGCAGGACGACATCGAAGAAACTCCCACTTTAAGGGTGACTA
ATATGAATGTATGAGTTGAAAAGGAGCTTAATTTAATTTTATAGCCCGC