Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028238_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:1:27582106:27595493:-1 gene:Zm00001d028238 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCAAT-binding factor
Sequence	ATGTCCATTTTCTCCGTAGTTTACGTAATTTATGTAATGATGAATGTGATTTTGATCATG CCTATTTTATATTTTTGTTTACTGCAGACAGTTTTCATGCTTTTGAAAAGTAAGTCAGAA CAGGAACGTCGTTTGCTCACAGCTCTTGTTAACAAACTTGGTGATCCTGAAAGGAGAGCA GCATCAAGTGCTGCATATCTGTTAACATGTCTCTTGGCTGCTCACCCTAATATGAAGATG GTGGTGATAGATGAGGTGGATTCTTTTCTCTTCAGACCACATGTTGGACTTAGGGCCAAG TACCAGGCTGTCAATTTCTTGAGCCAGATTCTTCTTACAAACAAGGGAGATGGGCCTAAA ATTGCAAAACGGTTGGTGGATGTCTACATTGCACTTTTCAAGGTACTAATGAGCTCTGGT GATACCAAAGGAGATACATATAGCAAGGACAGCAAGAAAAAGGTAGGAAAAATAGAGGGA GGAAATAACAAGATGGACTCCAGATCCAAGGGAAACAATGAAGTGGGTTCAACAGCAGGA TCAGATTTGGAGCTGGACTCCAGAATCCTTTCTGCGCTTTTAACTGGTGTAAATAGGGCA TTACCATATGTTGCAAGCTCAGAAGTTGACGATATTGTGGAAGTGCAGACACCTATTCTT TTCAGATTGGTTCACGCTGAAAATTTCAATGTTGGTGTTCAGGCATTGATGCTTTTGTTC CAAATATCTATAAAGAATAATATAGCAAGTGATCGTTTGTACCGTGCATTATACTCAAAA CTCTTGAGTCCTTCTGCTGTTACTTCCTCAAAGCCAGAGTTATTTCTTGGGCTGTTGGTG AAAGCGATGAAGAATGATGTAATGTTGAAGAGAGTTGCTGCTTTCTCAAAGCGGCTGCTG CAGGTGGCTCTTCAACGGCCTCCTCAATATGCTTGCGGATGCCTTTTCATTCTGTCAGAA GTCCTTAAGGCAAAGCCACCATTATGGGGGATTGTGCTCCAGAATGAATCTGTTGATGAT GGTGATGAACACTTTGAAGACATTTTAGAGATTCCCGAGGACTCTTCTGTTGCCTCAGCA GTGCTACATAAACATAATGAAAAAGTAGCTGCACATGAGAAACACAACCTTGATGCTGCT GATGGAATTGATAGTGTAAAACAAGTAAATTTGGTAGATGAGAACAATGCATCAACTGAC TCGTCCAGACAACATGCATTCTATGATCCACGACACAGAGAGCCTTCTTACTGCAATGCA GATCGTGTCAGTTGGTGGGAGTTAACAGTATTGGCTTCACATGTGCACCCTTCAGTTTCT ACTATGGCTAGAACATTGCTATCTGGCAACAATATTGTTTACAGTGGTGATCCGCTGACA GACCTATCACTTCCTGCTTTCCTTGACAAATTCATGGAAAAGAAACCAAAAGGGAACCGC ATAGCTGAAGGAAGATGGCATGGTGGATCACAAATTGCTCCGGCTAAAAAGCTTAATCTG AATCATCATCTCATCGGAGAGGAGCTTCTAGAATTGGCAGAAAATGAAGTGCCTCCTGAA GATATTGTTTTCCACCGTTTCTATTTGAACAAGACCGGCACTGTTAAGCGTAAGACAAAG CAGAAGGACTCAGTTCTTGATGAAGATGCGGGGGAACTCTTAGCTGATAATGACGCTGAT GAGGCTAGTGACGAGAGTGGAGATGAGATACTGGATCTGGGAGATGGGTTGGCAGATGAT GGAGAATATGACTATGACGACCTTGACTCAAATGCATTTGAAGAGGAAAAAGATTTACTT AGAGATGACAGTGATGTGGAATTTGATGACGTTTCAGATGATACTGCATCTGGGGATGAA GGGTCAGAAAATGACGATGACATTCCTATTCTCGCGGGCGATTCAGATGGCAACTTAAGT GATGACGAGATGGTTGATGCTGGTAAGGGCGGTGTCTCTTACACAAAGAAAAGGAGGGCA GGGAAGAAGAGTGGGTTGTCTCCATTTGCAAGCCTGGATGATTATGAGCACCTAATGGTT GGGGATGCTGATGCAACAACAGCAAAGCGGAAGCACATGGCAACAGGGAGAGCTGGTGGT GAGAAGAAACCAAAGTTGAGACCACGAAAGAAAAGGTCGCGGAGTTCAGAATGA

Peptide Sequence

PEP ID	Zm00001d028238_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:1:27582106:27595493:-1 gene:Zm00001d028238 transcript:Zm00001d028238_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCAAT-binding factor
Sequence	MSIFSVVYVIYVMMNVILIMPILYFCLLQTVFMLLKSKSEQERRLLTALVNKLGDPERRA ASSAAYLLTCLLAAHPNMKMVVIDEVDSFLFRPHVGLRAKYQAVNFLSQILLTNKGDGPK IAKRLVDVYIALFKVLMSSGDTKGDTYSKDSKKKVGKIEGGNNKMDSRSKGNNEVGSTAG SDLELDSRILSALLTGVNRALPYVASSEVDDIVEVQTPILFRLVHAENFNVGVQALMLLF QISIKNNIASDRLYRALYSKLLSPSAVTSSKPELFLGLLVKAMKNDVMLKRVAAFSKRLL QVALQRPPQYACGCLFILSEVLKAKPPLWGIVLQNESVDDGDEHFEDILEIPEDSSVASA VLHKHNEKVAAHEKHNLDAADGIDSVKQVNLVDENNASTDSSRQHAFYDPRHREPSYCNA DRVSWWELTVLASHVHPSVSTMARTLLSGNNIVYSGDPLTDLSLPAFLDKFMEKKPKGNR IAEGRWHGGSQIAPAKKLNLNHHLIGEELLELAENEVPPEDIVFHRFYLNKTGTVKRKTK QKDSVLDEDAGELLADNDADEASDESGDEILDLGDGLADDGEYDYDDLDSNAFEEEKDLL RDDSDVEFDDVSDDTASGDEGSENDDDIPILAGDSDGNLSDDEMVDAGKGGVSYTKKRRA GKKSGLSPFASLDDYEHLMVGDADATTAKRKHMATGRAGGEKKPKLRPRKKRSRSSE

Transcript Sequence

Transcript ID	Zm00001d028238_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:27582106:27595493:-1 gene:Zm00001d028238 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCAAT-binding factor
Sequence	TGAACTGGGATGACTAGATTAGACGTGTCGTTGTAGATGGGCTTTTGGAGCTAGGCTGCT GCATCTGTGGGCTTCTAGGGTTGGCCAACAGGCACAAGACAAAAGCTTGGAGCATTGGAC GCCGAGCACCCACTCGTGCTCCTGCAGTCCTTTGCCAAGAGCGTAGCCGCTACCGGTACT CAAGGCCGTACAACCGCCAACATCGCACAAGGCCGCGGCCACCGCAGCAGCACAAGGACG CCGCCGCCCGCCTCCGCCGAAGACGGAGTGCCACCCCTAGCCCGAAGACAGAGCCATCAC TGTATTACTTAAATTCTTTGTTATTTCAGCAGCAAACACACAGATAAGTCACCATCTTGA TGCTTGTTGTATTGTGTATACTATATATCTCCAGAAACATATGGACAGCTAGCTTGACTA GGCTCGATTAGTTGATCTGGTCGACGACTAATTGTGACTAGTCAACTGGTCGGTAGCTAA ATGACTAGGCTCGACTAGACGACTTGAAAACATTGTTGTTGCATATCATTATCGGTGCAT ATACTTTAAGAAGGGCATGCCTGGTGCAGTGGTGCGAGACTGAGTCACCATGTCGTGGGT TCGAAGCAGTCTCTCCGCATTTATGGGGAAGTCTTGCCTCGGCTTATTATCCCTTCTCTA GACCTCACTCATTGGGAGTCTCTGGCACTGGGTCTGTCCCTTCTTTAACTAGTTGACAAA CTTGGAAGATTGAACGTAAGGTAGTAGTTCTATGAAAACAGAGATGCATTTTTAGATGTT CTATAATATGAATTAAAGGTGCATGGAAATTGCCGTACATTTCATATATGAATTTAAAGC ACTTAGGCTTGGTTTCTACTCCCTCATATCCAAATTTTAAGCCACTTCGTCGGGAGCCAT TTGTTTTGTCATCACTTCGTCGGGAGCCATTTATTTTGGGTCCCTACACGCCTCAGCTGA GAAACGTCAACATGCCTGCACCATACATGCATTCTGGTTAATTGGGACAAATTAATAGTT TTTTTGAAACAAATAGACACATTAGATTGATTAGTTGCAAGCTAGGATGAACAGGAGTTA CCGGGTTAGGGACGATGGTCACTCACTGTCGCGAATCCGTCCATCCCTCTCAACCTGTGG CTGCGGCAGAGCATCGCCATGGCCGATCACGTCGATCGCCGCTGCCATCTTGCCCCGCTG TTCTGAGCGATCTGCATGCTGACCAATTCAATCTTCTCTCCCTTCACATTCCTTCTATAT ATTTTATATCATGCACACATGATTGTAGCCAATGCAAACCATTGTGCCTTTTTTCTGTTC AGTATGACAGATGATGACATCAGGAAGATACATGGAAACCACAAACAAGAGGAGAGAAAG GAAGGTTTAGTATACACAGGAGAAGTTTACGTGACCGAGTCAATAAGCACCAATAAAGAA AGAAACGTCTATGATGTTTGTTGAGTCTAGATGTGACACGTTCATCTTCAAGCAGGAAAG CAAATTGTTTATTTAATTAGAGTCGGACATGGCAATATGTGCAACTTACAAGAGCAAGAC AAGTCTACGGACGAAGTCTGTTTTGGGCTATGACGATCAGCATGAGAGGGACCGGTAGGT GGTGGTGGGGTTATTTTGGGAATCAAAAAGTGGTTGAAAGAAACACTTTTTATTCTTTAA TATTAGGTAGATATTTTTCTTGACATGAACGGACATGTTTTTATTAATGTATATGCAGCT GGGGATAGCCTGCTGTAGGAAGTTGTAGGACTGCGGGGTTGCACTGGTGTGGGTGGCAGA GAAAATAAAAAGGACTTGTGTTCCTTTTCAATTAAGCGAAATTAGCCTATGGTCTCTTTA TGACAGTAAGACTCACTCAATTTAGGGATAGAACAAGCTAATAACCTTATCTTTAATCTG GCACATGCTCAAGAGGCTGGGCCCCACCATTTTACACCCATCAAAATTATCACCAGCTTA ATAGCCTATACAAAACAAAAGTTTGAACTCTGAACTACATTTTCTAACCAGACAATGTAT ATTGTTGGAGCAAGCCATTTTCAGAAACTTTATTTGTCGTTGCAGTACTTTGTGGTAAAT ATAAAATCCAATGGACTTCTTTTGTTATATAAATCTTAATTGCATATTCTGTCTGCAACT TTTGGGAACCATCTGGAGTTCATTGGATCTGTTTGGGATTCATGATGATTTCCCCTACAT GTAACACCATCACTATGGGGTGGATGGCTTGTTGGCCACAAGCACAACAGCCTGCTTGAA CAACATTAGAAGCAATACTGCGGAGGCTTGTCCATCGATTTGCATGCTGATGCCTGATAA CATCCTCTCTTTATATAGAGAGGTGTACTTTGTCTCCGAAGCATCCAGGGGGCCTGGTGT TTATGGCTGCATCGCAATAGGGCGGTATTTGATGGTGCCAGCCCTTCTTTGAGCACCATT CAGAGGCTTCTTATGGATGAGGTGGAGTGCTGGTGTATGGCTGGTGCGAAGCAGATTGAG AGTCTTGGCCTCCTGGCTGTCTTTCTAGTGCCTAATGCTGTGAAAGTTGGAGATAAGAAT AGGTTTTGTCTGTTTTTCCTTTGTTTTTTTGCCTGTTATGGCATTGTACTGTGGTCCACT TCGGACCTTTCTCTCTTTTAATATAATGATGCGCAGTTCTCCTGCGCGTTCGAGAAAAAA AAATCTAATCTCATAACAAACCATATGTAGAAGATAGTAATGAAAATACTTCATTATCTT AACTTACTAATCTGCCAAGGGGCAAACAACATAATATGGCATGTGCTATAGCAATTTTGA GACCTTGATGCAAATGCTCTAGCCTTTTCTGTTGTGGGCGCTAGGCGGTAGAGGTGTGGT GGCAGTGGTGAAGCTTGACAGAACAGCAAGTTCCTTGCCTTGCTGACCTCGTGTCCCTGG AGCCTATAGAAACATGGCACATTGAGAGAGAGAGATGGAGGCTGATTAGGACTGAATTCT TGCCTGCCTTATTCCTTTATCCTTGCTCCCTTAGAGGAGCTTACAATTGAATGACTCAAT CGCTGACAACACTTTATGATATAACTTCGAAGTGAGTGTAAATGGCAAGCTGTAAAACAC ACATGGCACTTTCTTTTTCTGTGCCAATTCTCTTGATCAAGCTGATGTTCCTGCCTGTCT CTTATTCTTGCAACATTCAAGTATGTGGCCCTACATAACATGTCCATTTTCTCCGTAGTT TACGTAATTTATGTAATGATGAATGTGATTTTGATCATGCCTATTTTATATTTTTGTTTA CTGCAGACAGTTTTCATGCTTTTGAAAAGTAAGTCAGAACAGGAACGTCGTTTGCTCACA GCTCTTGTTAACAAACTTGGTGATCCTGAAAGGAGAGCAGCATCAAGTGCTGCATATCTG TTAACATGTCTCTTGGCTGCTCACCCTAATATGAAGATGGTGGTGATAGATGAGGTGGAT TCTTTTCTCTTCAGACCACATGTTGGACTTAGGGCCAAGTACCAGGCTGTCAATTTCTTG AGCCAGATTCTTCTTACAAACAAGGGAGATGGGCCTAAAATTGCAAAACGGTTGGTGGAT GTCTACATTGCACTTTTCAAGGTACTAATGAGCTCTGGTGATACCAAAGGAGATACATAT AGCAAGGACAGCAAGAAAAAGGTAGGAAAAATAGAGGGAGGAAATAACAAGATGGACTCC AGATCCAAGGGAAACAATGAAGTGGGTTCAACAGCAGGATCAGATTTGGAGCTGGACTCC AGAATCCTTTCTGCGCTTTTAACTGGTGTAAATAGGGCATTACCATATGTTGCAAGCTCA GAAGTTGACGATATTGTGGAAGTGCAGACACCTATTCTTTTCAGATTGGTTCACGCTGAA AATTTCAATGTTGGTGTTCAGGCATTGATGCTTTTGTTCCAAATATCTATAAAGAATAAT ATAGCAAGTGATCGTTTGTACCGTGCATTATACTCAAAACTCTTGAGTCCTTCTGCTGTT ACTTCCTCAAAGCCAGAGTTATTTCTTGGGCTGTTGGTGAAAGCGATGAAGAATGATGTA ATGTTGAAGAGAGTTGCTGCTTTCTCAAAGCGGCTGCTGCAGGTGGCTCTTCAACGGCCT CCTCAATATGCTTGCGGATGCCTTTTCATTCTGTCAGAAGTCCTTAAGGCAAAGCCACCA TTATGGGGGATTGTGCTCCAGAATGAATCTGTTGATGATGGTGATGAACACTTTGAAGAC ATTTTAGAGATTCCCGAGGACTCTTCTGTTGCCTCAGCAGTGCTACATAAACATAATGAA AAAGTAGCTGCACATGAGAAACACAACCTTGATGCTGCTGATGGAATTGATAGTGTAAAA CAAGTAAATTTGGTAGATGAGAACAATGCATCAACTGACTCGTCCAGACAACATGCATTC TATGATCCACGACACAGAGAGCCTTCTTACTGCAATGCAGATCGTGTCAGTTGGTGGGAG TTAACAGTATTGGCTTCACATGTGCACCCTTCAGTTTCTACTATGGCTAGAACATTGCTA TCTGGCAACAATATTGTTTACAGTGGTGATCCGCTGACAGACCTATCACTTCCTGCTTTC CTTGACAAATTCATGGAAAAGAAACCAAAAGGGAACCGCATAGCTGAAGGAAGATGGCAT GGTGGATCACAAATTGCTCCGGCTAAAAAGCTTAATCTGAATCATCATCTCATCGGAGAG GAGCTTCTAGAATTGGCAGAAAATGAAGTGCCTCCTGAAGATATTGTTTTCCACCGTTTC TATTTGAACAAGACCGGCACTGTTAAGCGTAAGACAAAGCAGAAGGACTCAGTTCTTGAT GAAGATGCGGGGGAACTCTTAGCTGATAATGACGCTGATGAGGCTAGTGACGAGAGTGGA GATGAGATACTGGATCTGGGAGATGGGTTGGCAGATGATGGAGAATATGACTATGACGAC CTTGACTCAAATGCATTTGAAGAGGAAAAAGATTTACTTAGAGATGACAGTGATGTGGAA TTTGATGACGTTTCAGATGATACTGCATCTGGGGATGAAGGGTCAGAAAATGACGATGAC ATTCCTATTCTCGCGGGCGATTCAGATGGCAACTTAAGTGATGACGAGATGGTTGATGCT GGTAAGGGCGGTGTCTCTTACACAAAGAAAAGGAGGGCAGGGAAGAAGAGTGGGTTGTCT CCATTTGCAAGCCTGGATGATTATGAGCACCTAATGGTTGGGGATGCTGATGCAACAACA GCAAAGCGGAAGCACATGGCAACAGGGAGAGCTGGTGGTGAGAAGAAACCAAAGTTGAGA CCACGAAAGAAAAGGTCGCGGAGTTCAGAATGAGAAACATGCCTTTTACCCTTAACTCTT TTAAAATGTTCACCACAATGGTGTTCATTACATTTTTGTACTTCTGGAAGGCACAGGATT GGGTAACGCTATTGTTGAGCCGAGAATGTATTGAGATTAGATTATACAGGTGCTCTCATA TAGTAGTCCTTATCCCACACAACGCATTTATACG