Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028237_T015
CDS Infomation

cds chromosome:B73_RefGen_v4:1:27572970:27577271:1 gene:Zm00001d028237 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTGGCTTTAGACACAAGCAGCAGTGTTCGGGTAATTATTGTAGAGTTCAAGAATCA
TCACCAGGAGGTCCAGAACTAAAATGTTTGGAAGCTGTAGAAGCATTCAATGAGGGCAAG
GTTGAAGAACCTGCCTGTACAAGTTGGCACACCACACATACATCAAATAAGAGCAGAAGA
AGCAATAAAAACGAGCGGGAAGATGCCTCTGTGGAGTTCCTTCATGTTGCACATAATGCA
GTTGTCTGTTCAGGACTGGATTCCTCTTCAAAAGACAGGTCCAATAAGAAAATCAAAATT
TCAAAGGATGTTAACTCTGACCTTGGAAGGACAGAAACTGTTCAGGAAGCACCAAAACGC
AGAAGAACAGCTGTACTAGATAACCAAGAGTGCAGCAGACGGAAGAAAAGGAAACAAAGC
AATCGGTGTGGTTCCTATTCGGTAATAATTGAATGGTTGAATTACTATTGTCTTAGTGAG
TCGGATGAAGATGAGGTGCCGTTGATCAATAAGCGAACAGAAAGAAGGCGCCGACAAAGA
TTACATGAAATGTATCTAGCCAGGGAATCCAATGATGTTGAGTTTGGCAGCTCAACTTCT
CATAAGGTTGGTTCTTGCTCACTAGCTCCCAAGGACAATAACAAAGGTGAAAGTGTGCCA
GCTTCTCAACCTGAAGAAAGATCCTGCTCAAGTCATCCTGTGAGTAGCAACGGAGTTGCT
GGAAATCAAGCTGGTCATGAACATATGTCTTCTCCAACGGATTCACCAATTAGAGGTGAA
ATTGTAGACATTTCAGATGGTTGA

Peptide Sequence

PEP ID

Zm00001d028237_P015
PEP Infomation

pep chromosome:B73_RefGen_v4:1:27572970:27577271:1 gene:Zm00001d028237 transcript:Zm00001d028237_T015 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFGFRHKQQCSGNYCRVQESSPGGPELKCLEAVEAFNEGKVEEPACTSWHTTHTSNKSRR
SNKNEREDASVEFLHVAHNAVVCSGLDSSSKDRSNKKIKISKDVNSDLGRTETVQEAPKR
RRTAVLDNQECSRRKKRKQSNRCGSYSVIIEWLNYYCLSESDEDEVPLINKRTERRRRQR
LHEMYLARESNDVEFGSSTSHKVGSCSLAPKDNNKGESVPASQPEERSCSSHPVSSNGVA
GNQAGHEHMSSPTDSPIRGEIVDISDG

Transcript Sequence

Transcript ID

Zm00001d028237_T015
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:27572970:27577271:1 gene:Zm00001d028237 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGGGGGGTACGTGTGTGTGGCTGTGTGGGTCTGAGATTTGTCCTGTCATGTTATCTAGT
GAAGGCCTCTCGAATGTCCCTGGTGGTAATTCAGGAATCATCTACCATAAACAATTATGT
ATTCTCGTTGAATTTATTTTTGAGACACAGTTATGCAATCTTTGCATTAGGTTTGTTAAA
CACTGGGCATTTTCCCTTCTATTGCACATTGACCGTTTATAGCTTCACGTCTTCTTACAG
ATTTCAGTGGTATTAATGTGTAATTTTGATGAATAACATTAACCACTTCCAGTATTTATT
TTCAAATCGTTTCTGCATGGCCTGGCACTTGATATATGTGCATGTGCTGTAGCTGGATAA
TTTGCTTATGGTACATCTTAAAGCCACTGCATAAAATGCAAACATTAATCCGTACATTTT
AGCATCAGACTACTAATTCTGCATTACAATTAAATGAATTTGTGAAGTACAACTTGTGAA
ATATTTTGAAATGGTATATTGTTTGCCACCCTCAAGTTTGTCATTGAACTGTTGAAGTAC
ATGTTAGCTGACTTTAGCAGAAGATTGGTGTTTTTGTTTCTTAATTATCTTCCTGCAGTG
ATGTAAGCACATGTGACTATTATCCGGGAGGTGGTGGCTGTATAATACTGCTTTCCAAAT
CATTATGCGGGTCTCATAATGGATCTGATCTGAAGAATGCTTTGCTTCATGAGATGATTC
ATGCCTATATTTGCATCAAAGACAATAACAGTAACCATAGTGATCATGGTGCAAAATTTC
AGAAACTGATGAATACAATCAATTTGAGTTCTGTAGCTGATCCCCATCGACCAGTTGATG
GCTACAGCATAACTCTGCTCCATGAGATCCATAAGAAATATTATCACTACAAAGTAAGAA
TCAGGATTGCAATAAGCACACTTTAACCTATATTTTTCACATTAACATCTAGCAACCTGT
GCAGTGTCAAAGCTGTGCAGATTTTATCAAGTCAACCAATATGAGAGGACCTTCTGGTGA
TGACTGCATTGAGAGAAAAGGTGTAGATGACCCATGTCATAATTCTAACTGTCACTGGCA
TAGGTATGGTTATGCACTTCATTTGATTGATTGCAATATTTGGTCTTTCTTGTCTACTCT
GTCAAAAGTAAGAGTACATCTGATTGATTGCAGAAATCTAAGGTAATAATGAAACTTTTC
AGCAAAAATCACAGCCTTGATTCCAACAATGACAGGCCACATCAGCACACGTTTGAATTA
GGGTTTATACATGCGCTTAAGCCATTGAGGGCACATATAGTTAAGTTAAAATTAGTAGTT
GTCAAACCATTTTGAAGTCATGCATTCAACAAGGAAGCTGATGTATCCTTGAAAAAGGAA
GCTTGTGGGTTTGGATGATAGCATGTATGTCATCTGTTGGGTTCTAACAGGTGGAACAAT
TGAGGTACAATAATGAGACAAATGTGAAACAGTGGCTCTCAAATATCTTGTCAACTGTCC
TCTCACCCCGTTCCGGCGAGGATATTTATAGGGTAACCAAGGGATAACCCCCTAAAGTAC
AGACTTGCCCTTGGTTACTTGCTACATCCTAGTTTTTGTCGTACAGCAATGTAAATAGGG
ACTGCTACATTCTGTCGGTCCAAGTATTAAATGCACCCATTCATATACCCCCATTGGGAT
AACGGTGTGCTTGATACTGACGGATGGGCCTGTTGCGGTCGACAGGTGGCCCATCTTGCC
CGCACCACTTAGGTATTACTCCTCAGCCCTAAGTGTGGGATGCCTTCAAGACGAGGTCTT
CGGCACTACTCATGTGATCCACGTCCGGGCCTCGCCTGCTCGATTGGTGGTCTGCGGACT
CCGCCCATGGCGAGGTCTTTGTCGTGGCCTTCAAGGCCCATGTCGAGAGGTTGCGGTCGT
AGGCGTCAATCAACATCGAAGGGCTTGTCCCATGATGGGCAGTCTCTTCAGCCATCCTTG
CGGCCTTCGATGATCCCTTCACTCGTGGGTGGCCAATGGCCTGGGCAAGGTCCGTGTCGT
AGCCTCCTCAGCCTTCGGCGGGAGGATGATAGTCGGAGGCATTGTCCCATGCCAACGGAT
GAATCCAACATAAGCGAAGTTCCTCAAACATTCCTTGCGGCCTTCGAACCTTACGTTCAT
GGTAGCGAAGACTACTAAGTGATTAGTCGTAGTCAATCGGGTCTATGATCGACGTCTCGT
TCAGCCTTCTCCCCAACACCATTGGAACTTAGTTGGATATCAATGTATTTGAAGTCAGCC
TCTCCTAATTTTTTTGTCATGAAGAGAAGCAACATAATTGAGCTGTTTTTAGGTGTAGGT
CTAATAATCTCAACCTTAGTAATTGTAATAAATTAGCAAATGTGTCTATGTGTTGCAAAA
GAACATACAGCTTGTTGCGCGGTCACATGGGCGATTTGTGGCTTGGAGGTTTATTTAATG
GCTGCCATCTGTTTCAATAAGTTTCGTAATCTAATCATGTAAGTCTGTATCATTGCTTGA
GACATGGAATCGGATATTGCACCGTCGTTGGATGCACATTGTTCTAACTTGGCATCACAT
ACGGGACGGGAGAGGGAGGGTCATGAGAGCACTATGGGAAGTAAAAAATACGGACGATAT
TAGGTATAGGTATGCCAATTTAACTACATATTTTATGTCTTATTCATATTCAACTCCAAA
TATATATTTGGATTATATCCAAATCTGAAGCATAATAACTCTTTGTATATAACATCTTAT
CAAATGAGCACGTGTTGGATTCATGCTTTGAATGTTTTTGTCTATTCATATTAATGTATT
TGGATGTTTGGCTTTAGACACAAGCAGCAGTGTTCGGGTAATTATTGTAGAGTTCAAGAA
TCATCACCAGGAGGTCCAGAACTAAAATGTTTGGAAGCTGTAGAAGCATTCAATGAGGGC
AAGGTTGAAGAACCTGCCTGTACAAGTTGGCACACCACACATACATCAAATAAGAGCAGA
AGAAGCAATAAAAACGAGCGGGAAGATGCCTCTGTGGAGTTCCTTCATGTTGCACATAAT
GCAGTTGTCTGTTCAGGACTGGATTCCTCTTCAAAAGACAGGTCCAATAAGAAAATCAAA
ATTTCAAAGGATGTTAACTCTGACCTTGGAAGGACAGAAACTGTTCAGGAAGCACCAAAA
CGCAGAAGAACAGCTGTACTAGATAACCAAGAGTGCAGCAGACGGAAGAAAAGGAAACAA
AGCAATCGGTGTGGTTCCTATTCGGTAATAATTGAATGGTTGAATTACTATTGTCTTAGT
GAGTCGGATGAAGATGAGGTGCCGTTGATCAATAAGCGAACAGAAAGAAGGCGCCGACAA
AGATTACATGAAATGTATCTAGCCAGGGAATCCAATGATGTTGAGTTTGGCAGCTCAACT
TCTCATAAGGTTGGTTCTTGCTCACTAGCTCCCAAGGACAATAACAAAGGTGAAAGTGTG
CCAGCTTCTCAACCTGAAGAAAGATCCTGCTCAAGTCATCCTGTGAGTAGCAACGGAGTT
GCTGGAAATCAAGCTGGTCATGAACATATGTCTTCTCCAACGGATTCACCAATTAGAGGT
GAAATTGTAGACATTTCAGATGGTTGAGTGCAAGAGTTCCGCGTTAGTTCCTTGTAGCTG
GATCCTGGATGAAATAATATACAGTGTAATGGCTATAAAGACCCTGGGTTTTCCTATGCA
CCTTCCAACTGCTAGACATGCGCACACTGCCAAGCAGCCTTTGTACTGTTTTCCCCCCTT
CATCTAGCCTTTGTATATAAGCTTATTTGTTCCTT