Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028221_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:27049419:27051494:-1 gene:Zm00001d028221 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ATP synthase4 description: ATP synthase4
Sequence

ATGGCTTCACTGCCTCTATGCCGCTCGCCGTCGTCCCTACTACCCTCATGGCCTCACCGG
CCAATCTCCGCCTCCTTCAACCCAAAGAATCCCTCCTCCCCTGTCGCTGCTCACGTCTCC
GTCCAGGAGACGCCTCCCCAACCTCAAGACCCGTCGCCTCCCTCTGATTCCAACCCAAAT
GGCACAAGGCCCAGCAGCAGCAGCAACACGAGGTTCCTGTGGGTCAACCCCAACAGCCCG
CGCGCCGCCGACGTCGCACGCGCGCGTGCCGGGTCTGGCCGCCGCGCACGTCTCGCTTCT
GCTGCCGCGGCGCTCGGCGCGTGCGAGACCACCGAGTCCGCTGTAGAGGCCGCGCTTCAG
GCGGCCTTCCCCGAGCCTCCTTCCGAGCAGGACGCCGTCATCGTGCTCAACACGGCTGCC
GCCACCAGGGCGGAGACCGCCGTGCTCGCTCTCCGCTGGTTCCTGGGGAACGCCAAGGTC
CGGAAGAAGGTCATCCTCTACAACGTCGTGCTCAAGTTGCTGCGCAAGAAGCGGCTCTGG
AGTGAGACCGAGGCGCTATGGGCCGAGATGCTGCGGGACGGCGTGCAGCCCGACAACGCC
ACCTTCTCGACCGTCATCAGCTGCGCGCGCGCCTGCGGCCTACACAGCAAGGCCGTCGAG
TGGTTCGACAAGATGCCGGAGTTCGGCTGCTCGCCGGACATGCTCACATACTCTGCGGTG
ATCGACGCGTACGGCCACGCTGGGAACTCCGAGGCGGCCCTCCGCTTGTACGATCGCGCT
CGCGCGGAGAAATGGCAGCTGGACCCTGTGATCTGCTCTACAGTGATCAAGGTACACTCG
ACCAGTGGCAACTTCGACGGTGCACTCAACGTGTTCGAGGAAATGAAGGCAATCGGTGTG
AGGCCAAACCTGGTCGTGTACAATACCATGTTGGATGCCATGGGCCGCGCATTGCGACCT
TGGGTGGTGAAGACCATCCACAGAGAGATGGTTGACCAGCAGGTGCAGCCCAGCAGGGCG
ACCTATTGTTGTCTCCTGCACGCATACACCAGGGCACGCTATGGCGAGGATGCCATGGCC
GTGTACCGACTGATGAAGGATGAGGCAATGGGCATCGATGTGATGCTGTACAACATGCTT
CTGTCCATGTGTGCAGACATTGGCTATGTTGACGAGGCTGAGGAGATCTTCAGAGACATG
AAGGCGTCCATGGGTGCCCATTCCAAGCCTGATAGCTGGAGCTACTCATCAATGGTGACG
CTGTACTCATCCACTGCCAACGTCCTGAGTGCAGAGGGCATACTGAATGAAATGGTGGAG
GCCGGCTTCAAGCCAAACATCTTTGTCCTGACCTCACTCATCCGATGCTATGGCAAGGTG
GGGCGCACTGACGATGTGGTCAGATCATTCGGCATGCTCCAGGACCTTGGTATCATCCCC
GATGACAGATTCTGTGGCTGCCTTCTCAGCGTGGCAGCAAACACACCAGCGGAAGAACTG
GGCAAGGTGATCAGCTGCATTGAGAGAAGCAACGTCCAGCTTGGTGCCGTAGTGAAGCTC
CTTGTGGACAGGAGCTCCTCTGAATCTTTTAGAGAAGCAGCCCGTGAACTGCTGAGGAGC
TCCCGCGGCGTGGTGAAGATGCCTTACTGCAACTGCCTGATGGACCTATGCGTGAACCTG
AACCAGATGGAGAAGGCCTGCGCGCTCCTGGACGCCGCACAGCAGCTCGGCATCTACGCC
AACATCCAGACGAGGACCCAGACACAGTGGTCGCTGCACCTCAGGGGCCTCTCCGTCGGC
GCGGCACTGACCACATTGCACGTCTGGATGAACGATCTGTATACGTCTCTACAGACCGGC
AACGAAGGGCTGCCACCATTGCTTGGAATCCACACGGGGCAGGGGAAGAACACGTACTCG
GACAGAGGGCTGGCTGCTATGTTCGAGGCGCATCTGAAGGAGCTCGACGCGCCGTTCCAC
GAGGCACCCGACAAGGCAGGCTGGTTCTTGACGACGAACGTTGCTGCTAAGCAATGGCTG
GAGTCGAAGGCGGCATCAGAACTAGTAACTGTGTAA

Peptide Sequence

PEP ID

Zm00001d028221_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:27049419:27051494:-1 gene:Zm00001d028221 transcript:Zm00001d028221_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ATP synthase4 description: ATP synthase4
Sequence

MASLPLCRSPSSLLPSWPHRPISASFNPKNPSSPVAAHVSVQETPPQPQDPSPPSDSNPN
GTRPSSSSNTRFLWVNPNSPRAADVARARAGSGRRARLASAAAALGACETTESAVEAALQ
AAFPEPPSEQDAVIVLNTAAATRAETAVLALRWFLGNAKVRKKVILYNVVLKLLRKKRLW
SETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAV
IDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAIGV
RPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMA
VYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVT
LYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFGMLQDLGIIP
DDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLLVDRSSSESFREAARELLRS
SRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYANIQTRTQTQWSLHLRGLSVG
AALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEAHLKELDAPFH
EAPDKAGWFLTTNVAAKQWLESKAASELVTV

Transcript Sequence

Transcript ID

Zm00001d028221_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:27049419:27051494:-1 gene:Zm00001d028221 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ATP synthase4 description: ATP synthase4
Sequence

ATGGCTTCACTGCCTCTATGCCGCTCGCCGTCGTCCCTACTACCCTCATGGCCTCACCGG
CCAATCTCCGCCTCCTTCAACCCAAAGAATCCCTCCTCCCCTGTCGCTGCTCACGTCTCC
GTCCAGGAGACGCCTCCCCAACCTCAAGACCCGTCGCCTCCCTCTGATTCCAACCCAAAT
GGCACAAGGCCCAGCAGCAGCAGCAACACGAGGTTCCTGTGGGTCAACCCCAACAGCCCG
CGCGCCGCCGACGTCGCACGCGCGCGTGCCGGGTCTGGCCGCCGCGCACGTCTCGCTTCT
GCTGCCGCGGCGCTCGGCGCGTGCGAGACCACCGAGTCCGCTGTAGAGGCCGCGCTTCAG
GCGGCCTTCCCCGAGCCTCCTTCCGAGCAGGACGCCGTCATCGTGCTCAACACGGCTGCC
GCCACCAGGGCGGAGACCGCCGTGCTCGCTCTCCGCTGGTTCCTGGGGAACGCCAAGGTC
CGGAAGAAGGTCATCCTCTACAACGTCGTGCTCAAGTTGCTGCGCAAGAAGCGGCTCTGG
AGTGAGACCGAGGCGCTATGGGCCGAGATGCTGCGGGACGGCGTGCAGCCCGACAACGCC
ACCTTCTCGACCGTCATCAGCTGCGCGCGCGCCTGCGGCCTACACAGCAAGGCCGTCGAG
TGGTTCGACAAGATGCCGGAGTTCGGCTGCTCGCCGGACATGCTCACATACTCTGCGGTG
ATCGACGCGTACGGCCACGCTGGGAACTCCGAGGCGGCCCTCCGCTTGTACGATCGCGCT
CGCGCGGAGAAATGGCAGCTGGACCCTGTGATCTGCTCTACAGTGATCAAGGTACACTCG
ACCAGTGGCAACTTCGACGGTGCACTCAACGTGTTCGAGGAAATGAAGGCAATCGGTGTG
AGGCCAAACCTGGTCGTGTACAATACCATGTTGGATGCCATGGGCCGCGCATTGCGACCT
TGGGTGGTGAAGACCATCCACAGAGAGATGGTTGACCAGCAGGTGCAGCCCAGCAGGGCG
ACCTATTGTTGTCTCCTGCACGCATACACCAGGGCACGCTATGGCGAGGATGCCATGGCC
GTGTACCGACTGATGAAGGATGAGGCAATGGGCATCGATGTGATGCTGTACAACATGCTT
CTGTCCATGTGTGCAGACATTGGCTATGTTGACGAGGCTGAGGAGATCTTCAGAGACATG
AAGGCGTCCATGGGTGCCCATTCCAAGCCTGATAGCTGGAGCTACTCATCAATGGTGACG
CTGTACTCATCCACTGCCAACGTCCTGAGTGCAGAGGGCATACTGAATGAAATGGTGGAG
GCCGGCTTCAAGCCAAACATCTTTGTCCTGACCTCACTCATCCGATGCTATGGCAAGGTG
GGGCGCACTGACGATGTGGTCAGATCATTCGGCATGCTCCAGGACCTTGGTATCATCCCC
GATGACAGATTCTGTGGCTGCCTTCTCAGCGTGGCAGCAAACACACCAGCGGAAGAACTG
GGCAAGGTGATCAGCTGCATTGAGAGAAGCAACGTCCAGCTTGGTGCCGTAGTGAAGCTC
CTTGTGGACAGGAGCTCCTCTGAATCTTTTAGAGAAGCAGCCCGTGAACTGCTGAGGAGC
TCCCGCGGCGTGGTGAAGATGCCTTACTGCAACTGCCTGATGGACCTATGCGTGAACCTG
AACCAGATGGAGAAGGCCTGCGCGCTCCTGGACGCCGCACAGCAGCTCGGCATCTACGCC
AACATCCAGACGAGGACCCAGACACAGTGGTCGCTGCACCTCAGGGGCCTCTCCGTCGGC
GCGGCACTGACCACATTGCACGTCTGGATGAACGATCTGTATACGTCTCTACAGACCGGC
AACGAAGGGCTGCCACCATTGCTTGGAATCCACACGGGGCAGGGGAAGAACACGTACTCG
GACAGAGGGCTGGCTGCTATGTTCGAGGCGCATCTGAAGGAGCTCGACGCGCCGTTCCAC
GAGGCACCCGACAAGGCAGGCTGGTTCTTGACGACGAACGTTGCTGCTAAGCAATGGCTG
GAGTCGAAGGCGGCATCAGAACTAGTAACTGTGTAA