Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028208_T041
CDS Infomation

cds chromosome:B73_RefGen_v4:1:26429383:26434636:1 gene:Zm00001d028208 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RIK

Sequence

ATGATTGAGGAAATATTGAAACAAGGAACAACCTCAGAGTCCATATCGGTCCCTTTCTCC
TCTAGCACTGGACAAGCTGTTCGTCCTTTTAGTGCCTCAGTTTTTTTGGGTTTTGATGCA
GATCCATCATTGAATATCACAGCTCGAATCCGTGGTCCAAATGATCAGTACATAAATCAT
ATCATGAAAGAAACAGGGGTTACTGTTGTACTAAGAGGAAAAGATTCGGAGAATCTTGGC
AGTTGTCATAGTGAAGCCTCACAACAACCTCTACACCTATACCTCACAAGTATGCATTTA
AAGAACCTAGAAGCTGCAAAAGTTTTGGCAGAGAACCTCCTGGATACAGTAGCAGCAGAA
TTCGGTGCTTCCAGAATTTCTTCTTCAAAAGTATATGGTGCTGTTCCACCTCCTCAGCAG
TTGTTAGCTGGTGTCGACACCTCAGGAACGAAATCAGATGTTCACTATATTGTAGGGCCC
AATGTGTTATCGGGAGCTACACATTCCTTTGCATCTACTGGAGTTATTGCTCCTGTTGTT
GCTCCTGCAGTGACAGTGCAATCAGGGGCTCCAACATATTCTGGGGTTCCACTACCCAGT
AACATGGCCTATCCTATTCCACCAGCAAACGGTGGGGCATTTTACAGTGGTTATGGGGAC
ATTTATCCCCAAGCAACTCCGTTGCAGCAGCTGGCATTCACACTCAAGCATGCCTCATCG
TCGGCAACTCAGGCTGTTCCAGTGACGTCCACACCAACAAGCATGGCTACAAAGGGGAAC
TCAATCTTGGATGCGGAGATGGATAAACGATCCCGAAGGAAATTCCAGGAACTACCGGTT
TCGAAGGGCCCAGCAACAGAAAGTCAGAACTCACAACAGGGGTCCAAATTTGTTAAGACA
GGTTTAGATAGTTCAGGTAACATTGGGAGCTCATCAATTGCACCTCCGAAGAAAGTTCAC
CCTGGATCAAATGGAATGCTTCCGCAAGAAGAAGCGGATATGCCATCACATCTCTCTATA
TCCACTAAGATGCTACCACCACCCCTGAAGAGCATGCTGCCACTGCCACCCAGAAGCATG
CCCCCACCACCACCTAAGAGCATGCCTCCACCGCCACCAAAATTTCCTTCAGATGAGTTT
TTGTCAAGAAACGAGAACAAGTTTTTTCCTTTAAAGGAGCCAACAGCACCTCCAAGGTCC
TTTGATGCAATATCAGTCTTGCCATCTGAACGACGACCAAGGGAGCCTAAGGAGGAAAAA
ACAAAAGGCACACCTGTGTCTGATACTTTGCTGAAACTTATTGATTATGGAGATGACGAC
GATGACGGCGATATTGATGTGACAGACAACACACCTAAGGGCAATCCAACTCCTGGTTCA
GAGCAGAAACCATTTTGGGCTGTTTAA

Peptide Sequence

PEP ID

Zm00001d028208_P041
PEP Infomation

pep chromosome:B73_RefGen_v4:1:26429383:26434636:1 gene:Zm00001d028208 transcript:Zm00001d028208_T041 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RIK

Sequence

MIEEILKQGTTSESISVPFSSSTGQAVRPFSASVFLGFDADPSLNITARIRGPNDQYINH
IMKETGVTVVLRGKDSENLGSCHSEASQQPLHLYLTSMHLKNLEAAKVLAENLLDTVAAE
FGASRISSSKVYGAVPPPQQLLAGVDTSGTKSDVHYIVGPNVLSGATHSFASTGVIAPVV
APAVTVQSGAPTYSGVPLPSNMAYPIPPANGGAFYSGYGDIYPQATPLQQLAFTLKHASS
SATQAVPVTSTPTSMATKGNSILDAEMDKRSRRKFQELPVSKGPATESQNSQQGSKFVKT
GLDSSGNIGSSSIAPPKKVHPGSNGMLPQEEADMPSHLSISTKMLPPPLKSMLPLPPRSM
PPPPPKSMPPPPPKFPSDEFLSRNENKFFPLKEPTAPPRSFDAISVLPSERRPREPKEEK
TKGTPVSDTLLKLIDYGDDDDDGDIDVTDNTPKGNPTPGSEQKPFWAV

Transcript Sequence

Transcript ID

Zm00001d028208_T041
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:26429383:26434636:1 gene:Zm00001d028208 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RIK

Sequence

AACAGATTCAGAAATGCACAAACACTGTCATCATTACCAGGGGAAAATATCACCCTCCAA
ATTTACTTCCTGATGGTGAGAAGCCCCTCTATCTACATATCTCTGCTGGATCTCAGTTGA
AAGATACTGCTGAGCGCATTAAGGCAGTTGATCGTGCAGCTTCAATGATTGAGGAAATAT
TGAAACAAGGAACAACCTCAGAGTCCATATCGGTCCCTTTCTCCTCTAGCACTGGACAAG
CTGTTCGTCCTTTTAGTGCCTCAGTTTTTTTGGGTTTTGATGCAGATCCATCATTGAATA
TCACAGCTCGAATCCGTGGTCCAAATGATCAGTACATAAATCATATCATGAAAGAAACAG
GGGTTACTGTTGTACTAAGAGGAAAAGATTCGGAGAATCTTGGCAGTTGTCATAGTGAAG
CCTCACAACAACCTCTACACCTATACCTCACAAGTATGCATTTAAAGAACCTAGAAGCTG
CAAAAGTTTTGGCAGAGAACCTCCTGGATACAGTAGCAGCAGAATTCGGTGCTTCCAGAA
TTTCTTCTTCAAAAGTATATGGTGCTGTTCCACCTCCTCAGCAGTTGTTAGCTGGTGTCG
ACACCTCAGGAACGAAATCAGATGTTCACTATATTGTAGGGCCCAATGTGTTATCGGGAG
CTACACATTCCTTTGCATCTACTGGAGTTATTGCTCCTGTTGTTGCTCCTGCAGTGACAG
TGCAATCAGGGGCTCCAACATATTCTGGGGTTCCACTACCCAGTAACATGGCCTATCCTA
TTCCACCAGCAAACGGTGGGGCATTTTACAGTGGTTATGGGGACATTTATCCCCAAGCAA
CTCCGTTGCAGCAGCTGGCATTCACACTCAAGCATGCCTCATCGTCGGCAACTCAGGCTG
TTCCAGTGACGTCCACACCAACAAGCATGGCTACAAAGGGGAACTCAATCTTGGATGCGG
AGATGGATAAACGATCCCGAAGGAAATTCCAGGAACTACCGGTTTCGAAGGGCCCAGCAA
CAGAAAGTCAGAACTCACAACAGGGGTCCAAATTTGTTAAGACAGGTTTAGATAGTTCAG
GTAACATTGGGAGCTCATCAATTGCACCTCCGAAGAAAGTTCACCCTGGATCAAATGGAA
TGCTTCCGCAAGAAGAAGCGGATATGCCATCACATCTCTCTATATCCACTAAGATGCTAC
CACCACCCCTGAAGAGCATGCTGCCACTGCCACCCAGAAGCATGCCCCCACCACCACCTA
AGAGCATGCCTCCACCGCCACCAAAATTTCCTTCAGATGAGTTTTTGTCAAGAAACGAGA
ACAAGTTTTTTCCTTTAAAGGAGCCAACAGCACCTCCAAGGTCCTTTGATGCAATATCAG
TCTTGCCATCTGAACGACGACCAAGGGAGCCTAAGGAGGAAAAAACAAAAGGCACACCTG
TGTCTGATACTTTGCTGAAACTTATTGATTATGGAGATGACGACGATGACGGCGATATTG
ATGTGACAGACAACACACCTAAGGGCAATCCAACTCCTGGTTCAGAGCAGAAACCATTTT
GGGCTGTTTAAAACTGGGTCTGCTAACGTAGTCTAGTGTGAATTCTTGTTGATAAGGATG
CTTGCTGCCTTGGTGCATCTTCTGAATTGAAGAGGCAATCGAGCTCCTTGTTCGTGTACT
GTAGTAATTCTAACAGGCAATGAGATTTCTTTGAACTTGTATTCATTCTGGCCTAGTCAA
AATGAACCGTTTGTTGTTTTGGT