Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028189_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:25769858:25774094:-1 gene:Zm00001d028189 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

ATGGCCGCGGCGTCGTTCGCCCGCGCCTTATGTCTCCACATGCTCCTCCTCTTCCTCGTG
GTTGGCTCGGCGCGCTGCAAGACGGTGAAGAGAGACGTGAAAGCATTGAATGAGATCAAA
TCTTCACTAGGCTGGAGAGTTGTATACTCATGGGTCGGTGATGATCCTTGTGGGCATGGT
GATCTACCCCCCTGGTCTGGTGTGACATGTTCTCAGCAAGGGGATTACAGAGTTGTGACG
GAACTGGAAGTCTATGCTGTATCAATAGTTGGCCCTTTCCCAACAGCAGTAACTAACCTG
TTGGATCTAAGAAGATTGAACCTGAGGTGGAATAAGCTTCAAGATGTGCTTCCACCTGAA
ATTGGTGAACTGAAGAAACTGACACACTTGTATTTGAGCTTCAACAACTTCAAAGGCGAG
ATTCCAGTGGAGCTTGCAAACCTGCCAGAACTCCGTTACCTTTATCTTCACGAGAACCGC
TTCACCGGGCGAATCCCCCCTGAACTTGGAACGCTAAAGAACCTACGTCACCTCGACGTG
GGCAACAACCACCTGACAGGCACTCTCAGGGATTTTATCGGCAACGGGAACGGCTTCCCG
TCCCTGAGAAATCTATACCTTAACAACAATGAGCTGACTGGTGTGCTGCCAGACCAGATT
GCAAACCTGACAAACCTTGAGATTCTGCACTTGTCCAATAACAAGATGATCGGGTCGATA
TCGCCTAAGCTAGTTCACATTCCAAGGCTGATCTACTTGTACTTGGACAATAACAACTTC
ATTGGGAGGATACCGGAAGGGTTGTACAGGCATCCATTTCTGAAGGAGCTGTACATCGAA
GGAAACCACTTCAGACCAGGAACCAGATCGAAGGGAACGCACAAGGTGCTGGAACTGCCT
GACGCCGACATTCTAGTCTAG

Peptide Sequence

PEP ID

Zm00001d028189_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:25769858:25774094:-1 gene:Zm00001d028189 transcript:Zm00001d028189_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

MAAASFARALCLHMLLLFLVVGSARCKTVKRDVKALNEIKSSLGWRVVYSWVGDDPCGHG
DLPPWSGVTCSQQGDYRVVTELEVYAVSIVGPFPTAVTNLLDLRRLNLRWNKLQDVLPPE
IGELKKLTHLYLSFNNFKGEIPVELANLPELRYLYLHENRFTGRIPPELGTLKNLRHLDV
GNNHLTGTLRDFIGNGNGFPSLRNLYLNNNELTGVLPDQIANLTNLEILHLSNNKMIGSI
SPKLVHIPRLIYLYLDNNNFIGRIPEGLYRHPFLKELYIEGNHFRPGTRSKGTHKVLELP
DADILV

Transcript Sequence

Transcript ID

Zm00001d028189_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:25769858:25774094:-1 gene:Zm00001d028189 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat (LRR) family protein
Sequence

GACAGGGTGACTCCGTGACCGTGAGTGCCTACCCGCCGACCGCACGAACCCCACTCGGTC
ACTCCCAGTCTCCATCTCCCACTACGGCACTACCCCATCCCCGGTGCGGCGCCACCTTCC
CGGCTTCCCCTTCCGACCTCCCCCCTCTCGTCACTTATGGTGCCCAGCCGCTCGCTGCGC
AACTACTAGCGCACCGTCCCCTCCTCAGCCATGGCCGCGGCGTCGTTCGCCCGCGCCTTA
TGTCTCCACATGCTCCTCCTCTTCCTCGTGGTTGGCTCGGCGCGCTGCAAGACGGTGAAG
AGAGACGTGAAAGCATTGAATGAGATCAAATCTTCACTAGGCTGGAGAGTTGTATACTCA
TGGGTCGGTGATGATCCTTGTGGGCATGGTGATCTACCCCCCTGGTCTGGTGTGACATGT
TCTCAGCAAGGGGATTACAGAGTTGTGACGGAACTGGAAGTCTATGCTGTATCAATAGTT
GGCCCTTTCCCAACAGCAGTAACTAACCTGTTGGATCTAAGAAGATTGAACCTGAGGTGG
AATAAGCTTCAAGATGTGCTTCCACCTGAAATTGGTGAACTGAAGAAACTGACACACTTG
TATTTGAGCTTCAACAACTTCAAAGGCGAGATTCCAGTGGAGCTTGCAAACCTGCCAGAA
CTCCGTTACCTTTATCTTCACGAGAACCGCTTCACCGGGCGAATCCCCCCTGAACTTGGA
ACGCTAAAGAACCTACGTCACCTCGACGTGGGCAACAACCACCTGACAGGCACTCTCAGG
GATTTTATCGGCAACGGGAACGGCTTCCCGTCCCTGAGAAATCTATACCTTAACAACAAT
GAGCTGACTGGTGTGCTGCCAGACCAGATTGCAAACCTGACAAACCTTGAGATTCTGCAC
TTGTCCAATAACAAGATGATCGGGTCGATATCGCCTAAGCTAGTTCACATTCCAAGGCTG
ATCTACTTGTACTTGGACAATAACAACTTCATTGGGAGGATACCGGAAGGGTTGTACAGG
CATCCATTTCTGAAGGAGCTGTACATCGAAGGAAACCACTTCAGACCAGGAACCAGATCG
AAGGGAACGCACAAGGTGCTGGAACTGCCTGACGCCGACATTCTAGTCTAGCAAGCTCGT
TTAGGGGACCTGAGGTCTTGGCGTCCTGCAGTAGTAGACTGCTGCCGGTACCAGGATCAC
TTCTGTCTGTCGCTGTACTATTCCGTGGCAAAACTACAGTTGAGAAAAAAAAATTCTCTT
GGAAAAAAAAGAGGCAAAAAAAAGTGAATAGTAGAGGCCACGGTCACACTGCCGTCATCG
TTAGATGAGCCATGAGTGTACAGGTTGTATTGTTCTGCCCTGCATCTTCGCTGTATGATG
GAGATGCCGGTCAGATGTAAAGCCAGCACATCGCATGGCACCGACAGTCCTGGTACAACT
AGTGGCCAATGATATGGCCTTTTTCGGAAGCAAATTTGGTGCCACCAATGCTTGAGAGCG
TGGGCATGTGGGGGAGGAGAATCCGCTAATACCAGGCTGGATCTGCCCTAAACTCTAGAA
CTGGGTCGTTTCTGTAGTAGGAACTTGCAAAAAAAAAAAAAGAAAAAAAGACCATGCAAA
G