Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028173_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:25305829:25316655:1 gene:Zm00001d028173 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 1
Sequence	ATGGCCGACTCCGCGCCGTCCATCCCGGGCGTCATCGCCTCCCTCCAGGCCTACTCCACG GCCCTCTCCGCCTTTACCGCCGCATGGCGTGCCGTCGAGACCCACGCCTCCACCCTCGAC TCCGCCCTCGCCGCCCGCCTAGCCGGCTTCTCGGAGCTCGAGCTGATCTGCTCGGCGATG GACGGAGCCGGCCTCCGCGCGTACCTCACCGAGCACAGGGACGAGCTCAAGGATCCCACG CGCGCCCTCGACGCAGCCCTCCAAGTTGCGCCCGACCCGGGGCTTCTGGTCCTCTCCGCG GCAGCGAGTTTCTGCCGCACGCTGCCGGAGGTGGCCAAGAGCGACGGTAGCGTCAAGGCG TCCTGCCGCCTGCTCATCGCCTTGCTCGACCGGCTGCGCGCGATTGGTGTCAAGCCGTCG CCTGAGGCGCGCGAGGAGGCCAGAGCTGTTGCGACGGACTGGAAGCGAGGCAAGCGGATC GGGACGGAGACGATGTTTAAGCAGGAGACGTTCGCCTTCTTGCATCTCGTGGGAGTGTTT GGGCTCGTGGAGGATGTGGGCGGTACCAGCGAGGTGCTTGATCTTGTCGTGTCGATCTCA GGTCGTGAGCGCGCCGTTGATGCGTTCGTCGTCCTGGGCCTGGACCTCGACCAGCATATG CCAATCCTCATTCAGAAAATGGTAAACAAAAACAAACAGCTAGAGGCAGTCAAATTCATT CAAGCTCTTAATATAGCGCACAAATACGCTTTGTTGCCTATTATGAGATCGTACATTGAT CATGCCGCAGTTGCTGGTAAGATGATCCGCATCAGGGGAGATGATCTTGCTACTCAGAAT GCAGCTGATGCAAAAGAGCGCACACTTATTGGAACATTGCAGAAGTTCATTAAGGAACAG AAGCTAGAAGAACTGCCCATTTTTGAAGAAGCTAACAAGCGAATGGCACATTTGGATCAG CAAAGTGCTGAGAGAAAAAGAACTGCTGCTGCAGCGGCTGCGGCTGCTCGAAAGGTTAGT AAGAACATTGAGGAGCAGCAGAAAAGGATACAGGAGCTGATGCAGCCTGCTAAGAGACCA AGGTCTGAGAATGTGGTGAAAGGATCTTCGGGCCAGAACGTGAACTTTGCTGGAACCTCT ACTCAACAGTTTAAGCCACAACAGAGCATTCATAAAGCTGGAGTGTCAAATCAGTATCAA GCTGCTTTAACCCAGAATGTACTGCCAGCAATCGCTCAGATTTCACAGCTAGTTGCTGGG AGCCATCGTCCAGTTGGCATCCCAAATCAGGCCCTTGCTGTTCCGCCTCAATATGGTAGT GGTAGTGCAAATTATTATGGAGTGACGTCCACCAGGCCATACAGGCCCATCACTCTACCT CCTGGACCTGGTGCTTTGAATGGTCCAAGTGCGCAGGCATCTTCAAGATCAAGGCTCTAT TCTGGAGATCCCCTTGCGGCTGTCTCCCGATCATCAGATAAGAAGGGATCGTCTTACAAG TATTCTTTGTCCAGTATGTCAACTTATGATCGTAAATGA

Peptide Sequence

PEP ID	Zm00001d028173_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:25305829:25316655:1 gene:Zm00001d028173 transcript:Zm00001d028173_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 1
Sequence	MADSAPSIPGVIASLQAYSTALSAFTAAWRAVETHASTLDSALAARLAGFSELELICSAM DGAGLRAYLTEHRDELKDPTRALDAALQVAPDPGLLVLSAAASFCRTLPEVAKSDGSVKA SCRLLIALLDRLRAIGVKPSPEAREEARAVATDWKRGKRIGTETMFKQETFAFLHLVGVF GLVEDVGGTSEVLDLVVSISGRERAVDAFVVLGLDLDQHMPILIQKMVNKNKQLEAVKFI QALNIAHKYALLPIMRSYIDHAAVAGKMIRIRGDDLATQNAADAKERTLIGTLQKFIKEQ KLEELPIFEEANKRMAHLDQQSAERKRTAAAAAAAARKVSKNIEEQQKRIQELMQPAKRP RSENVVKGSSGQNVNFAGTSTQQFKPQQSIHKAGVSNQYQAALTQNVLPAIAQISQLVAG SHRPVGIPNQALAVPPQYGSGSANYYGVTSTRPYRPITLPPGPGALNGPSAQASSRSRLY SGDPLAAVSRSSDKKGSSYKYSLSSMSTYDRK

Transcript Sequence

Transcript ID	Zm00001d028173_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:25305829:25316655:1 gene:Zm00001d028173 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 1
Sequence	AGGGACCTCACCGAGCACAGGTAGGGTTTCGGCCACCAGCCATGGCCGACTCCGCGCCGT CCATCCCGGGCGTCATCGCCTCCCTCCAGGCCTACTCCACGGCCCTCTCCGCCTTTACCG CCGCATGGCGTGCCGTCGAGACCCACGCCTCCACCCTCGACTCCGCCCTCGCCGCCCGCC TAGCCGGCTTCTCGGAGCTCGAGCTGATCTGCTCGGCGATGGACGGAGCCGGCCTCCGCG CGTACCTCACCGAGCACAGGGACGAGCTCAAGGATCCCACGCGCGCCCTCGACGCAGCCC TCCAAGTTGCGCCCGACCCGGGGCTTCTGGTCCTCTCCGCGGCAGCGAGTTTCTGCCGCA CGCTGCCGGAGGTGGCCAAGAGCGACGGTAGCGTCAAGGCGTCCTGCCGCCTGCTCATCG CCTTGCTCGACCGGCTGCGCGCGATTGGTGTCAAGCCGTCGCCTGAGGCGCGCGAGGAGG CCAGAGCTGTTGCGACGGACTGGAAGCGAGGCAAGCGGATCGGGACGGAGACGATGTTTA AGCAGGAGACGTTCGCCTTCTTGCATCTCGTGGGAGTGTTTGGGCTCGTGGAGGATGTGG GCGGTACCAGCGAGGTGCTTGATCTTGTCGTGTCGATCTCAGGTCGTGAGCGCGCCGTTG ATGCGTTCGTCGTCCTGGGCCTGGACCTCGACCAGCATATGCCAATCCTCATTCAGAAAA TGGTAAACAAAAACAAACAGCTAGAGGCAGTCAAATTCATTCAAGCTCTTAATATAGCGC ACAAATACGCTTTGTTGCCTATTATGAGATCGTACATTGATCATGCCGCAGTTGCTGGTA AGATGATCCGCATCAGGGGAGATGATCTTGCTACTCAGAATGCAGCTGATGCAAAAGAGC GCACACTTATTGGAACATTGCAGAAGTTCATTAAGGAACAGAAGCTAGAAGAACTGCCCA TTTTTGAAGAAGCTAACAAGCGAATGGCACATTTGGATCAGCAAAGTGCTGAGAGAAAAA GAACTGCTGCTGCAGCGGCTGCGGCTGCTCGAAAGGTTAGTAAGAACATTGAGGAGCAGC AGAAAAGGATACAGGAGCTGATGCAGCCTGCTAAGAGACCAAGGTCTGAGAATGTGGTGA AAGGATCTTCGGGCCAGAACGTGAACTTTGCTGGAACCTCTACTCAACAGTTTAAGCCAC AACAGAGCATTCATAAAGCTGGAGTGTCAAATCAGTATCAAGCTGCTTTAACCCAGAATG TACTGCCAGCAATCGCTCAGATTTCACAGCTAGTTGCTGGGAGCCATCGTCCAGTTGGCA TCCCAAATCAGGCCCTTGCTGTTCCGCCTCAATATGGTAGTGGTAGTGCAAATTATTATG GAGTGACGTCCACCAGGCCATACAGGCCCATCACTCTACCTCCTGGACCTGGTGCTTTGA ATGGTCCAAGTGCGCAGGCATCTTCAAGATCAAGGCTCTATTCTGGAGATCCCCTTGCGG CTGTCTCCCGATCATCAGATAAGAAGGGATCGTCTTACAAGTATTCTTTGTCCAGTATGT CAACTTATGATCGTAAATGAGGATTTGTTTTATCTGCCAGTGGACGAACCTAGTGAACCT TGAAAGTTTGGGTTTCAGACCAGAGATTTGGTCCCTCCGTAGATGTTAAGTCATTGTAGC TAACAATGGGCCTTTTTTACAGTAAAGGATGTGGGTTTGTATCTAGAAGAGATTCTCCTA CAGAGTCTAATAAATATTGTAGGAATTCTAACTTATAAGGACAAGTTAGGTGTAATGGTG AGAGTTATCTTACCGAGCCACCAGATCCTAGGTTTGAAGTAGCCTCTTCCTATTTTCATT GGGTCATGAATTTGTAGTATCTGTATTTGCAGCGGAAAGCTTACCTTGTTTTATGCCTTT GTCGTGTGAGTCTTCGGTAGTGAGTCTACCCTTTAGGGTTTGTTCGATTATTTCCATTCC ATATGGATTGGAGGGGATTGATATGGATTGTGAGAGATTTTGACTTATTAGGGATTGAAA CTCCCCTCAATCATCCTCAATCCATATGGATTGGGGTTGAAACGAACAAGTCCTTAATGT AGATCGGTCCATATGGTTAATTTCTCTTTTTATTTTATCTGATCCATATGCCTTTTCTTG TG