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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028167_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:25047706:25050015:-1 gene:Zm00001d028167 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 and DOMON domain-containing protein

Sequence

ATGTCGCGGCTCCTCCTCCTCGGGGCCGCCGTGCTGCTGCTCGCGTCGGCCGCCACGGCG
CAGGACTGCCTGTCCGCGACGTTCAGCGGCGGGCGGACCTTCGGGCGGTGCAACAACCTG
CCGTCGCTGAGCGCCAGCCTGCACTGGACGTACCACCCGGAGAACGGCACCGCGGACGTG
GCGTTCCGCGCGCCGTCGGACGCCAGCGGCTGGGTCGCCTGGGGCATCAACCCCGACCGC
GGCGGCAGCATGGGCGGCAGCAGCGTCTTCGTGGCCTCGCCCTCGCAGGACGGCAGCGGC
GCGGTGTCCATCCTCATGACCCACCTGGAGAGCACGTCGCCCAGCCTAACCAACAACACG
CTCAAGTTCAAGGTGCCCGTCGGCCCCGCCGCCGAGTACTCCAACGGCGCCTACACCATA
TTCGCCACGGTGGAGCTTCCCGGCAACTCCACGCAGCAGTTCACGGTGTGGCAGGCCGGC
GCGACCAGCAACGGTGCCATCTCCCCTCACCCGACGGCGCCGGCCAACTTGGCCAGCACC
CAGAGGCTGGACTTCCTCTCCGGGTCCAGCACCGCCGCCTCAAACTCCAGGCTTCACCGC
CGTAACATCCACGGCATGCTGAACGCGATCGCCTGGGGCGTCCTGATCCCCGTCGGCGCC
ATCATCGCGCGGTACCTGCGCGTGTTCGAGTCCGCGGACCCGGCGTGGTTCTACCTGCAC
ATCGCGTGCCAGTGCTCCGGCTACATCCTGGGCGTGGCCGGCTGGGGCCTGGGGCTGAAG
CTCGGCAGCGAGTCGGCCGGCGTCACCTACCAGCCGCACCGCAGCATCGGCATCGCCATC
TTCTGCCTGGCCACGCTGCAGGTGTTCGCGCTGCTGCTCCGGCCCGACAAGAAGAACAGG
TACAGGCTGTACTGGAACATCTACCACCACTCCGTCGGCTACTCCGTCATCGTCCTCGGT
GCCGTCAACATCTTCAAGGGGCTCGACATCCTCAAGCCGGACAGCGGCTACAAGACCGCC
TACATTGTCGTCCTGGCCACGCTCGGCGGCGTCGCGCTCTGCCTCGAGGCCATCACGTGG
CCCATCGCCATCCGGAAGCGCAGGCGTAACGCCGCCGACAAGGCGTCCAACGGCAACGGC
TGGCAGCAGGGTGCGTAG

Peptide Sequence

PEP ID

Zm00001d028167_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:25047706:25050015:-1 gene:Zm00001d028167 transcript:Zm00001d028167_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 and DOMON domain-containing protein

Sequence

MSRLLLLGAAVLLLASAATAQDCLSATFSGGRTFGRCNNLPSLSASLHWTYHPENGTADV
AFRAPSDASGWVAWGINPDRGGSMGGSSVFVASPSQDGSGAVSILMTHLESTSPSLTNNT
LKFKVPVGPAAEYSNGAYTIFATVELPGNSTQQFTVWQAGATSNGAISPHPTAPANLAST
QRLDFLSGSSTAASNSRLHRRNIHGMLNAIAWGVLIPVGAIIARYLRVFESADPAWFYLH
IACQCSGYILGVAGWGLGLKLGSESAGVTYQPHRSIGIAIFCLATLQVFALLLRPDKKNR
YRLYWNIYHHSVGYSVIVLGAVNIFKGLDILKPDSGYKTAYIVVLATLGGVALCLEAITW
PIAIRKRRRNAADKASNGNGWQQGA

Transcript Sequence

Transcript ID

Zm00001d028167_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:25047706:25050015:-1 gene:Zm00001d028167 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 and DOMON domain-containing protein

Sequence

AAGCAAACCTTCATCTATCGAGTCGCCCGTCACCACAGCTGATATTGAGGCGACGCGCCG
GCCGTCCAGATCAACCAAAAAAGAAAAAAAGAAAAAACAGTAGCCATGTCGCGGCTCCTC
CTCCTCGGGGCCGCCGTGCTGCTGCTCGCGTCGGCCGCCACGGCGCAGGACTGCCTGTCC
GCGACGTTCAGCGGCGGGCGGACCTTCGGGCGGTGCAACAACCTGCCGTCGCTGAGCGCC
AGCCTGCACTGGACGTACCACCCGGAGAACGGCACCGCGGACGTGGCGTTCCGCGCGCCG
TCGGACGCCAGCGGCTGGGTCGCCTGGGGCATCAACCCCGACCGCGGCGGCAGCATGGGC
GGCAGCAGCGTCTTCGTGGCCTCGCCCTCGCAGGACGGCAGCGGCGCGGTGTCCATCCTC
ATGACCCACCTGGAGAGCACGTCGCCCAGCCTAACCAACAACACGCTCAAGTTCAAGGTG
CCCGTCGGCCCCGCCGCCGAGTACTCCAACGGCGCCTACACCATATTCGCCACGGTGGAG
CTTCCCGGCAACTCCACGCAGCAGTTCACGGTGTGGCAGGCCGGCGCGACCAGCAACGGT
GCCATCTCCCCTCACCCGACGGCGCCGGCCAACTTGGCCAGCACCCAGAGGCTGGACTTC
CTCTCCGGGTCCAGCACCGCCGCCTCAAACTCCAGGCTTCACCGCCGTAACATCCACGGC
ATGCTGAACGCGATCGCCTGGGGCGTCCTGATCCCCGTCGGCGCCATCATCGCGCGGTAC
CTGCGCGTGTTCGAGTCCGCGGACCCGGCGTGGTTCTACCTGCACATCGCGTGCCAGTGC
TCCGGCTACATCCTGGGCGTGGCCGGCTGGGGCCTGGGGCTGAAGCTCGGCAGCGAGTCG
GCCGGCGTCACCTACCAGCCGCACCGCAGCATCGGCATCGCCATCTTCTGCCTGGCCACG
CTGCAGGTGTTCGCGCTGCTGCTCCGGCCCGACAAGAAGAACAGGTACAGGCTGTACTGG
AACATCTACCACCACTCCGTCGGCTACTCCGTCATCGTCCTCGGTGCCGTCAACATCTTC
AAGGGGCTCGACATCCTCAAGCCGGACAGCGGCTACAAGACCGCCTACATTGTCGTCCTG
GCCACGCTCGGCGGCGTCGCGCTCTGCCTCGAGGCCATCACGTGGCCCATCGCCATCCGG
AAGCGCAGGCGTAACGCCGCCGACAAGGCGTCCAACGGCAACGGCTGGCAGCAGGGTGCG
TAGGGGGCCAGGTCGATCGCCGGGCTTTGTGCGCGTGTGTCGTTGTGCTATAGTTTTGAT
GCGAGAGAGAGGTCTGATATCGATGTGCTGATGCCGTTGTTCAGAGAGAGAGATCGTTGC
TGATGTGTTTCTTTCCTGTTACTACTGCCTCTGTAGTCTGTACTCCTACCTAGAAGAGTA
GCTCCTTTGATTTTTTTTCTTCTGTTTTGTTGTTGAATTTTATTAGGGTTCTATAGTGCC
ATTTGTACACATTTTTTCCCTTCTTATTGATGTACGTACGACTGCTTTGATTATTGTATG
GTTTCAGTCAGATGACACGGCTTTCCTTACTGCTCAAGTTAAAAACTGACAGATTGTCGT
TGAG