Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028102_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:23004570:23008536:1 gene:Zm00001d028102 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer mitochondrial membrane protein porin

Sequence

ATGTGTTCTTTGTACCAGGTGGAGCTGCAATACTTCCATGAGAATGCAACTTTTGCCACT
GTTGTTGGCACGAAGCCTTCTCCAGTGATTGATCTTTCTGGGACAGTAGGTGCTCAAGGA
GTTGCATTTGGTGCAGAAGCTGGGTATGACACTGCTACGGGAAAATTTACCAAGTACACT
GCTGCAATTGGTGTAACCAAGCCAGACTACCATGCTGCATTCATTCTGGCGGACAAAGGT
GACACCATTAAAGTGTCAGGTGTTTATCACCTGGATGAGAAACAGAAGGCCTCAGCTGTG
GCTGAGCTAACCCGGAGGCTTTCAACAAATCAGAACACACTCACAGTTGGTGGACTGTAC
ACAGTTGATTCTCAGACAGCCGTGAAGGCAAGGCTCAACAACAATGGAACGCTTGCCGCG
CTTCTTCAGCACGAGCTTAAACCCAAGTCACTCTTGACGATCTCTGGTGAATTCGACACC
AAGGCTCTGGACAGACCCCCCAAGTTTGGCTTGGCGCTTGCGCTGAAGCCCTGA

Peptide Sequence

PEP ID

Zm00001d028102_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:23004570:23008536:1 gene:Zm00001d028102 transcript:Zm00001d028102_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer mitochondrial membrane protein porin

Sequence

MCSLYQVELQYFHENATFATVVGTKPSPVIDLSGTVGAQGVAFGAEAGYDTATGKFTKYT
AAIGVTKPDYHAAFILADKGDTIKVSGVYHLDEKQKASAVAELTRRLSTNQNTLTVGGLY
TVDSQTAVKARLNNNGTLAALLQHELKPKSLLTISGEFDTKALDRPPKFGLALALKP

Transcript Sequence

Transcript ID

Zm00001d028102_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:23004570:23008536:1 gene:Zm00001d028102 gene_biotype:protein_coding transcript_biotype:protein_coding description:Outer mitochondrial membrane protein porin

Sequence

AGGCACACAGCTCCTCTTGGCGGCGCCTCTGACTTCTCCTTTTTCGTCGCCCTTCTCCTT
TTTCGTCGCCTTCGATCGGCGGCCGCCTCCTTCCTCCACTTCCGTCCCTTCACCGAGCCG
CCGCCGCCACTATGAAGGGACCCGGCCTCTTCTCCGACATCGGCAAGAAGGCCAAGGGTA
CTTCCTGGTCTCCTCGCTATCGTCGTCATCTCTCTCTAACTAGCTCGGATTTCCCGGTTT
GTGGTTTGTGATCTGCAGATCTACTCAGTAAGGACTACACTTACGACCAGAAGCTGACCA
TCTCCACCGCCAGCGCCTCTGGACTGGTAAGATCCGACCGCGCTCGTGTGATTCCATTTC
CATGCTGCCTGGTTCCTGTTCGCTTGTCCGTGCTCGTGACGCCTGATCTGGTAGTTGTGG
CTGTGTTCAGCGTCGGGATGTCGCCGTGCGGTACGCAGGCTGGTCGCTAAGTGTGTCTCG
TTAGGTGTTTGTTACGTTGCTAATTTTGAATCTGCCCTACCAATTTGTCTACGATTTATG
TGGTAGTTGTATCTGTAGTTCTGCGTGTTGGTATTTGAGGGTACAAAGTGTCTGGTGCTT
GTTAACTGTGACTGAACGATGGAAAATTATAATTTGGTCATTTCCTTGTAGATAGTTGCT
TGTTGAGTACTTGAGCACGATCATTAAGTACTGCCGACACTAGCAGGTGTATTTTAGATT
CTGTGTTTGACCTTTGTTTCCGCTGGTACATTGGTGGTCAGGATCTGAGCTTATACTGAT
TTGTGAAGTTGCTAAGGTTTATGTGCCTGAAGAAATGAGTTGGTTCTTGACTTGCTTGTT
TTAAATTCTTCTGTTGTTCATGCCTTGTTTCTTCATTGCACCATCATATTACTCTTTCTG
CAGTTCTGCCTACCATTCTGATTACATAAGTACTGAATAAGTGTAGCTGCTTGTATTCTA
TTGAAGCAATTAACGTCATTGTTGGAATTGGTTTCGGTAGAGTTGCACTTTTAGTTGCTT
GTGTTCTTTAGAAAATTCTATCTGTTTTAGTACAACCTATCACGATTTCTCCTGTTGCTG
CCTTATGTTTTCACTGTGTTGGCATATGTACATGACATGCTCTGTTATACATTTCTGTTG
TCATAAATATTTGGTAGTTCCACTTGCCAAATTTCTCGTATCTGTCAGTATCTTACCAAC
ACAAACACATCTCTGGTGTCACCATGTTAGTGTTTTGAGCGTTGATACCTGATACTTGCC
AGTTAGTGTATCCAATGATGGGATGTGCAGTTACATTTTCTTCCTGCTTCAAACCTGATT
TGTGATTTCATCGGTTAATGTGTGCAGTTCATTTGGTGTACTAAGTTTTTTTATTTCACA
AAATGTATCCATGATCATATTCTTAAAATTAGCTTAAGTTATATTTGGCAAATTGCTGAA
TCAGGCGCCCAAAAATAGGTTGGATTCTGGCACCCATATTGGATATGCCTGGACCAATTT
GCCTTTATGCTTAATGATCAGTCTTACTATAGCAACTACCATTCGCTGACTGAATTGAAC
TATCATAAAAGCTGTCTTTACTTGAGCATGATATATTAACTATATTAAAGTGCAACTTGG
TGATTCAGTAATGTATTACTGAACTGAACTATCACAAAATCTGTCTTGACTTGAGCATGA
TATATTAACTATATTAAAGTGCAACTTGGTGATTCAGTAATGTATTACTGAATCAAATTG
TCAATTGGTCATGAGGAGATAGACATACAATCAATTAATTTACTCATCTTAAATTTGAAA
AACTAAAAAAATTCGACCTGCAGGGGTAAGACTGCCCCCACGACATTATATTAAGAAGAT
CTCACGTAGGTTGAGAAAACCACCGAACCCCTGCCCCATCCATACACATCGACACCGTAG
CCCATGTGAGTACGACCTTGACCGGGCCAGGTCTTAGACCTGTGCTTTGGCGTTGGGCAA
ACGAGGGGATTTTTTTTTAACCACAACCTAAAAATTCGCTCCCATGGAGAGTCGAACCCA
GGACCTGAGGAGTGCTACTCAGACCACCTAACCAACTCGGCTAGAGGTCCTTTTGTAAAT
TTGAAAAACTAAGACTAGACGTACATGCAACTGTATGGATAATAATTGCTCACCGCCCTG
TAAGCCGTTGAAACCACATCGATAATGTTATTTTGAGTATTCACTTTTTTTAATGTATGG
GTTATGATCTTGTGTACTCTGTTTGCTGTGATATGGCATCATTTTGCTTCTTTCAGCAAC
AGTAAACCGATATATTTATATATCCTTTTCATTGTATGCTTCTACAGCACTATTTTGAAA
CATGTTAAACGGGTATATTTGCATATCCTTTTCATTTTATGTTTCTACAGCACTATTTTG
AAACATGTTTATCAAAATACCGTCCAAAGTTAGTTAAAAAAGTTCTGTTGTTAACTGCTA
TATGGCAATACTAGTATACTTTCTGTTGTTTGAACTTATTTTCTTTATATATGAATTGTG
TCTTTATGAACATGCTTCTCATGGCTATCCGTTTTTAGGGCCTGACTTCCACAGCTGTGA
AGAAAGGAGGGCTTTATTCTCTTGATGTCAGTTCAGTTTACAAGTACAAGAATACCACTG
TTGATGTTAAAGTGGACACTGAATCAAATATCTCTACTACATTGACCGTGTTGGACGCCT
TGCCATGCACAAAGCTTGTCACTTCTGTGAAGCTGCCTGACTACAATTATGGAAAGGTAT
TATTTCCATTAGGACCTGTTTGGTTTCCAGGAATTGAGAGGAACTGTAATTTAATCTAAT
GATAAAAAGGAAAGCACTTTCTAGATATTGGTTTCAATTGATGGGATCCAAACATGCTCT
TAATTCCAAGTTTTGGTTATTGAATTAGAACAGGCCCTTTAGTGTATGTGTTCTTTGTAC
CAGGTGGAGCTGCAATACTTCCATGAGAATGCAACTTTTGCCACTGTTGTTGGCACGAAG
CCTTCTCCAGTGATTGATCTTTCTGGGACAGTAGGTGCTCAAGGAGTTGCATTTGGTGCA
GAAGCTGGGTATGACACTGCTACGGGAAAATTTACCAAGTACACTGCTGCAATTGGTGTA
ACCAAGCCAGACTACCATGCTGCATTCATTCTGGCGGACAAAGGTGACACCATTAAAGTG
TCAGGTGTTTATCACCTGGATGAGAAACAGAAGGCCTCAGCTGTGGCTGAGCTAACCCGG
AGGCTTTCAACAAATCAGAACACACTCACAGTTGGTGGACTGTACACAGTTGATTCTCAG
ACAGCCGTGAAGGCAAGGCTCAACAACAATGGAACGCTTGCCGCGCTTCTTCAGCACGAG
CTTAAACCCAAGTCACTCTTGACGATCTCTGGTGAATTCGACACCAAGGCTCTGGACAGA
CCCCCCAAGTTTGGCTTGGCGCTTGCGCTGAAGCCCTGATCAGATCACCCCGCAGCGATT
GTTGGTGAATTTTGAATTCTTTGGTTGTTTTTCGCAAAGCTGTAGCCAATAATCCGTTCC
ACGAACCTTTTCTGTTATTCTGGCAAACGTTTGGAGCACTGTGGCTTAGATCCGGATGGG
TCGTCTACAGGAATTTTACCTGCCTGCTTTTATTGTTGGAAGCATCTGGCCGTCGGTAGA
TGTACACTGTGCTCGCTTCTTTAGCACCTAGGCCTCTGCCACTGTGTTACTGAGTAGACG
CTACGGTAATCTTTTGCATGCAGGATTAGCATGCTAATTTTGTGCGGTGTTTGATTTACC
GCTCTTTACGGT