Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028093_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:22735361:22740921:-1 gene:Zm00001d028093 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 2 plasma membrane-type
Sequence	ATGGAGAGCTATCTCAAGGAGAACTTCGGGGGCGTGCAGGCCAAGCACTCGTCGGACGAG GCGCTGAGACGATGGCGCAAGGTCGTCGGCCTCGTCAAGAACCCCAAGCGCCGCTTCCGC TTCACGGCCAACCTCGACAAGCGCAACGAGGCCACCGCCATGAAGCGAAATAACCATGAG AAGCTACGTGTTGCCGTGCTTGTTTCAAAGGCTGCACTTCAGTTCATTCACAGCGTTGCT CCGTCGAGTGAGTACAAGGTCCCTGCCGATGTCAAGGCGGCTGGTTTCGGCATCTGCGCT GAAGAGCTGAGCTCGATTGTCGAGGGGCATGATGTGAAGAAGCTGAAATCTCATGGTGGC GTGCAGGGCCTCGCGTCCAAGCTATCCACTTCGGAGTCTGACGGCCTCACCACGTCCGCG GACAAGCTAGCGACCCGGCGGGATGTTTTTGGCGTCAACAAGTTTGCGGAGGCGGAGTCC CGTGGCTTCTTGGTCTTCGTCTGGGAGGCGTTGCAGGACATGACACTCATGATCCTTGCC GCGTGCGCGTTCTTCTCGCTCATCGTCGGTATCGCCACGGAGGGATGGCCCAAGGGCGCA CACGACGGCCTCGGCATTGTGGCCAGCATCCTGCTGGTCGTGTTCGTCACGGCGTCAAGC GACTACCGCCAATCCCTGCAGTTCAAGGACCTTGACAAGGAGAAGAAGAAGATCACGGTT CAGGTCACCCGGAGCGGCTACAGGCAGAAGCTCTCAATATATGAACTTCTCGTCGGCGAC ATCGTTCACCTCTCCATTGGTGATCAGGTGCCGGCTGACGGGCTGTTCATGTCAGGCTTC TCGCTTCTGATCAACGAGTCGAGCTTGACCGGAGAGAGTGAGCCAGTTGCCGTCAACGTT GAGTACCCATTCCTTTTGTCAGGGACGAAGGTGCAGGACGGTTCTTGCAAAATGCTCGTC ACGACAGTCGGCATGAGGACTCAGTGGGGGAAGCTGATGGCCACTCTCAGCGAAGGTGGT GATGACGAGACACCATTGCAGGTCAAGCTGAATGGTGTGGCCACCATCATCGGTAAGATA GGACTTATCTTTGCAGTGGTCACATTCGCAGTGCTCACCCAAAGCCTGTTCCGGCGCAAG ATCATTGATGGTACGTACTTGAGCTGGACTGGAGATGACGCATTGGAGCTGCTTGAGTTC TTCGCCATTGCTGTCACCATCGTCGTTGTGGCAGTACCTGAAGGGCTACCGCTGGCCGTG ACACTGAGCCTTGCATTTGCAATGAAGAAGATGATGAACGACAAGGCACTCGTCCGGCAC CTTGCAGCCTGCGAGACCATGGGCTCAGCGACCTCCATTTGCAGTGACAAGACAGGCACT CTCACAACGAACCACATGACCGTTGTCAAAGCCTGCATCTGTGGTAAGATCAAAGAAGTG GATGGTGTTTCGGATATCAAGAACCTGTTCTCTGAACTCCCAGACTCTGTCATGGCGATT CTCTCCCAGTCCATATTCAACAACACTGGGGGAGACGTTGTCTTGAACCAGGATGGCAAA CGTGAAATACTGGGGACACCTACTGAGACAGCGATTCTAGAGTTCGGGCTGTCACTTGGT GGAGACTTTTTGGCGGTGCGCAAAGCAAGCACTCTTGTAAAGGTGGAGCCGTTCAACTCT GCCAAGAAGAGAATGGGAGTGGTAATCCAGCTCCCAGAGGGTGCACTGCGAGCACACTGC AAAGGTGCATCAGAGATCATACTGGCATCTTGCAGCAAGTACCTGAATGAAGATGGCAAT GTCATCCCCCTGGATGCAGGAACCATTGATCACTTGAAGGCCACGATCGATAGCTTCGCG AACGAGGCACTTCGCACTCTCTGTCTTGCCTACATAGAAGTTGAGGATGGGTTCTCAGTC AATGATCAGATCCCAACGGATGGGTACACCTGCATTGGCATTGTGGGGATCAAAGACCCA GTGCGGCCTGGAGTGAAGGAATCAGTTGCTATCTGCAGGTCGGCAGGTATTACAGTCAGG ATGGTCACAGGTGACAACATCAACACGGCAAAGGCAATTGCCCGGGAATGCGGCATTTTA ACTGAAGGTGGCATTGCCATAGAAGGCCCAGATTTCAGAACCAAGAGTGAAGAAGAGCTT ACTCAACTGATACCAAAGATACAGGTGATGGCAAGATCTTCACCACTGGATAAGCATACC CTTGTCAAGCATCTTCGAACTAAACTCTACGAAGTTGTGGCTGTGACTGGTGACGGAACA AACGATGCACCTGCTCTTCATGAGGCTGATATTGGGCTTGCAATGGGCATTGCTGGAACC GAGGTAATTTCGAGATTTTCCTTATGTTTCTAA

Peptide Sequence

PEP ID	Zm00001d028093_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:22735361:22740921:-1 gene:Zm00001d028093 transcript:Zm00001d028093_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 2 plasma membrane-type
Sequence	MESYLKENFGGVQAKHSSDEALRRWRKVVGLVKNPKRRFRFTANLDKRNEATAMKRNNHE KLRVAVLVSKAALQFIHSVAPSSEYKVPADVKAAGFGICAEELSSIVEGHDVKKLKSHGG VQGLASKLSTSESDGLTTSADKLATRRDVFGVNKFAEAESRGFLVFVWEALQDMTLMILA ACAFFSLIVGIATEGWPKGAHDGLGIVASILLVVFVTASSDYRQSLQFKDLDKEKKKITV QVTRSGYRQKLSIYELLVGDIVHLSIGDQVPADGLFMSGFSLLINESSLTGESEPVAVNV EYPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI GLIFAVVTFAVLTQSLFRRKIIDGTYLSWTGDDALELLEFFAIAVTIVVVAVPEGLPLAV TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKACICGKIKEV DGVSDIKNLFSELPDSVMAILSQSIFNNTGGDVVLNQDGKREILGTPTETAILEFGLSLG GDFLAVRKASTLVKVEPFNSAKKRMGVVIQLPEGALRAHCKGASEIILASCSKYLNEDGN VIPLDAGTIDHLKATIDSFANEALRTLCLAYIEVEDGFSVNDQIPTDGYTCIGIVGIKDP VRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTEGGIAIEGPDFRTKSEEEL TQLIPKIQVMARSSPLDKHTLVKHLRTKLYEVVAVTGDGTNDAPALHEADIGLAMGIAGT EVISRFSLCF

Transcript Sequence

Transcript ID	Zm00001d028093_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:22735361:22740921:-1 gene:Zm00001d028093 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 2 plasma membrane-type
Sequence	GGGAGAGCGAATTCGAGCTGGTCGAATCCGGCAGCCGAGCGAGATGGAGAGCTATCTCAA GGAGAACTTCGGGGGCGTGCAGGCCAAGCACTCGTCGGACGAGGCGCTGAGACGATGGCG CAAGGTCGTCGGCCTCGTCAAGAACCCCAAGCGCCGCTTCCGCTTCACGGCCAACCTCGA CAAGCGCAACGAGGCCACCGCCATGAAGCGAAATAACCATGAGAAGCTACGTGTTGCCGT GCTTGTTTCAAAGGCTGCACTTCAGTTCATTCACAGCGTTGCTCCGTCGAGTGAGTACAA GGTCCCTGCCGATGTCAAGGCGGCTGGTTTCGGCATCTGCGCTGAAGAGCTGAGCTCGAT TGTCGAGGGGCATGATGTGAAGAAGCTGAAATCTCATGGTGGCGTGCAGGGCCTCGCGTC CAAGCTATCCACTTCGGAGTCTGACGGCCTCACCACGTCCGCGGACAAGCTAGCGACCCG GCGGGATGTTTTTGGCGTCAACAAGTTTGCGGAGGCGGAGTCCCGTGGCTTCTTGGTCTT CGTCTGGGAGGCGTTGCAGGACATGACACTCATGATCCTTGCCGCGTGCGCGTTCTTCTC GCTCATCGTCGGTATCGCCACGGAGGGATGGCCCAAGGGCGCACACGACGGCCTCGGCAT TGTGGCCAGCATCCTGCTGGTCGTGTTCGTCACGGCGTCAAGCGACTACCGCCAATCCCT GCAGTTCAAGGACCTTGACAAGGAGAAGAAGAAGATCACGGTTCAGGTCACCCGGAGCGG CTACAGGCAGAAGCTCTCAATATATGAACTTCTCGTCGGCGACATCGTTCACCTCTCCAT TGGTGATCAGGTGCCGGCTGACGGGCTGTTCATGTCAGGCTTCTCGCTTCTGATCAACGA GTCGAGCTTGACCGGAGAGAGTGAGCCAGTTGCCGTCAACGTTGAGTACCCATTCCTTTT GTCAGGGACGAAGGTGCAGGACGGTTCTTGCAAAATGCTCGTCACGACAGTCGGCATGAG GACTCAGTGGGGGAAGCTGATGGCCACTCTCAGCGAAGGTGGTGATGACGAGACACCATT GCAGGTCAAGCTGAATGGTGTGGCCACCATCATCGGTAAGATAGGACTTATCTTTGCAGT GGTCACATTCGCAGTGCTCACCCAAAGCCTGTTCCGGCGCAAGATCATTGATGGTACGTA CTTGAGCTGGACTGGAGATGACGCATTGGAGCTGCTTGAGTTCTTCGCCATTGCTGTCAC CATCGTCGTTGTGGCAGTACCTGAAGGGCTACCGCTGGCCGTGACACTGAGCCTTGCATT TGCAATGAAGAAGATGATGAACGACAAGGCACTCGTCCGGCACCTTGCAGCCTGCGAGAC CATGGGCTCAGCGACCTCCATTTGCAGTGACAAGACAGGCACTCTCACAACGAACCACAT GACCGTTGTCAAAGCCTGCATCTGTGGTAAGATCAAAGAAGTGGATGGTGTTTCGGATAT CAAGAACCTGTTCTCTGAACTCCCAGACTCTGTCATGGCGATTCTCTCCCAGTCCATATT CAACAACACTGGGGGAGACGTTGTCTTGAACCAGGATGGCAAACGTGAAATACTGGGGAC ACCTACTGAGACAGCGATTCTAGAGTTCGGGCTGTCACTTGGTGGAGACTTTTTGGCGGT GCGCAAAGCAAGCACTCTTGTAAAGGTGGAGCCGTTCAACTCTGCCAAGAAGAGAATGGG AGTGGTAATCCAGCTCCCAGAGGGTGCACTGCGAGCACACTGCAAAGGTGCATCAGAGAT CATACTGGCATCTTGCAGCAAGTACCTGAATGAAGATGGCAATGTCATCCCCCTGGATGC AGGAACCATTGATCACTTGAAGGCCACGATCGATAGCTTCGCGAACGAGGCACTTCGCAC TCTCTGTCTTGCCTACATAGAAGTTGAGGATGGGTTCTCAGTCAATGATCAGATCCCAAC GGATGGGTACACCTGCATTGGCATTGTGGGGATCAAAGACCCAGTGCGGCCTGGAGTGAA GGAATCAGTTGCTATCTGCAGGTCGGCAGGTATTACAGTCAGGATGGTCACAGGTGACAA CATCAACACGGCAAAGGCAATTGCCCGGGAATGCGGCATTTTAACTGAAGGTGGCATTGC CATAGAAGGCCCAGATTTCAGAACCAAGAGTGAAGAAGAGCTTACTCAACTGATACCAAA GATACAGGTGATGGCAAGATCTTCACCACTGGATAAGCATACCCTTGTCAAGCATCTTCG AACTAAACTCTACGAAGTTGTGGCTGTGACTGGTGACGGAACAAACGATGCACCTGCTCT TCATGAGGCTGATATTGGGCTTGCAATGGGCATTGCTGGAACCGAGGTAATTTCGAGATT TTCCTTATGTTTCTAAAAATAACTAGCCATGTCATTCCAATTATCACACTACTGCTGATA TCTTGTAGTAATCACCGATATCAAACATCTTGGAAATTTATTTTTTAGCTATATTTAGTA TTGTGATTTTTGCTCTTTCACTCTTTTATATGGCTGTAACATCTATGAGATCTAGATACC CATGACCATGAGTAACAATCAATTACATGATATCTCGAGTTATTTGCTATTTACTCCCAT TTTGAATTTGACTCTTTAACATGTTCTTAAAGGTGGCCAAAGAGAGTGCTGACGTCATCA TTCTTGATGACAACTTCTCCACAATTGTCACTGTTGCAAAATGGGGTCGATCAGTTTACA TCAACATTCAGAAGTTTGTGCAGTTTCAGCTCACTGTCAATGTGGTTGCTCTGGTGGTAA ACTTCTCCTCAGCTTGCCTGACAGGGAGTGCTCCTCTCACTGCTGTGCAATTGCTCTGGG TCAACATGATCATGGATACACTGGGTGCGCTGGCATTGGCGACAGAACCCCCAAACAATG AACTGATGAAGAGAACACCTGTTGGAAGGAAAGGAAACTTCATCAGTAACATTATGTGGA GAAACATCCTGGGACAGGCCTTGTACCAGTTCCTTGTAATTTGGTACCTACAGACAGAGG GAAAGTGGCTGTTTGGAATCAAGGGCGATAACTCCGATCTAGTCTTGAACACACTGATCT TCAATTGCTTCGTGTTCTGCCAGGTATTCAATGAGGTGAGCTCAAGGGAGATGGAGAGGA TAAATGTATTTGAAGGCATTCTAAACAACAACGTGTTCATTGCTGTCCTCGGCAGCACCG TCATCTTCCAGTTCATCATAATACAGTTCCTCGGCGATTTCGCAAACACTACCCCTCTTA CGCTCAACCAGTGGATCGCATGTGTTTTTATCGGTTTCATAGGCATGCCTATCGCAGCTA TTGTGAAGATGATCCCAGTTGGATCTACGTAGTGAATTAGAGCTAATTTCGTCCAGAAAC TGAAGTTGGACATGGCTACAGTCTGATCATGGCAATGGAGTTTTCTGGGTTGCCATTTGT GTACAAGATAGATCTGTGCTATGCTTCTATTCTGGTCAATCTTTGCATCTTTTATCCTGT AGTATCTTATCAGCCAAGGTTGTGGACTCGATTGTTAGAAAATGCCTTGGGCTCTTGTAG CTGTTCTTTGCTTTATATTTTTTCTTGGTGCTTTTGCTAGGAACATTGGAGGCTGGAGCT GTATATGACAATCTTGTTGTTCACTCGAATGTGCTTGTTTTGACACCT