Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028046_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:21513845:21553331:-1 gene:Zm00001d028046 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGCCGCCGAAACCCGCGCCCCGGCTCTTCCAGTACATCTCCAACAAGTCGCGCAAACCG CCGCCGCCACCAGCCGCCAGATCCGCTGCGCCCGGCAGCCACGACGGCACCGCGTCCGAT GCCGACGTCGGTGAGGTGTACCGCATCGTCACGTCCGCGGCCACGCCGTCCGCGATGGAG TCCGCGCTCGCGGCGTCCGCCGTCTCGCTCTCGTCCCCGCTCCTCGACGCCGTCATGCGC CGCTTCCGCTTCGCGCACGGGGACCCGCTCCGCGCGCTATCGCTCCTCTCCCTCGCCGCC GACCGTGGCGGCATCGCGCCGTCGCCTTACGCCATCGACACCGCGCTCTACGTGCTCGGC CGGGCCCGCCGCTTCCCGCACATGTGGAACCTCGTCGCGAACACGCGCCGCATATGTCCG GACGCCCTCACCCCGCGCACCGCCATGATCGTCCTCGGCCGCGTCGCCAAGGTCTGCTCC GTCCGTGAGACAGTCGCCTCCTTCCGCTGCCTCGCGCGACTTTTCCACACCGTCGACCCG GCCGTACTCTTCAACGCGCTGCTCCGCACGCTCTGCCAGGAGAAGAGCATGTCCGACGCG CGCAACGTCTTCCACGCGCTCAAGTACGAGTTCCGAGTGAACCGCCACACCTTCAACATC CTCCTCTCTGGCTGGAAGTCGGCCGAGGACGCCGAGGCGTTCGTCACCGAAATGCGGGAG CTCGGGGTGGAGCCTGACCTGGTGACCTACAACAGCTTGATCGACTGCCACTGCAAGAAC CGGGACGTGCAGAAGGCCTACAAGCTGCTCGACGAAATGCGGCACAAAGACATTTCCCCT GATATTATCACTTACACAAGCTTGATTGGCGGACTGGGGTTGATTGGCCAACCCGACAAG GCAAAAGATTTGCTCAAGGAGATGTATGAGCTAGGGTGCTACCCAGATGTCCCTGCATAC AATGCAGCAATAAGGAATTTTGTTATAGCGAAGAGGCTTGGAGATGCATTCGCACTGATG GATCAAATGGTCTCAAAGGGACTGATGCCAAATCCCACAACTTATAACCTTTTCTTCAGG TGCTATTACTGGGCTTTCGACATTGGCAGCGCATGGCGGTTATATGAGCGTATGCGGTCT GAAGGATGTTACCCAAACACACAGTCTTGCATGTTCATTATCAGGTTGTGCCACCGGTAT GGGAAGGTGGCACTGGCACTTGAGCTATGGAGCGATATGGTCAGCAGCAGCTTTGGATCA TTAACGCTGGTATCAGATGTGCTGTTGGACCTGCTGTGTGACGAGGGGAAGTTGGAGGAC GCTGAGAGGTGCTTCTGTCAGATGGTTGAGTTAGGGCAAAAGCCCAGTAATGTTGCATTT AGAAGGATAAAGATACTTATGCAGCTTGCCAAACAGGAAGAATCAATTGCCAGATTAACT GAAAAGATGATACAATTTGGTCGACTGCCACCAGTGGATTGCCAAAGAGTCCAACACTCT GTTGAAAGCAGGCCTAGTAATGTGATACATTTAGCTGTTGGTATCCAACAAGAAGCTATG CAGATGGAGCTATCTAATATTTTACAACAAAAGAATGGACGACCATTTCATCATTGTCTA TACGCTATATTACAACAAGAAAACCTTTTAGCCCTAAGCAAGTTGGGAGGGATCCCTCGC CCCTCATTTTATATCCTAGGAAGGGATGGAGATTACAAGAGTCCTGCTTGGGCAGCTCAG AGCTATGACGAGGTAGGCCCCAGCCACTTCACTGAGCAGTCTGCTAGTCGAGCCCTCGAG CCCCATGCAACCACTGTTAGTCCGAGTTCTCTTCCAAAGACTCGAAAGAGGAGAAGGGTG GTTTGA

Peptide Sequence

PEP ID	Zm00001d028046_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:21513845:21553331:-1 gene:Zm00001d028046 transcript:Zm00001d028046_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MPPKPAPRLFQYISNKSRKPPPPPAARSAAPGSHDGTASDADVGEVYRIVTSAATPSAME SALAASAVSLSSPLLDAVMRRFRFAHGDPLRALSLLSLAADRGGIAPSPYAIDTALYVLG RARRFPHMWNLVANTRRICPDALTPRTAMIVLGRVAKVCSVRETVASFRCLARLFHTVDP AVLFNALLRTLCQEKSMSDARNVFHALKYEFRVNRHTFNILLSGWKSAEDAEAFVTEMRE LGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDISPDIITYTSLIGGLGLIGQPDK AKDLLKEMYELGCYPDVPAYNAAIRNFVIAKRLGDAFALMDQMVSKGLMPNPTTYNLFFR CYYWAFDIGSAWRLYERMRSEGCYPNTQSCMFIIRLCHRYGKVALALELWSDMVSSSFGS LTLVSDVLLDLLCDEGKLEDAERCFCQMVELGQKPSNVAFRRIKILMQLAKQEESIARLT EKMIQFGRLPPVDCQRVQHSVESRPSNVIHLAVGIQQEAMQMELSNILQQKNGRPFHHCL YAILQQENLLALSKLGGIPRPSFYILGRDGDYKSPAWAAQSYDEVGPSHFTEQSASRALE PHATTVSPSSLPKTRKRRRVV

Transcript Sequence

Transcript ID	Zm00001d028046_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:21513845:21553331:-1 gene:Zm00001d028046 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGCCGCCGAAACCCGCGCCCCGGCTCTTCCAGTACATCTCCAACAAGTCGCGCAAACCG CCGCCGCCACCAGCCGCCAGATCCGCTGCGCCCGGCAGCCACGACGGCACCGCGTCCGAT GCCGACGTCGGTGAGGTGTACCGCATCGTCACGTCCGCGGCCACGCCGTCCGCGATGGAG TCCGCGCTCGCGGCGTCCGCCGTCTCGCTCTCGTCCCCGCTCCTCGACGCCGTCATGCGC CGCTTCCGCTTCGCGCACGGGGACCCGCTCCGCGCGCTATCGCTCCTCTCCCTCGCCGCC GACCGTGGCGGCATCGCGCCGTCGCCTTACGCCATCGACACCGCGCTCTACGTGCTCGGC CGGGCCCGCCGCTTCCCGCACATGTGGAACCTCGTCGCGAACACGCGCCGCATATGTCCG GACGCCCTCACCCCGCGCACCGCCATGATCGTCCTCGGCCGCGTCGCCAAGGTCTGCTCC GTCCGTGAGACAGTCGCCTCCTTCCGCTGCCTCGCGCGACTTTTCCACACCGTCGACCCG GCCGTACTCTTCAACGCGCTGCTCCGCACGCTCTGCCAGGAGAAGAGCATGTCCGACGCG CGCAACGTCTTCCACGCGCTCAAGTACGAGTTCCGAGTGAACCGCCACACCTTCAACATC CTCCTCTCTGGCTGGAAGTCGGCCGAGGACGCCGAGGCGTTCGTCACCGAAATGCGGGAG CTCGGGGTGGAGCCTGACCTGGTGACCTACAACAGCTTGATCGACTGCCACTGCAAGAAC CGGGACGTGCAGAAGGCCTACAAGCTGCTCGACGAAATGCGGCACAAAGACATTTCCCCT GATATTATCACTTACACAAGCTTGATTGGCGGACTGGGGTTGATTGGCCAACCCGACAAG GCAAAAGATTTGCTCAAGGAGATGTATGAGCTAGGGTGCTACCCAGATGTCCCTGCATAC AATGCAGCAATAAGGAATTTTGTTATAGCGAAGAGGCTTGGAGATGCATTCGCACTGATG GATCAAATGGTCTCAAAGGGACTGATGCCAAATCCCACAACTTATAACCTTTTCTTCAGG TGCTATTACTGGGCTTTCGACATTGGCAGCGCATGGCGGTTATATGAGCGTATGCGGTCT GAAGGATGTTACCCAAACACACAGTCTTGCATGTTCATTATCAGGTTGTGCCACCGGTAT GGGAAGGTGGCACTGGCACTTGAGCTATGGAGCGATATGGTCAGCAGCAGCTTTGGATCA TTAACGCTGGTATCAGATGTGCTGTTGGACCTGCTGTGTGACGAGGGGAAGTTGGAGGAC GCTGAGAGGTGCTTCTGTCAGATGGTTGAGTTAGGGCAAAAGCCCAGTAATGTTGCATTT AGAAGGATAAAGATACTTATGCAGCTTGCCAAACAGGAAGAATCAATTGCCAGATTAACT GAAAAGATGATACAATTTGGTCGACTGCCACCAGTGGATTGCCAAAGAGTCCAACACTCT GTTGAAAGCAGGCCTAGTAATGTGATACATTTAGCTGTTGGTATCCAACAAGAAGCTATG CAGATGGAGCTATCTAATATTTTACAACAAAAGAATGGACGACCATTTCATCATTGTCTA TACGCTATATTACAACAAGAAAACCTTTTAGCCCTAAGCAAGTTGGGAGGGATCCCTCGC CCCTCATTTTATATCCTAGGAAGGGATGGAGATTACAAGAGTCCTGCTTGGGCAGCTCAG AGCTATGACGAGGTAGGCCCCAGCCACTTCACTGAGCAGTCTGCTAGTCGAGCCCTCGAG CCCCATGCAACCACTGTTAGTCCGAGTTCTCTTCCAAAGACTCGAAAGAGGAGAAGGGTG GTTTGA