Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028020_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:1:20533334:20539413:1 gene:Zm00001d028020 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	ATGGAGCACGGTGGGCGAATGTCTCGTTCCCAGAGGAATGCTGCACTTCAGATACCTACC AGTTTTATATATCGCAGAAATGAGCAAGCACAACGGCGTGGCAGAGGTAGGGGGCGTAAT GCTCTCCATGACCGATTTGACAGTCATATCTCATCATCTGCACAAAACGGCCAAGCAACT GCCGATCGCCGTCTTGATAGTGTTTCAGGGTCATTTCAGTCATTAAGCATTGGATCTAGT TCTGGGGGAGCTGAAGTTGGCCAAGGCTCGAGGACTGGACAAGTGCTCGAACAGTTGTCC TTCCCACCTCTTTTAGACCCAGATATTCCTGACAACAACGTTGATTCTTTTCATGATGAA ACCTCATTTCCTTCATTATCCGAGCAGCAATCAAGGTATGCACTAGCTCTCAGTCAGAGT GCAAGGGGCACTGCGAGGCTTGGGGATGAGTCACTATTCCCCCCTTTGCCTGGGTCTAGT GGGTCTAATAACAATAGGGGTGCTGGTTCAGTCCAACAGGGACTACAAAGTCTAGCCAAG AGCACACTTGCAGCAAGACTTCAACAACGTAGCAAGGGCCCTGTGAAGGTACTTAATACT GCTCGGCCACGTCCCCCTGAAAATGTTGAAGCCCTCTCTAGTTCCACCCAGACATGGCCT ACACCTGATCAGGGCCTAGTCCTGTCTGGATATTCTCAGCTTCGATCTGGAACTCAACCA ACAAGGGAAAATGCCATGCCAACTATCTCCAGTAACACAGTGTGGAATCCTGTTGCTCCA AACAAGATGAAGCACTCTGTTTCTACGCCTAATCTTGTGTCTGGTGGATCCTCTGCCCAA GTATCATTGAGTACAGCTTATGGTAGCAACAAAAGTCAGGATCCTCCTCAAGGTAACCAA ACTTTGCCTGTTCCAGAGGATTTCCGTGCTGCAAACAAAACTCTGGTTGAAAGAATGCGT TCTGCTCTGGGAATGGACGAGGACAGGTACTCTGCATTCAAAGAGATTGCTGGTGAATAC CGTCAAGGTATCATAGGTACTCTGGAGTATCTTTCATATGTCGAGCAGTTTGGACTGTCA CACCTTGTTCCTGAAATGGCTAGGCTATTGCCTGATCCTCAAAAACAGAGGGAACTTGCT GATGCATATTATACAAATACTCGATTTAAAAGCCTACAAGAAAACGGAGGTGGAACTAGC TCACAAGAGGGCAACCGTAAAAAGAAGGGGAAGGGGAAAGCTCCTGTCACAGAAAGCAGT GCTGCTAATGATGTGAATAGTGCACTAGCAGATAACATTCTGGAGACTGTAAGAAGGCTT CAATCAAACCAGCAGGCTCGGGAAGGAGGAGCTGAGGTGCTGTCGAAGGATGGGTATCGA CCTTCCAAGGGGGTCCAACCGGCAGCTGGATCTTCATCTAATCTGGACAGTGATACTAGT TCCAACACAAAATCATCTGGTGCAAAAGATAACATAGGCAAGGGAGGAGGCAATAAGCAA CCGAAGAAGACAGCAAAGTTTCTCAGAGCTCGTTTAGGTGACAACTCATTAGCCACACTT GATTTAAGTCGTCCAAGTGCAAGCCCTGAACGTCCAGAAAGGGAATTACAAGGCCCTGAG ACAGGGTTGCCAGCGCGAGGTGCTTGGAAGAATGGCGGGGGGCAGAAACTCTTTTCGAGC AATGGACGGAAATAA

Peptide Sequence

PEP ID	Zm00001d028020_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:1:20533334:20539413:1 gene:Zm00001d028020 transcript:Zm00001d028020_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	MEHGGRMSRSQRNAALQIPTSFIYRRNEQAQRRGRGRGRNALHDRFDSHISSSAQNGQAT ADRRLDSVSGSFQSLSIGSSSGGAEVGQGSRTGQVLEQLSFPPLLDPDIPDNNVDSFHDE TSFPSLSEQQSRYALALSQSARGTARLGDESLFPPLPGSSGSNNNRGAGSVQQGLQSLAK STLAARLQQRSKGPVKVLNTARPRPPENVEALSSSTQTWPTPDQGLVLSGYSQLRSGTQP TRENAMPTISSNTVWNPVAPNKMKHSVSTPNLVSGGSSAQVSLSTAYGSNKSQDPPQGNQ TLPVPEDFRAANKTLVERMRSALGMDEDRYSAFKEIAGEYRQGIIGTLEYLSYVEQFGLS HLVPEMARLLPDPQKQRELADAYYTNTRFKSLQENGGGTSSQEGNRKKKGKGKAPVTESS AANDVNSALADNILETVRRLQSNQQAREGGAEVLSKDGYRPSKGVQPAAGSSSNLDSDTS SNTKSSGAKDNIGKGGGNKQPKKTAKFLRARLGDNSLATLDLSRPSASPERPERELQGPE TGLPARGAWKNGGGQKLFSSNGRK

Transcript Sequence

Transcript ID	Zm00001d028020_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:20533334:20539413:1 gene:Zm00001d028020 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	GAGCCTTCTCGTCTCCCCCCTTCGTCCGCACCCTATAACCTTTGCATCATCTTCCTTGCC CGCGCCCTAACCCTTGCACCCTCCTCCTTGCTGCCGCCGGGGCCGATCTCCGCTGCCGCC AGCCATGGAGGACTTCTGCGTGGTGTGCGCAGATACGCTGGAGTGGGTGGCCTACGGTCC GTGCGGTCACCGCGACGTGTGCTCCACCTGCGTCGCTCGCCTCCGTTTCGTGATGGACGA TAAGAAGTGCTGCATCTGCAAGACCGTCTGCCCCTTCGTCTTCGTTACTAAGGCCATGGG TGAATACACTAGAGTGGTTGCTGATTTCTCAGTGTTCCCCATTGGGGTAAATGAGGGCAA AGCTGGTGATTTCTGGTACCATGAGGATACTCAGGCATACTTTGATGATGTGGACCACTA CAGGATGATACGGGCAATGTGTCGACTTTCTTGTAGCGTTTGTGACAATGCAGAAGATCA GGTTGCCCTTGCTGCTCAAGCAAAGCGCAGAAGCAAGTTCAGGAGCATCGATCAACTAAA GGGACATTTATTCCATGTGCATAGGTTGCACATGTGCAATCTTTGCTTGGAGGGGAGGAA GGTGAAATACTTGATGAACTGGCATATTATGTGTTAGGAATCACACTAATTTGCGTTTCT AAGTGTCATCATTTCTTAGTTGATTTCATGGATTATGCTGTCAAATTTAAAAACAAAGTT TAGACACATGTTTTGAATGATCTATAGCTGAATTTTCTTTGTTCATGCATGGTTTTTTTC TCTTATAGATTCCTTCATTCTACATGTACAGTTCAGTAAGTTTATTTTGGCAACCAATTT ATGTATGCTATAGCTTACCTAGTAAGCTGTAATGTCTTAGTGAAAATTATAAAATATATT TTGAAATTGAAAATATTGTTTCCTTCCTGTAGATTTTTTTGCTTGGTGTAATAAGCAGAA CTTATTTTGTTTATTTATATAACATGGTTTGATTTCATGATTTGATAATGTTTTTTCAGA AGATGCATCTCAAATTCTCAACACACTGGAGACAGTTGCAATGGATAGCATATTTGAACT AGCTAACCAGAATACATGATTGTTGTTTACAACTAGCATGCTTGACATTGTTCTATCCGT TGCTTATGTGAGGTCTTTGGTGAAGAAACTTTATGATGCTGTTCTCTCTGATTCAAATGT AGGTCTAGGTTGAGGTGCGGACACACACCGGGGGGGGGGGGGGGCAAAGTGGGCCATGCC CCCCCTGATTTTTTGAAGTTACTTATATATGATATATATTTACTGTAAATTATAGAAAAT ATAAAAGGTATGATGGGCCAAAATGGCAAATTCAACTTCACTAGGCCTCCTGTCCACTAA CCAGCCCAGCCAAAAAGCCCTAGAATATGCCTTGATAGACCTCTCCGGCTCCCTCACCCT CAATCCCTCTACATCTTTCCAGCTGCCGCCAGCTTTTTGATGTTGTTGTGCGCGTGCAGG CCAGCAGGCGTGCCCCAAGTGCCAAGTCCGCAACTGCTTGCCACTTCTTTCCATAGTGCA ATCGCTAGGCGCGCAGGCATAGCGTCATGCAGTTTCTTGCCCCCCCCCCCCGGATTATTG TCCTGTGTCTGGCACTGTTGTTTAGGACAGTGACACATGGCATGTTTGGTTCAAGCCCTG GCAGGTAGCTCCCAAGGTAGACAACATTGCAAGGATGCATGTGTCTGAGGGACCACTTCC TGGTCCAGGTGGCTCTGTCCAGGAACTAAACCAACTAGACCAGTCTCCAAAGGGACACTT TGACTAGAAACGCTTGTTAATATATACCAATTTTAGTGTGAAAATCTTATATCATAAAAA CATTTACCGTGATGAATCAAGTACCATCAACATTTTTTTGTGAACCTGTGTAATGCCAAT TTTTTCCATATATTTAGGGTTGCTTTATTACTGTCATACGAGTGTTCACTATTTTTTCAT TGGTCATTGTTGTCTAGTAGTCAACATTGTGGAACTGGGGTTATGTAATTTGCACTCTAA ATTGCACTTACAATTTTCATATTCATGACTGTTTATTGAAATATTCTGTATATATTTCGA AGGTGTTCATTTGTGAACAAAAGCTTTATTCAAGGTCTCAGTTAGCTCAGCATATCAAGA CTGGTGACTCTGAAGTGGATGGCTCTGAGGTAGAGCGCAATGGTTTTGCTGGTCATCCAT TGTGTGAGTTTTGCAAAAGTTCATTTTACGGAGATAATGAGATTTACATGCATATGTCCA GGGAACACTATTCTTGCCACATATGCCAGAGGCAGCATCCTGAGCAGTATGACTATTTTC GGAACTATGATGACCTTGAGTTGCATTTTCGAAAGGACCATTTTCTTTGTGAAGATGAAG CATGCTTGGCAAAGAAGTTTGTTGTTTTTCTGAGTGAAGCAGAGCTGAAGAGAGGCATAA TGCTATGGAGCACGGTGGGCGAATGTCTCGTTCCCAGAGGAATGCTGCACTTCAGATACC TACCAGTTTTATATATCGCAGAAATGAGCAAGCACAACGGCGTGGCAGAGGTAGGGGGCG TAATGCTCTCCATGACCGATTTGACAGTCATATCTCATCATCTGCACAAAACGGCCAAGC AACTGCCGATCGCCGTCTTGATAGTGTTTCAGGGTCATTTCAGTCATTAAGCATTGGATC TAGTTCTGGGGGAGCTGAAGTTGGCCAAGGCTCGAGGACTGGACAAGTGCTCGAACAGTT GTCCTTCCCACCTCTTTTAGACCCAGATATTCCTGACAACAACGTTGATTCTTTTCATGA TGAAACCTCATTTCCTTCATTATCCGAGCAGCAATCAAGGTATGCACTAGCTCTCAGTCA GAGTGCAAGGGGCACTGCGAGGCTTGGGGATGAGTCACTATTCCCCCCTTTGCCTGGGTC TAGTGGGTCTAATAACAATAGGGGTGCTGGTTCAGTCCAACAGGGACTACAAAGTCTAGC CAAGAGCACACTTGCAGCAAGACTTCAACAACGTAGCAAGGGCCCTGTGAAGGTACTTAA TACTGCTCGGCCACGTCCCCCTGAAAATGTTGAAGCCCTCTCTAGTTCCACCCAGACATG GCCTACACCTGATCAGGGCCTAGTCCTGTCTGGATATTCTCAGCTTCGATCTGGAACTCA ACCAACAAGGGAAAATGCCATGCCAACTATCTCCAGTAACACAGTGTGGAATCCTGTTGC TCCAAACAAGATGAAGCACTCTGTTTCTACGCCTAATCTTGTGTCTGGTGGATCCTCTGC CCAAGTATCATTGAGTACAGCTTATGGTAGCAACAAAAGTCAGGATCCTCCTCAAGGTAA CCAAACTTTGCCTGTTCCAGAGGATTTCCGTGCTGCAAACAAAACTCTGGTTGAAAGAAT GCGTTCTGCTCTGGGAATGGACGAGGACAGGTACTCTGCATTCAAAGAGATTGCTGGTGA ATACCGTCAAGGTATCATAGGTACTCTGGAGTATCTTTCATATGTCGAGCAGTTTGGACT GTCACACCTTGTTCCTGAAATGGCTAGGCTATTGCCTGATCCTCAAAAACAGAGGGAACT TGCTGATGCATATTATACAAATACTCGATTTAAAAGCCTACAAGAAAACGGAGGTGGAAC TAGCTCACAAGAGGGCAACCGTAAAAAGAAGGGGAAGGGGAAAGCTCCTGTCACAGAAAG CAGTGCTGCTAATGATGTGAATAGTGCACTAGCAGATAACATTCTGGAGACTGTAAGAAG GCTTCAATCAAACCAGCAGGCTCGGGAAGGAGGAGCTGAGGTGCTGTCGAAGGATGGGTA TCGACCTTCCAAGGGGGTCCAACCGGCAGCTGGATCTTCATCTAATCTGGACAGTGATAC TAGTTCCAACACAAAATCATCTGGTGCAAAAGATAACATAGGCAAGGGAGGAGGCAATAA GCAACCGAAGAAGACAGCAAAGTTTCTCAGAGCTCGTTTAGGTGACAACTCATTAGCCAC ACTTGATTTAAGTCGTCCAAGTGCAAGCCCTGAACGTCCAGAAAGGGAATTACAAGGCCC TGAGACAGGGTTGCCAGCGCGAGGTGCTTGGAAGAATGGCGGGGGGCAGAAACTCTTTTC GAGCAATGGACGGAAATAAGTCATTCCAACTGCATAGCCGTGGGGACGGGGTTGACAGCG CCAGGTGCTTGGAAGAAATGGTGGCCAGAAACTCGTTTTTGAGCAATGGACAAAGTGAGT CACTGCAACTGCATTTAGGTGTGTCCATATACCTGATCAACAATTAGGCAATGCCCTGTT CATTGCTACCGGCAGACTGCGCAAATTTCATAGTCATCCATTTCAAATTCGTAATGATGT GGTGGGCAACATTTAATGTGGTACAAATATACTACTAGATTTTCTGTGCATTACAACGGA ACATGTTTGGTAGTATTGTCCAAAAAAAACTTGTCAAGCTAAAACCAAGATACAGAGGGT CCGTGTCAACATGTTACTATGTGTTTTCAGTGCTTTGTTTTTTTAAAGGAAATATCTTGC TGAAGTATGCAAACC