Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028019_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:20429469:20431896:1 gene:Zm00001d028019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase-like 40
Sequence

ATGGCGACGACCATGAACGTCAGGGCGCTGTGCCTGGCCGTCGCGACCGTCTTCTGCGTG
CTCTCACGGCAGAGCCTCGCCGCCGGCGAGGGCTCCAAGGAGGCGGACAGGATCGCCGCG
CTGCCTGGGCAGCCACCGGACGCGGCCGTCCAGCAGTACTCCGGCTACGTCAGCCTCGAT
GACAAGGCCGGCAAGTCGCTCTTCTACTACTTCGTGGAGGCCACCGCTGATCCGGCTACG
AAACCGCTTCTTCTCTGGCTCAATGGAGGGCCTGGCTGCTCTTCGTTTGGAATCGGAGCA
TTCCAGGAGATAGGTCCTTTCCGCGTGGACACGGACGGCAAGACCCTCTGCAATTTCAAA
TATGCCTGGAACACAGTGGCGAACGTGCTGTACCTGGAGAGCCCCGTGGGCGTGGGCTTC
TCGTACGCCGCCAACACGGGCGTGTACAAGGTGATGGGCGACAACATGACCGCGGACGAC
TCGCTCCAGTTCCTGCTCAAGTGGCTGGACCGCTTCCCGGAGTACAAGGGCCGCGACTTC
TTCATCGCCGGCGAGAGCTACGCCGGCCACTACGTCCCGGAGGTCGCCGGGTACGTGATC
GAGTACAAGGGCGTGGTGTTCGCGACGGTGCGCGGGTCCGGGCACATGGTACCGATCGAC
CAGCCGGGCCGCGGCTTCGCTCTCTTCTCGTCCTTCATCAAGGGGCAGCCGCTCCCCAAG
GCCGCGCCGATGGTCGACGGATGA

Peptide Sequence

PEP ID

Zm00001d028019_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:20429469:20431896:1 gene:Zm00001d028019 transcript:Zm00001d028019_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase-like 40
Sequence

MATTMNVRALCLAVATVFCVLSRQSLAAGEGSKEADRIAALPGQPPDAAVQQYSGYVSLD
DKAGKSLFYYFVEATADPATKPLLLWLNGGPGCSSFGIGAFQEIGPFRVDTDGKTLCNFK
YAWNTVANVLYLESPVGVGFSYAANTGVYKVMGDNMTADDSLQFLLKWLDRFPEYKGRDF
FIAGESYAGHYVPEVAGYVIEYKGVVFATVRGSGHMVPIDQPGRGFALFSSFIKGQPLPK
AAPMVDG

Transcript Sequence

Transcript ID

Zm00001d028019_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:20429469:20431896:1 gene:Zm00001d028019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase-like 40
Sequence

GGCGCACTTTCCATCGAAAGCCCCCGGCCTCTCTCTCTCTCTCGCCTCGCGGCGTTGGAT
TGAATGGCGACGACCATGAACGTCAGGGCGCTGTGCCTGGCCGTCGCGACCGTCTTCTGC
GTGCTCTCACGGCAGAGCCTCGCCGCCGGCGAGGGCTCCAAGGAGGCGGACAGGATCGCC
GCGCTGCCTGGGCAGCCACCGGACGCGGCCGTCCAGCAGTACTCCGGCTACGTCAGCCTC
GATGACAAGGCCGGCAAGTCGCTCTTCTACTACTTCGTGGAGGCCACCGCTGATCCGGCT
ACGAAACCGCTTCTTCTCTGGCTCAATGGAGGGCCTGGCTGCTCTTCGTTTGGAATCGGA
GCATTCCAGGAGATAGGTCCTTTCCGCGTGGACACGGACGGCAAGACCCTCTGCAATTTC
AAATATGCCTGGAACACAGTGGCGAACGTGCTGTACCTGGAGAGCCCCGTGGGCGTGGGC
TTCTCGTACGCCGCCAACACGGGCGTGTACAAGGTGATGGGCGACAACATGACCGCGGAC
GACTCGCTCCAGTTCCTGCTCAAGTGGCTGGACCGCTTCCCGGAGTACAAGGGCCGCGAC
TTCTTCATCGCCGGCGAGAGCTACGCCGGCCACTACGTCCCGGAGGTCGCCGGGTACGTG
ATCGAGTACAAGGGCGTGGTGTTCGCGACGGTGCGCGGGTCCGGGCACATGGTACCGATC
GACCAGCCGGGCCGCGGCTTCGCTCTCTTCTCGTCCTTCATCAAGGGGCAGCCGCTCCCC
AAGGCCGCGCCGATGGTCGACGGATGAAGAGCCACGGTCGTTGGGATTCCGGAGTTTCAC
CCTTGTCTCGTCAAGTCACCATGCATATTGTCTCCATTTCCACGTTAACTACCAGACCGT
GTACATACTGACTAAACGCTCGATCTGTGACCTCAACTGTTGTATGAATGTTTCGCTGCA
GTAAACTTACTAATTAAGGGTGTGTTTGGTTCTGATT