Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d028012_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:20300349:20303168:1 gene:Zm00001d028012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ras-related protein Rab-6A

Sequence

ATGGCGGTGGTGTCAGCGCTGGCCAAGTACAAGCTCGTGTTCCTGGGCAACCAGGCGGTG
GGCAAGACGGCCATCATCACCCGCTTCATGTACGACAAGTTCGACGACACCTACCAGGCA
GGATCATTGCTACTGAACCTGTCGTCGAAATCTGACTCTGACCTGTGGGTCCGTGCTGCT
GCCGCCGCCGCCGCTATATCCGCTCCCCCGTGCGTGATGCAGGCGACGATCGGGATCGAC
TTCCTGTCCAAGACGATGTACCTCGAGGACCGCACCGTTCGCCTTCAGCTCTGGGACACA
GCTGGGCAGGAGAGGTTCCGCAGCCTGATCCCGAGCTACATCAGAGACTCCTCCGTAGCC
GTCATCGTTTACGATGTGACCGGTATCCTGATTTTTTGTTCACTGGATGTCACCAGGAAA
GTGTCCACCGACGAAGGAGAAGCCAAAGCACAGGAGCATGGTGCTATGTTCATGGAGACC
AGTGCAAAAGCTGGGTTCAACGTCAAGCCCCTGTTCCGCAAGATCGCTGGATCCCTTCCA
GGACTGGACGCACTTTCGTCAGGAAAGCAGGAAGACATGGTCGACATAAACCTCAGACCT
GCCAGCGGTTCGTCGGCTTCAGGTGCAGCCGCGCAGCTGGAGCAGAAATCAGGCGGTTGC
TCCTGTTGA

Peptide Sequence

PEP ID

Zm00001d028012_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:20300349:20303168:1 gene:Zm00001d028012 transcript:Zm00001d028012_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ras-related protein Rab-6A

Sequence

MAVVSALAKYKLVFLGNQAVGKTAIITRFMYDKFDDTYQAGSLLLNLSSKSDSDLWVRAA
AAAAAISAPPCVMQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVA
VIVYDVTGILIFCSLDVTRKVSTDEGEAKAQEHGAMFMETSAKAGFNVKPLFRKIAGSLP
GLDALSSGKQEDMVDINLRPASGSSASGAAAQLEQKSGGCSC

Transcript Sequence

Transcript ID

Zm00001d028012_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:20300349:20303168:1 gene:Zm00001d028012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ras-related protein Rab-6A

Sequence

ATTCCAAGCGTCCAAACCCCCCATACAACCAACTCGCAACTCCTCGCGCGGTTCCTCGAT
CGAAGTCTCCAGACGCCCAGCGTCGATCGCGACGACGTACGCCAAGCCGCAGCAAAGCTC
CGGCGGTGTGCGGTGAGATGGCGGTGGTGTCAGCGCTGGCCAAGTACAAGCTCGTGTTCC
TGGGCAACCAGGCGGTGGGCAAGACGGCCATCATCACCCGCTTCATGTACGACAAGTTCG
ACGACACCTACCAGGCAGGATCATTGCTACTGAACCTGTCGTCGAAATCTGACTCTGACC
TGTGGGTCCGTGCTGCTGCCGCCGCCGCCGCTATATCCGCTCCCCCGTGCGTGATGCAGG
CGACGATCGGGATCGACTTCCTGTCCAAGACGATGTACCTCGAGGACCGCACCGTTCGCC
TTCAGCTCTGGGACACAGCTGGGCAGGAGAGGTTCCGCAGCCTGATCCCGAGCTACATCA
GAGACTCCTCCGTAGCCGTCATCGTTTACGATGTGACCGGTATCCTGATTTTTTGTTCAC
TGGATGTCACCAGGAAAGTGTCCACCGACGAAGGAGAAGCCAAAGCACAGGAGCATGGTG
CTATGTTCATGGAGACCAGTGCAAAAGCTGGGTTCAACGTCAAGCCCCTGTTCCGCAAGA
TCGCTGGATCCCTTCCAGGACTGGACGCACTTTCGTCAGGAAAGCAGGAAGACATGGTCG
ACATAAACCTCAGACCTGCCAGCGGTTCGTCGGCTTCAGGTGCAGCCGCGCAGCTGGAGC
AGAAATCAGGCGGTTGCTCCTGTTGAGACTTCGACAGTTTTGTGTTCAGAGAAGCTACAG
CAGTACTGCAACATCGAGTTAAGTACTTTCAGAGAGATTATGACGAAGAGTGTGTTTTCG
CCCAGACGTCCAGTAGTGATATACTGACATCCATAGCGAGAAGCCAATTTCTGTGTACAG
ATTTGTTTAGCAA