Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d028007_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:1:20105977:20131237:-1 gene:Zm00001d028007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAMTA-transcription factor 4 description:Calmodulin-binding transcription activator 2
Sequence	ATGGCGGAGGCGCGGCGCCACGCGGTCGCGCCGCAGCTAGATATTGAGCAGATATTGAAG GAAGCACAACACCGATGGCTACGACCCGCTGAGATATGTGAAATACTTAAAAATTACAGA AATTTCCACATTGCCCCAGAACCACCAAATAGACCTCCAAGTGGTTCACTTTTCTTGTTT GATCGGAAAGTATTGAGATATTTCCGGAAGGATGGCCATAGTTGGAGGAAGAAAAAGGAT GGAAAAACTGTCAAAGAAGCTCATGAAAGATTAAAATCTGGAAGTGTTGATGTGCTTCAT TGCTACTATGCTCATGGTGAAGGAAATGAAAACTTTCAGAGGAGGAGTTATTGGATGTTG GAGGAGGATTTTATGCACATTGTACTTGTACATTATCTTGAAGTCAAGGGCGGTAAATCA ACTTCTCGTATTAGAGGACATGATGATATGCTTCAAGCTGCTCGTACGGATAGCCCTTTA AGCCAGTTGCCTTCACAAACTACAGAGGGTGGAAACTCTCTTAGCGGACAAGCCTCAGAA TACGAGGAAACAGAATCAGATATATATTCAGGAGGAGCCGGATACCACCCTTTCTCTTGG ACGCAGCACCATGAAAATGGAGGTGGACCTGTGATTGGCACTTCTATCCCAAGCTCCTAC GTTCCTGCACTGCCTCTAGGTAACCTTCAAGGTTTCCCAGCTACAGTGACTAATACAGAC ATTTATTCTCGTCAAGATGCCTTACCAGTTACTCTTAATGAGCCTGGACTTGCAATTGAA TTCAATGGAGCAGATAATCAGTTGGATCCATCATCATTGAATGGCCTTGTTAAACCTTTC CTCCAAATGTCCACACCTCAAAGTACTGTTCCCTCAGAATTATTTCCTTTCACTGAAGAA CATGGAAATGAATCCTTCACATTTCATGAAGTATATAGTAATGGATTGAGTATCAAGGAT GCAGAGATTGTAGGCACCAATGAAGAATCAGTATGGAAGCTACCTGGTGCTATCAGCTCA ATTCCTTCAGAGGACAGTTTCCAGCAAAATGATAGATCGTTGGAGGAAACTATTAGTTAC CCTCTCTTGAAAACTCGCTCGTCTAATCTTTCTGAAATGCTGAAGGACAGCTTTAAGAAA AGTGATAGTTTCACGAGATGGATGAGCAAAGCACTTGGTGAAGTAGATTCCCAAATTAAG TCCAGTTCTGGAGTGTATTGGAACAGTGAAGAGACCAATAATATCATTGAAACATCAAGT TGTGATCAGTTGGATCAATGTACTATTGACCCAGTGCTCGCACAAGAGCAGCTGTTCAGT ATAGTTGATTTTTCTCCAAGCTGGACATATGCGGGCTCCAAGACTAGGGTTCTCATTAAC GGTAAATTCTTAAATTCTGCTGAGCTTAAAAGATGCAAGTGGTCATGTATGTTTGGTGAG GTCGAAGTTCCAGCAGAGATTTCAGCTGATGGGATTCTCAGATGTTATTCTCCGTCACAC AAACCTGGCAGGGTTCCTTTTTATGTCACATGTACCAACAGGTTGGCCTGCAGCGAAATC CGAGAGTTTGAGTTCCGGCCAAGTGTTACTCAATACATGGATGCCCCAAGTCCACATGGT GCTACAAACAAAACATATCTCCAGATGCGTCTTGATAACCTGCTGTCTTTGGGACACAAT GAGTACCAGGCAACGGTATCTAACCCCACTAAGGAGATGGTTGATTTGAGCAAGAAGATA AGCTCATTGATGACAGACAATGATTCCTGGTCGCAGTTGCTAAAATTGGCTAGTGATAAT GAGCCTGTCACTGATGATGATCAGGATGAGTTCTTTGAAAAGCACTTAAAGGAAAAATTG CATATCTGGCTTGTCCACAAAGCAAGCGATGGTGGCAAAGGCCCCAATGTGTTAGATGAC GAAGGGCAAGGTGTACTTCATCTGGCAGCTGCCCTAGGTTATGATTGGGTGATAAGGCCA GCAGTTTCTGCTGGTGTGAATATAAATTTCAGAGATGCTCATGGATGGACTGCACTCCAT TGGGCTGCATTTTGTGGCAGAGAGCGAACAGTTGTTGCACTTATCGCACTTGGTGCGGCT CCTGGAGCTTTGACAGACCCAACGCCAATTTTCCCTACAGGAAGCACACCAGCTGATCTG GCATCAGCTAATGGATACAAGGGGATCTCTGGTTTCTTGGCCGAGTCTTCTTTAACAAGT CATCTTCAGACCCTCGATCTTAAGGAAGGCAAGGGGAGCAATCCGCCAGAAATATCCGGT CTGCCTGGTATTGGAGATGTTACTGAAAGAAGAGCATCACCATTAGCAGGTGAAGGTCTT CAAGCTGGATCCATGGGAGATTCACTAGGTGCTATTCGAAATGCTGCCCAAGCTGCCGCT CGTATATATCAAGTTTTCAGGGTGCAGTCTTTCCAGAGAAAGCAAGCAGTTCAGTATGAG GATGACAATGGTGCAGTATCAGATGACCGTGCCATATCACTCTTATCTGTTAAACCATCT AAACCTGTACAGCTCGATCCCCTGCATGCTGCTGCAACTCGAATACAGAACAAGTACCGT GGATGGAAGGGAAGAAAGGAATTTCTACTTATCAGACAGCGCATTGTCAAGATCCAGGCT CATGTGCGAGGTCACCAAGTGAGGAAGCATTATCGTAAAATCATTTGGTCTGTTGGAATA GTGGAGAAGATCATATTGCGTTGGAGGCGAAAAGGGGCCGGGTTGCGTGGATTTCGGTCT ACAGAAGGTGCAACGGTGGGCAGCAGTAGTAATTTGATCCAAAATAAACCTGAGGATGAT TATGATTTCTTACAACAAGGACGGAAACAAACCGAAGAAAGGCTGCAGAAAGCTCTTGCC AGAGTGAAGTCGATGGCTCAGTACCCAGACGCTCGGGATCAGTATCAAAGGATTCTGACT GTTGTGACTAAAATCCAAGAATCGAAGGCCATGCAAGAAAAGATGCTCGAGGAGTCGACC GAGATGGACGAAGGCTTCTTTATGAGCGACTTCAAAGAGCTATGGGATGACGACATACCA ATGCCTTCTTGGTCATAG

Peptide Sequence

PEP ID	Zm00001d028007_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:1:20105977:20131237:-1 gene:Zm00001d028007 transcript:Zm00001d028007_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAMTA-transcription factor 4 description:Calmodulin-binding transcription activator 2
Sequence	MAEARRHAVAPQLDIEQILKEAQHRWLRPAEICEILKNYRNFHIAPEPPNRPPSGSLFLF DRKVLRYFRKDGHSWRKKKDGKTVKEAHERLKSGSVDVLHCYYAHGEGNENFQRRSYWML EEDFMHIVLVHYLEVKGGKSTSRIRGHDDMLQAARTDSPLSQLPSQTTEGGNSLSGQASE YEETESDIYSGGAGYHPFSWTQHHENGGGPVIGTSIPSSYVPALPLGNLQGFPATVTNTD IYSRQDALPVTLNEPGLAIEFNGADNQLDPSSLNGLVKPFLQMSTPQSTVPSELFPFTEE HGNESFTFHEVYSNGLSIKDAEIVGTNEESVWKLPGAISSIPSEDSFQQNDRSLEETISY PLLKTRSSNLSEMLKDSFKKSDSFTRWMSKALGEVDSQIKSSSGVYWNSEETNNIIETSS CDQLDQCTIDPVLAQEQLFSIVDFSPSWTYAGSKTRVLINGKFLNSAELKRCKWSCMFGE VEVPAEISADGILRCYSPSHKPGRVPFYVTCTNRLACSEIREFEFRPSVTQYMDAPSPHG ATNKTYLQMRLDNLLSLGHNEYQATVSNPTKEMVDLSKKISSLMTDNDSWSQLLKLASDN EPVTDDDQDEFFEKHLKEKLHIWLVHKASDGGKGPNVLDDEGQGVLHLAAALGYDWVIRP AVSAGVNINFRDAHGWTALHWAAFCGRERTVVALIALGAAPGALTDPTPIFPTGSTPADL ASANGYKGISGFLAESSLTSHLQTLDLKEGKGSNPPEISGLPGIGDVTERRASPLAGEGL QAGSMGDSLGAIRNAAQAAARIYQVFRVQSFQRKQAVQYEDDNGAVSDDRAISLLSVKPS KPVQLDPLHAAATRIQNKYRGWKGRKEFLLIRQRIVKIQAHVRGHQVRKHYRKIIWSVGI VEKIILRWRRKGAGLRGFRSTEGATVGSSSNLIQNKPEDDYDFLQQGRKQTEERLQKALA RVKSMAQYPDARDQYQRILTVVTKIQESKAMQEKMLEESTEMDEGFFMSDFKELWDDDIP MPSWS

Transcript Sequence

Transcript ID	Zm00001d028007_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:20105977:20131237:-1 gene:Zm00001d028007 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CAMTA-transcription factor 4 description:Calmodulin-binding transcription activator 2
Sequence	CAGTTTCCACGATGACCCAGCTCCAACGGACCGCCCCCTTCCAATGCCCAGTTGCCCACA CCCTCGCTGAGCCCGCCCTCTCCTGACTCGTCGTCACCCCACCTCGTCGACGGTTGGCTC GTCCAGTTCTTTCCTCCTCTCTCCCCGCTTCACCACCAAAACCCCGGGATCAAGCAGAGG ACGCCACTCACAGGCCCCCCAGCACCTCTCCACTCCTCCACAAAACCCTGCGACAAATCC GGGCGACCGACTCACGGAGCGATCGCCATCGGAACGGTAGCCACTAGGGCCGGAGGGGCT CGCGCCTTGTGGTGCCGTGGTGGTGGCCTCACTCCGCGGCGGCGCCTGGTCTTGTTCCGC TTCGTTGCGCGCGGCGATGGCGGAGGCGCGGCGCCACGCGGTCGCGCCGCAGCTAGATAT TGAGCAGATATTGAAGGAAGCACAACACCGATGGCTACGACCCGCTGAGATATGTGAAAT ACTTAAAAATTACAGAAATTTCCACATTGCCCCAGAACCACCAAATAGACCTCCAAGTGG TTCACTTTTCTTGTTTGATCGGAAAGTATTGAGATATTTCCGGAAGGATGGCCATAGTTG GAGGAAGAAAAAGGATGGAAAAACTGTCAAAGAAGCTCATGAAAGATTAAAATCTGGAAG TGTTGATGTGCTTCATTGCTACTATGCTCATGGTGAAGGAAATGAAAACTTTCAGAGGAG GAGTTATTGGATGTTGGAGGAGGATTTTATGCACATTGTACTTGTACATTATCTTGAAGT CAAGGGCGGTAAATCAACTTCTCGTATTAGAGGACATGATGATATGCTTCAAGCTGCTCG TACGGATAGCCCTTTAAGCCAGTTGCCTTCACAAACTACAGAGGGTGGAAACTCTCTTAG CGGACAAGCCTCAGAATACGAGGAAACAGAATCAGATATATATTCAGGAGGAGCCGGATA CCACCCTTTCTCTTGGACGCAGCACCATGAAAATGGAGGTGGACCTGTGATTGGCACTTC TATCCCAAGCTCCTACGTTCCTGCACTGCCTCTAGGTAACCTTCAAGGTTTCCCAGCTAC AGTGACTAATACAGACATTTATTCTCGTCAAGATGCCTTACCAGTTACTCTTAATGAGCC TGGACTTGCAATTGAATTCAATGGAGCAGATAATCAGTTGGATCCATCATCATTGAATGG CCTTGTTAAACCTTTCCTCCAAATGTCCACACCTCAAAGTACTGTTCCCTCAGAATTATT TCCTTTCACTGAAGAACATGGAAATGAATCCTTCACATTTCATGAAGTATATAGTAATGG ATTGAGTATCAAGGATGCAGAGATTGTAGGCACCAATGAAGAATCAGTATGGAAGCTACC TGGTGCTATCAGCTCAATTCCTTCAGAGGACAGTTTCCAGCAAAATGATAGATCGTTGGA GGAAACTATTAGTTACCCTCTCTTGAAAACTCGCTCGTCTAATCTTTCTGAAATGCTGAA GGACAGCTTTAAGAAAAGTGATAGTTTCACGAGATGGATGAGCAAAGCACTTGGTGAAGT AGATTCCCAAATTAAGTCCAGTTCTGGAGTGTATTGGAACAGTGAAGAGACCAATAATAT CATTGAAACATCAAGTTGTGATCAGTTGGATCAATGTACTATTGACCCAGTGCTCGCACA AGAGCAGCTGTTCAGTATAGTTGATTTTTCTCCAAGCTGGACATATGCGGGCTCCAAGAC TAGGGTTCTCATTAACGGTAAATTCTTAAATTCTGCTGAGCTTAAAAGATGCAAGTGGTC ATGTATGTTTGGTGAGGTCGAAGTTCCAGCAGAGATTTCAGCTGATGGGATTCTCAGATG TTATTCTCCGTCACACAAACCTGGCAGGGTTCCTTTTTATGTCACATGTACCAACAGGTT GGCCTGCAGCGAAATCCGAGAGTTTGAGTTCCGGCCAAGTGTTACTCAATACATGGATGC CCCAAGTCCACATGGTGCTACAAACAAAACATATCTCCAGATGCGTCTTGATAACCTGCT GTCTTTGGGACACAATGAGTACCAGGCAACGGTATCTAACCCCACTAAGGAGATGGTTGA TTTGAGCAAGAAGATAAGCTCATTGATGACAGACAATGATTCCTGGTCGCAGTTGCTAAA ATTGGCTAGTGATAATGAGCCTGTCACTGATGATGATCAGGATGAGTTCTTTGAAAAGCA CTTAAAGGAAAAATTGCATATCTGGCTTGTCCACAAAGCAAGCGATGGTGGCAAAGGCCC CAATGTGTTAGATGACGAAGGGCAAGGTGTACTTCATCTGGCAGCTGCCCTAGGTTATGA TTGGGTGATAAGGCCAGCAGTTTCTGCTGGTGTGAATATAAATTTCAGAGATGCTCATGG ATGGACTGCACTCCATTGGGCTGCATTTTGTGGCAGAGAGCGAACAGTTGTTGCACTTAT CGCACTTGGTGCGGCTCCTGGAGCTTTGACAGACCCAACGCCAATTTTCCCTACAGGAAG CACACCAGCTGATCTGGCATCAGCTAATGGATACAAGGGGATCTCTGGTTTCTTGGCCGA GTCTTCTTTAACAAGTCATCTTCAGACCCTCGATCTTAAGGAAGGCAAGGGGAGCAATCC GCCAGAAATATCCGGTCTGCCTGGTATTGGAGATGTTACTGAAAGAAGAGCATCACCATT AGCAGGTGAAGGTCTTCAAGCTGGATCCATGGGAGATTCACTAGGTGCTATTCGAAATGC TGCCCAAGCTGCCGCTCGTATATATCAAGTTTTCAGGGTGCAGTCTTTCCAGAGAAAGCA AGCAGTTCAGTATGAGGATGACAATGGTGCAGTATCAGATGACCGTGCCATATCACTCTT ATCTGTTAAACCATCTAAACCTGTACAGCTCGATCCCCTGCATGCTGCTGCAACTCGAAT ACAGAACAAGTACCGTGGATGGAAGGGAAGAAAGGAATTTCTACTTATCAGACAGCGCAT TGTCAAGATCCAGGCTCATGTGCGAGGTCACCAAGTGAGGAAGCATTATCGTAAAATCAT TTGGTCTGTTGGAATAGTGGAGAAGATCATATTGCGTTGGAGGCGAAAAGGGGCCGGGTT GCGTGGATTTCGGTCTACAGAAGGTGCAACGGTGGGCAGCAGTAGTAATTTGATCCAAAA TAAACCTGAGGATGATTATGATTTCTTACAACAAGGACGGAAACAAACCGAAGAAAGGCT GCAGAAAGCTCTTGCCAGAGTGAAGTCGATGGCTCAGTACCCAGACGCTCGGGATCAGTA TCAAAGGATTCTGACTGTTGTGACTAAAATCCAAGAATCGAAGGCCATGCAAGAAAAGAT GCTCGAGGAGTCGACCGAGATGGACGAAGGCTTCTTTATGAGCGACTTCAAAGAGCTATG GGATGACGACATACCAATGCCTTCTTGGTCATAGCAACTTGTGTGTTTATGCTTGTAAAT TACTTACATGTATGTTAGTGTTACCAAACTGATGACCCGTAGTTGCATTGCTAAGTTAAC CATATCTAGCGTGTATATATTTTAGTTTGGTTCAGCTCTTAGTCATTTAGCTGTAGTGTT TTGTACAGTATATGTTGTACAGAAGGAAAAACATATTTACTGAGGACTCCTTGGGAATGG GATGGATATATATCTACGGCTGACTTGT