Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027991_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:19585447:19586449:1 gene:Zm00001d027991 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 5 description:HB-type transcription factor

Sequence

CGCTGGAAGACCAAGACGCTCGAGCGCGACTTCGCGGCGCTGCGCGCGCGCCACGACGCC
CTCCGCGCCGACTGCGACGCGCTCCGCCGCGACAAGGACGCCCTCGCCGCCGAGATAAGG
GAGCTGAGGCAGAAGCTGCTGCCCAAGCCGGAAGCCACGGTGAAGCTGGAGGCGACGACG
GGCAATGACACGGCGGAGGAGCGCCGCCAGGCGACGGCCGGCGCGCCGCCCGCGGGGGCC
TGCAAGGACGGCTCCTCGGACAGCGACTCCAGCGTGGTCTTCAGCGACGTCGAGGCGTCG
CCCTACTCCGGCGGCGCGGCGTTCGAGCCGCCGGCCTTGGCCGGGCTCGGCGCGCCGTTC
CTGGACACGTCGGTGGCGCCGACGGGCTGCTCGTCTCCCCCCGTTTTCGTCGAGACCAAG
TGGCAGCAGCACGGGCCGACACAGTACCCGTTCCCATTCGACTCGTACAAGGCCTGCGCC
GGCTATGGCTTCACGGAGGAATGGCGACGGCGGCGCGGCGGGGTTCTTCTCCGAGGATCA
CGCCTCCAGCCTCAACTTCAACTGGTGCCCGAGTGGCATCCAGGGCTGGGAGTGAAGAGG
GGTTTTTGA

Peptide Sequence

PEP ID

Zm00001d027991_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:19585447:19586449:1 gene:Zm00001d027991 transcript:Zm00001d027991_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 5 description:HB-type transcription factor

Sequence

RWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIRELRQKLLPKPEATVKLEATT
GNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWRRRRGGVLLRGS
RLQPQLQLVPEWHPGLGVKRGF

Transcript Sequence

Transcript ID

Zm00001d027991_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:19585447:19586449:1 gene:Zm00001d027991 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 5 description:HB-type transcription factor

Sequence

CCGCTGGAAGACCAAGACGCTCGAGCGCGACTTCGCGGCGCTGCGCGCGCGCCACGACGC
CCTCCGCGCCGACTGCGACGCGCTCCGCCGCGACAAGGACGCCCTCGCCGCCGAGATAAG
GGAGCTGAGGCAGAAGCTGCTGCCCAAGCCGGAAGCCACGGTGAAGCTGGAGGCGACGAC
GGGCAATGACACGGCGGAGGAGCGCCGCCAGGCGACGGCCGGCGCGCCGCCCGCGGGGGC
CTGCAAGGACGGCTCCTCGGACAGCGACTCCAGCGTGGTCTTCAGCGACGTCGAGGCGTC
GCCCTACTCCGGCGGCGCGGCGTTCGAGCCGCCGGCCTTGGCCGGGCTCGGCGCGCCGTT
CCTGGACACGTCGGTGGCGCCGACGGGCTGCTCGTCTCCCCCCGTTTTCGTCGAGACCAA
GTGGCAGCAGCACGGGCCGACACAGTACCCGTTCCCATTCGACTCGTACAAGGCCTGCGC
CGGCTATGGCTTCACGGAGGAATGGCGACGGCGGCGCGGCGGGGTTCTTCTCCGAGGATC
ACGCCTCCAGCCTCAACTTCAACTGGTGCCCGAGTGGCATCCAGGGCTGGGAGTGAAGAG
GGGTTTTTGATCTGCACGGCTAGTGTAAAAAAACCGATGTTACGGTGGCATTTGTACATG
CATGGAACTGGAGTCTAGTGACCTGGCCTGGCGAGTGTGGTGTGGCCAAAGCTAGAGGAC
ATCCAGCGCAAAAGGCGGGAACAGGAGCAGTAGTAGCCTGTAACAATAACGGAATAACTT
GAGCCAGGCTAGTAAAAAAAGAGGATGT