Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027963_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:18460171:18462291:1 gene:Zm00001d027963 gene_biotype:protein_coding transcript_biotype:protein_coding description:Intron maturase type II family protein
Sequence

ATGCCGCCGCGCGCGGTGCTCCGCCGCCTTCTCCCCACCAACCCTCACCACTCCGCTGCT
CGCCACGCTCCGCGTCAGGCGCCTCCTCCGCCTTCAGCGATCGACGAGGGACCCCTTCCC
GACCCGTATGCGCTCCTCGTTCACGACCCCATCGACCTGCTCTCATCCCTGTGGCGCCGC
GCGTTCGCGCACCCGCTCCCCTCCCCCTTCCCCAACCTCTCCGGCTATGCCTCCCGCCTC
GATCTTTGGCTCCTCTCCTACCAGCGTGCCTGCGCCCATGCCACGGGCACCTTCCCGCCA
CGCCACGCCGTCCCGCTCCCCACTCTTCATTCGCTCCTCCGCCTTCGCGCCTCCGCGCTC
CGCCGCCACCCCGCCTTCCCCTGGGGCGCATCCACGCACCTCCTCCTCCGTTCCCCCGCC
GACAAGCCCTCCACCGTCCCCATCTCCCGCCGCAAGCTCGAAGCCCGGTTCGCGGACGCG
CCGCCGCCGTTCCAGGACCGCGTCGTCCAGGAGCTCCTCCTCTTCCTCCTTGAACCAGTC
CTCGAGCCGCGCTTCTCCCCTAAATCTCATGCCTTCCGCCCCGGCCGCGGGCCCCACAGC
GCCATCCGCTCTGTTCGGTCTCGCTTTGCCGCCTACCTCTGGTTCGTCTCCGCCGACCTC
ACGGCGGTGGTCGACGGGCTCTCGCCGGACACCATCCTGTCATGCGTCCAGAAGGCCGTC
TCCGACCGTAAGGTGCTGTCGTTACTCAAGTCCGCGCTCACCGCTCCTGTCAGGCCTGGG
TCTGTACCGCCAATGGAGAAGGACCTCGATGGGCTGACCAAGAAGAGGCTGAAAAGGAAG
GTGCTCAGGAAGAGCAGGAAGAAGAAGGTGCTTAACGAGAATGAGCCTAAGCCTGACCCA
TATTGGTTGAGGATGTTCTTTGGGTTTGCTCCAGAGCAGGCACGCCACGTGCCAAATTAT
GGACATTGCGGGATAATCAGTCCTTTGCTTGCCAATGTGTGCCTTAACGAATTGGATTGG
TGGATGGAGGAGAAAATTAACCAGTACTTTTGCCCATCCAAGCATGATTCAATTTGGAAG
GAGGTAGGTGATGATGGGTGCCACAATCCCGCTTGGCCTGAGTTCGTCCCATCAGCTGGG
AAGGAGAAGACAAGAAAAATGGATTTCCTTCGATTTGGTTCCCATGTCTTAATTGGGATC
AGGGGGCCGAGGGAGGATGCAGTTGACATAAGGAGACAACTGATGGAGTTTTGTGAGAGA
ACATTTGGTTTAAGGCCAGAGAATTCGATGGTGGAAATTGAGCATATCACAAGGGGGATT
GAATTCTTGGATCATGTGATCACGCGCAGGGTCATCTACCCAACCTTACGATATACTGCC
AGTGGAGGGAACATTGTCAGCGAGAAGGGTGTCGGAACACTGTTGTCTGTAACAGCGAGC
CTGCAGAGGTGCATAAGGCATTTCAGGAAGCTTGAGCTTGTAAAGGGGGACAGGGATCCT
GAGCCATTGCCGTGCTCACCGATGCTGTACTCTGGGCAGGCGCACACTAATTCCCAGATG
AACAAGTTTCTTGAGACAATGGCTGATTGGTACAGGTATGCAGATAACCGGAAGAAGATT
GTAGGGTTCTGTGCTTATGTCATAAGGAGCTCACTAGCAAAGCTCTACGCGGCAAGGTAT
AGACTGAAGTCTCGAGCTAAGGTCTACAAGATTGCTTCACGGGATCTTAGCCGTCCTTTG
AGAGAAAGCACAAGGAATGATGCACCAGAATACTCTGATCTTTTGAGGATGGGGCTAGTT
GATGTTATTGAAGGTGTACAATTTGCGCGCATGTCATCGATTCCAACGTGCGACTACACA
CCTTTCCCTAGGAACTGGGTGCCACACCATGAACTTATATTGCTTGAGTATATTAAGCTG
CAAGATCCAAAGTTCTTTTGTGAACTTCACAAGACTATCAAACGTCAGGAAATAAGTTCA
CCGCAGGATGATGTATCAAAGATGGTGTGGTATTATAAAGTCCACGGTGTTTATGATGAC
AAAAGATCCTTAGTTGGCGCCAAGGAATTGAGAAATGATGAAATTATCAATGGGAACAAG
CAACTTCTATTGGATACATAG

Peptide Sequence

PEP ID

Zm00001d027963_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:18460171:18462291:1 gene:Zm00001d027963 transcript:Zm00001d027963_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Intron maturase type II family protein
Sequence

MPPRAVLRRLLPTNPHHSAARHAPRQAPPPPSAIDEGPLPDPYALLVHDPIDLLSSLWRR
AFAHPLPSPFPNLSGYASRLDLWLLSYQRACAHATGTFPPRHAVPLPTLHSLLRLRASAL
RRHPAFPWGASTHLLLRSPADKPSTVPISRRKLEARFADAPPPFQDRVVQELLLFLLEPV
LEPRFSPKSHAFRPGRGPHSAIRSVRSRFAAYLWFVSADLTAVVDGLSPDTILSCVQKAV
SDRKVLSLLKSALTAPVRPGSVPPMEKDLDGLTKKRLKRKVLRKSRKKKVLNENEPKPDP
YWLRMFFGFAPEQARHVPNYGHCGIISPLLANVCLNELDWWMEEKINQYFCPSKHDSIWK
EVGDDGCHNPAWPEFVPSAGKEKTRKMDFLRFGSHVLIGIRGPREDAVDIRRQLMEFCER
TFGLRPENSMVEIEHITRGIEFLDHVITRRVIYPTLRYTASGGNIVSEKGVGTLLSVTAS
LQRCIRHFRKLELVKGDRDPEPLPCSPMLYSGQAHTNSQMNKFLETMADWYRYADNRKKI
VGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRDLSRPLRESTRNDAPEYSDLLRMGLV
DVIEGVQFARMSSIPTCDYTPFPRNWVPHHELILLEYIKLQDPKFFCELHKTIKRQEISS
PQDDVSKMVWYYKVHGVYDDKRSLVGAKELRNDEIINGNKQLLLDT

Transcript Sequence

Transcript ID

Zm00001d027963_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:18460171:18462291:1 gene:Zm00001d027963 gene_biotype:protein_coding transcript_biotype:protein_coding description:Intron maturase type II family protein
Sequence

ATGCCGCCGCGCGCGGTGCTCCGCCGCCTTCTCCCCACCAACCCTCACCACTCCGCTGCT
CGCCACGCTCCGCGTCAGGCGCCTCCTCCGCCTTCAGCGATCGACGAGGGACCCCTTCCC
GACCCGTATGCGCTCCTCGTTCACGACCCCATCGACCTGCTCTCATCCCTGTGGCGCCGC
GCGTTCGCGCACCCGCTCCCCTCCCCCTTCCCCAACCTCTCCGGCTATGCCTCCCGCCTC
GATCTTTGGCTCCTCTCCTACCAGCGTGCCTGCGCCCATGCCACGGGCACCTTCCCGCCA
CGCCACGCCGTCCCGCTCCCCACTCTTCATTCGCTCCTCCGCCTTCGCGCCTCCGCGCTC
CGCCGCCACCCCGCCTTCCCCTGGGGCGCATCCACGCACCTCCTCCTCCGTTCCCCCGCC
GACAAGCCCTCCACCGTCCCCATCTCCCGCCGCAAGCTCGAAGCCCGGTTCGCGGACGCG
CCGCCGCCGTTCCAGGACCGCGTCGTCCAGGAGCTCCTCCTCTTCCTCCTTGAACCAGTC
CTCGAGCCGCGCTTCTCCCCTAAATCTCATGCCTTCCGCCCCGGCCGCGGGCCCCACAGC
GCCATCCGCTCTGTTCGGTCTCGCTTTGCCGCCTACCTCTGGTTCGTCTCCGCCGACCTC
ACGGCGGTGGTCGACGGGCTCTCGCCGGACACCATCCTGTCATGCGTCCAGAAGGCCGTC
TCCGACCGTAAGGTGCTGTCGTTACTCAAGTCCGCGCTCACCGCTCCTGTCAGGCCTGGG
TCTGTACCGCCAATGGAGAAGGACCTCGATGGGCTGACCAAGAAGAGGCTGAAAAGGAAG
GTGCTCAGGAAGAGCAGGAAGAAGAAGGTGCTTAACGAGAATGAGCCTAAGCCTGACCCA
TATTGGTTGAGGATGTTCTTTGGGTTTGCTCCAGAGCAGGCACGCCACGTGCCAAATTAT
GGACATTGCGGGATAATCAGTCCTTTGCTTGCCAATGTGTGCCTTAACGAATTGGATTGG
TGGATGGAGGAGAAAATTAACCAGTACTTTTGCCCATCCAAGCATGATTCAATTTGGAAG
GAGGTAGGTGATGATGGGTGCCACAATCCCGCTTGGCCTGAGTTCGTCCCATCAGCTGGG
AAGGAGAAGACAAGAAAAATGGATTTCCTTCGATTTGGTTCCCATGTCTTAATTGGGATC
AGGGGGCCGAGGGAGGATGCAGTTGACATAAGGAGACAACTGATGGAGTTTTGTGAGAGA
ACATTTGGTTTAAGGCCAGAGAATTCGATGGTGGAAATTGAGCATATCACAAGGGGGATT
GAATTCTTGGATCATGTGATCACGCGCAGGGTCATCTACCCAACCTTACGATATACTGCC
AGTGGAGGGAACATTGTCAGCGAGAAGGGTGTCGGAACACTGTTGTCTGTAACAGCGAGC
CTGCAGAGGTGCATAAGGCATTTCAGGAAGCTTGAGCTTGTAAAGGGGGACAGGGATCCT
GAGCCATTGCCGTGCTCACCGATGCTGTACTCTGGGCAGGCGCACACTAATTCCCAGATG
AACAAGTTTCTTGAGACAATGGCTGATTGGTACAGGTATGCAGATAACCGGAAGAAGATT
GTAGGGTTCTGTGCTTATGTCATAAGGAGCTCACTAGCAAAGCTCTACGCGGCAAGGTAT
AGACTGAAGTCTCGAGCTAAGGTCTACAAGATTGCTTCACGGGATCTTAGCCGTCCTTTG
AGAGAAAGCACAAGGAATGATGCACCAGAATACTCTGATCTTTTGAGGATGGGGCTAGTT
GATGTTATTGAAGGTGTACAATTTGCGCGCATGTCATCGATTCCAACGTGCGACTACACA
CCTTTCCCTAGGAACTGGGTGCCACACCATGAACTTATATTGCTTGAGTATATTAAGCTG
CAAGATCCAAAGTTCTTTTGTGAACTTCACAAGACTATCAAACGTCAGGAAATAAGTTCA
CCGCAGGATGATGTATCAAAGATGGTGTGGTATTATAAAGTCCACGGTGTTTATGATGAC
AAAAGATCCTTAGTTGGCGCCAAGGAATTGAGAAATGATGAAATTATCAATGGGAACAAG
CAACTTCTATTGGATACATAG