Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027949_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:18159860:18161446:1 gene:Zm00001d027949 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine/DOPA decarboxylase 2

Sequence

ATGGCCCCGCCATCACACTTCTACAACAACAATGGCGCCCCGCAGGACGCCGCCAGCTAC
CTCCATGCGGGACCAGGAAATGCACCTCCACAGGACTCCTGCTTGCTCGACGCAGACGAG
TTCCGCCGGCAGGGCCACCAAGTCATCGACTTCATCGCCGACTACTACGGCCGCATGGAC
GACTACCCCGTGCACCCCAGTGTCAACCCCGGCTTCCTGCGCCGCCAGCTCCCCGACAAG
GCGCCGTCGCGTCCGGAGTCGTCCGACGCGTTCGGTGCCGCGCTGCGGGACGTCCGTGAC
CTCATCCTGCCAGGCATGACGCACTGGCAGAGCGCCCGCCACTTCGCGCACTTCCCGGCG
TCCAGCAGCACCGTCGGCGCCCTCGGCGAGGCCCTCACGGCCGGCATCAACTCCGTCCCT
TTCACGTGGGCCGCCTCGCCGGCCGCCACGGAGCTCGAGATGGTCGTCGTGGACTGGCTC
GGCAAGGCGCTCCACCTGCCCGAGAGCCTAATGTTCTGCGGCGGCGGCGGAGGCACGCTT
CTCGGCACCACGTGCGAGGCCATCCTCTGCGCCCTCGTCGCCGCGAGGGACCGCAAGCTC
GCGGACATCGGCAGCGGGAGGATCGGAGACCTCGTCGTCTACTGTTCCGACCAGACGCAC
TTTGCCTTCCGCAAGGCAGCGCATATTGCCGGGATCCACCGCGACAACTGCCGCGAGATC
GCCACGTACCGTGACGACATGTTCGCGCTCTCGCCAGCCGAGCTGCAGGCCACCATGCAG
GCGGACGTGGACGCCGGGCTGGTCCCGCTCTTCCTGTGCGCGACGGTCGGAACCACTCAG
ACGACGGCCGTCGACCCTATCAGAGGGCTCTGCGCCGTCGCAGCGACACACGGTGTCTGG
GTGCACGTGGATGCGGCCTACGCGGGCTCGGCGCTCGTCTGCCCAGAGTTCCGGCACCTG
ATCGACGGCGCCGAAGCCGTGGACTCCTTCAGCATGAATGCTCACAAGTGGCTGCTGGCC
AACAACGACTGCTGCGCTCTGTGGGTGAAGAAGCCAGCTCTGCTCGTCGCGGCTCTCGGC
ACGGAGCAGGAGTACATCCTCAAAGACGCGGCCGCTGAGGGGCACGACGTCGTGGACTAC
AAGGACTGGTCCGTGACGCTGACCCGCCGGTTCCGCGCGCTCAAGCTATGGCTCGTGCTC
CGCTGCTATGGCGTCGAGGGCCTGCGCGACCACATCCGCGCCCATGTGCGCATGGCCGCG
TCATTCGAGGACATGGTCAAGGCCGACCCACGCTTCCAAGTCATGGCAAAGAGGCAATTC
GCACTCGTTTGCTTTAGGCTCCGGGCGCCCGAGGAGATGGGCGGCCCCAAGGCGGCCAAC
GCGCTCAACCGAAGGCTCCTAGAGGAGGTGAATGCGGCTTGCTCCGGACCCTACATGAGC
TCCGCTAATGTTGGTGGCGTCTACATGCTCAGATGCGCTATCGGGAGCACGCTTACGGAG
GAGCGACACGTCCGCGAGGCATGGACGGTTGTGCAGAACGTAGCTTCTTCCCTCCTCGCT
AAAATGGAGATGCATGAAGATTATTGA

Peptide Sequence

PEP ID

Zm00001d027949_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:18159860:18161446:1 gene:Zm00001d027949 transcript:Zm00001d027949_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine/DOPA decarboxylase 2

Sequence

MAPPSHFYNNNGAPQDAASYLHAGPGNAPPQDSCLLDADEFRRQGHQVIDFIADYYGRMD
DYPVHPSVNPGFLRRQLPDKAPSRPESSDAFGAALRDVRDLILPGMTHWQSARHFAHFPA
SSSTVGALGEALTAGINSVPFTWAASPAATELEMVVVDWLGKALHLPESLMFCGGGGGTL
LGTTCEAILCALVAARDRKLADIGSGRIGDLVVYCSDQTHFAFRKAAHIAGIHRDNCREI
ATYRDDMFALSPAELQATMQADVDAGLVPLFLCATVGTTQTTAVDPIRGLCAVAATHGVW
VHVDAAYAGSALVCPEFRHLIDGAEAVDSFSMNAHKWLLANNDCCALWVKKPALLVAALG
TEQEYILKDAAAEGHDVVDYKDWSVTLTRRFRALKLWLVLRCYGVEGLRDHIRAHVRMAA
SFEDMVKADPRFQVMAKRQFALVCFRLRAPEEMGGPKAANALNRRLLEEVNAACSGPYMS
SANVGGVYMLRCAIGSTLTEERHVREAWTVVQNVASSLLAKMEMHEDY

Transcript Sequence

Transcript ID

Zm00001d027949_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:18159860:18161446:1 gene:Zm00001d027949 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tyrosine/DOPA decarboxylase 2

Sequence

ATGGCCCCGCCATCACACTTCTACAACAACAATGGCGCCCCGCAGGACGCCGCCAGCTAC
CTCCATGCGGGACCAGGAAATGCACCTCCACAGGACTCCTGCTTGCTCGACGCAGACGAG
TTCCGCCGGCAGGGCCACCAAGTCATCGACTTCATCGCCGACTACTACGGCCGCATGGAC
GACTACCCCGTGCACCCCAGTGTCAACCCCGGCTTCCTGCGCCGCCAGCTCCCCGACAAG
GCGCCGTCGCGTCCGGAGTCGTCCGACGCGTTCGGTGCCGCGCTGCGGGACGTCCGTGAC
CTCATCCTGCCAGGCATGACGCACTGGCAGAGCGCCCGCCACTTCGCGCACTTCCCGGCG
TCCAGCAGCACCGTCGGCGCCCTCGGCGAGGCCCTCACGGCCGGCATCAACTCCGTCCCT
TTCACGTGGGCCGCCTCGCCGGCCGCCACGGAGCTCGAGATGGTCGTCGTGGACTGGCTC
GGCAAGGCGCTCCACCTGCCCGAGAGCCTAATGTTCTGCGGCGGCGGCGGAGGCACGCTT
CTCGGCACCACGTGCGAGGCCATCCTCTGCGCCCTCGTCGCCGCGAGGGACCGCAAGCTC
GCGGACATCGGCAGCGGGAGGATCGGAGACCTCGTCGTCTACTGTTCCGACCAGACGCAC
TTTGCCTTCCGCAAGGCAGCGCATATTGCCGGGATCCACCGCGACAACTGCCGCGAGATC
GCCACGTACCGTGACGACATGTTCGCGCTCTCGCCAGCCGAGCTGCAGGCCACCATGCAG
GCGGACGTGGACGCCGGGCTGGTCCCGCTCTTCCTGTGCGCGACGGTCGGAACCACTCAG
ACGACGGCCGTCGACCCTATCAGAGGGCTCTGCGCCGTCGCAGCGACACACGGTGTCTGG
GTGCACGTGGATGCGGCCTACGCGGGCTCGGCGCTCGTCTGCCCAGAGTTCCGGCACCTG
ATCGACGGCGCCGAAGCCGTGGACTCCTTCAGCATGAATGCTCACAAGTGGCTGCTGGCC
AACAACGACTGCTGCGCTCTGTGGGTGAAGAAGCCAGCTCTGCTCGTCGCGGCTCTCGGC
ACGGAGCAGGAGTACATCCTCAAAGACGCGGCCGCTGAGGGGCACGACGTCGTGGACTAC
AAGGACTGGTCCGTGACGCTGACCCGCCGGTTCCGCGCGCTCAAGCTATGGCTCGTGCTC
CGCTGCTATGGCGTCGAGGGCCTGCGCGACCACATCCGCGCCCATGTGCGCATGGCCGCG
TCATTCGAGGACATGGTCAAGGCCGACCCACGCTTCCAAGTCATGGCAAAGAGGCAATTC
GCACTCGTTTGCTTTAGGCTCCGGGCGCCCGAGGAGATGGGCGGCCCCAAGGCGGCCAAC
GCGCTCAACCGAAGGCTCCTAGAGGAGGTGAATGCGGCTTGCTCCGGACCCTACATGAGC
TCCGCTAATGTTGGTGGCGTCTACATGCTCAGATGCGCTATCGGGAGCACGCTTACGGAG
GAGCGACACGTCCGCGAGGCATGGACGGTTGTGCAGAACGTAGCTTCTTCCCTCCTCGCT
AAAATGGAGATGCATGAAGATTATTGA