Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027936_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:1:17973766:17975699:1 gene:Zm00001d027936 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous5 description:15-cis-phytoene desaturase chloroplastic/chromoplastic
Sequence	ATGGGGGATGTGTCCTTGAATGGACCCGTTAAGGCCGAGCCAACTGCCGGTGGCATTGCC AAGGGAAACCGAGTTCTGGACACGATGTCCGCCGGGTGGACGGACGAGAGACACATGCTG TATATAAGCTCCATGGAGGCTTCTTTCGTCGACCAGCTATACAACCATGGAAACCATCCG CAGGACGCAAATGGTGCTGGCTTCAAGGTTCTCCGCAGGGGGGTGTGGGAGTACATCGAG TATGAGAAGACCAGTGCCCCTGTGCGAAGTGGGGCTAAATGCTGCGTCCCTGCAAATCCT TGGATCCGGCATTTCAGGCCACGTGACTGCGGTAGTAACGCACAGAGTGACGCGGTCGAG GCCTCAGTGGGCGACCATGAGTCGGGTACTCAGGCAAGCCGCAAGAGCCCTTCAGTGTCT CATGGAAGGGAACGGGGAGCTTGTAAGGGAGAACCCCAGATTCTACATGAAAGTACAGAG GTCTCTGATCAAAATTTTGCTGACGATGAGGCTGAAGCTGAAACAGAATCAATGAAAGCA TGCAAGAAAAGGAGACTAAGCAGGGCTTTGCACTCCGGTGCTGAATGA

Peptide Sequence

PEP ID	Zm00001d027936_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:1:17973766:17975699:1 gene:Zm00001d027936 transcript:Zm00001d027936_T009 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous5 description:15-cis-phytoene desaturase chloroplastic/chromoplastic
Sequence	MGDVSLNGPVKAEPTAGGIAKGNRVLDTMSAGWTDERHMLYISSMEASFVDQLYNHGNHP QDANGAGFKVLRRGVWEYIEYEKTSAPVRSGAKCCVPANPWIRHFRPRDCGSNAQSDAVE ASVGDHESGTQASRKSPSVSHGRERGACKGEPQILHESTEVSDQNFADDEAEAETESMKA CKKRRLSRALHSGAE

Transcript Sequence

Transcript ID	Zm00001d027936_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:17973766:17975699:1 gene:Zm00001d027936 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:viviparous5 description:15-cis-phytoene desaturase chloroplastic/chromoplastic
Sequence	AGCCAAATCTAGGGGGCTTGCTTCATCTGCTGTCCGAGCGTGGTTTGGTTTCTCGGGGCT GGCGCGGTCAAGAGCTCACCTGAGTTCCACCGAAATCTGCCACGGTAGTTCTTGCCTAGG TGTGTCGTTGCGTTGTGACCCTTGCGGATTTTCTTGTTTCTTTTGAGTTGCGATCTTTGC AGAAAGAATATCGGAAGGGGGGATTTTTTTTTTTTTGCCTGTTCGTAGAGGAAGCAGTGA AGACATAATTGTTGCATCTGATAAAGCTCGGGCGAAATACAAGCAAATCCTTGGAATTTT GCATCCCTTTGCTGGCTCTTTTCTGATTCAGAGAACCCAATGGGGGATGTGTCCTTGAAT GGACCCGTTAAGGCCGAGCCAACTGCCGGTGGCATTGCCAAGGGAAACCGAGTTCTGGAC ACGATGTCCGCCGGGTGGACGGACGAGAGACACATGCTGTATATAAGCTCCATGGAGGCT TCTTTCGTCGACCAGCTATACAACCATGGAAACCATCCGCAGGACGCAAATGGTGCTGGC TTCAAGGTTCTCCGCAGGGGGGTGTGGGAGTACATCGAGTATGAGAAGACCAGTGCCCCT GTGCGAAGTGGGGCTAAATGCTGCGTCCCTGCAAATCCTTGGATCCGGCATTTCAGGCCA CGTGACTGCGGTAGTAACGCACAGAGTGACGCGGTCGAGGCCTCAGTGGGCGACCATGAG TCGGGTACTCAGGCAAGCCGCAAGAGCCCTTCAGTGTCTCATGGAAGGGAACGGGGAGCT TGTAAGGGAGAACCCCAGATTCTACATGAAAGTACAGAGGTCTCTGATCAAAATTTTGCT GACGATGAGGCTGAAGCTGAAACAGAATCAATGAAAGCATGCAAGAAAAGGAGACTAAGC AGGGCTTTGCACTCCGGTGCTGAATGATCAAGTAAATTCGCAGGAACAATTAGCTTAGCC TGTTGCAAGAATCGATATGATTTATCCTAAAAGAAGGTGTTAAGATGATGGGACATGGCT TTCAAAACTTTCAGCTGTTGCCTGCTGGTAGCCAAGACACACTGAATCCGAAGGAAGGCG TTGAAGGGTAGCTGTTAGTGATTTTGTGATATAAAGAGTACTGGGGCAGTTAGCATCGGC ATTTTTAGCGGATTTAAGTTCTTGTTATGTATATCTGTCTTCTGTCTTCATCAGTAGTGC TGCTTAGTACCTCACTCTCTCGTCAGCAGGATATTTCTATATATTGTCTGTACTTGGTAG ATATATGTATTGGTTGATCCTATGAGTGTAATGTTTTTTTTTGCTGCAGCTTTTGGGGGC AGTTGGTATT