Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027924_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:17775779:17777344:-1 gene:Zm00001d027924 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 179 description:AP2-EREBP transcription factor [Source:UniProtKB/TrEMBL;Acc:B4FIY3]
Sequence

ATGTGCGGGGGAGCGATCCTTGCCGAACTCATCCCAGCACGGGTGCACCGGCCGCTGACC
GCCGCCACGCTCTGGGCGGCGGCCCTGAGTGGGACCACTACCGTCGGCAAGTGGAAGGCC
GATGCAGCCGCCGCTACCGACGACGACGACGACGAAGAGTTCGAGGCCGAGTTCCAGCTT
TTCGACGACGATGACGAGTGCGAGGCCGAGTTCCAGCTTCTCGACGACCACCAACCATCT
CCCGCAGCTTCGCCTGAGGCCAGCGGCTGCAAGCGGAAGCCTGCCCTTGCTCCTCCTGCT
GGTGCCCCCGCTTCCACGGATCCGGCGACCCCGTGCTCCAGGAAGTACAGGGGCGTCCGG
TACCGCCGGTCAGGCAGGTGGGCCGCGGAGATCAGGGACCCGCGGCAGGGGCGCCGCGCC
TGGCTCGGCACGTACCGCACCGCCGAGGAGGCCGCCCTGGCGTACGACCGCGAGGCCCGC
CGGATCCGCGGGAAGAGCGCGCGGCTCAACTTCCCGCTGCTCATCCCGCACGAGGGTCCC
GGCCGTCACGCGCGCACGCCGGTGGCCATCGACCTCAACTTGCCGCCCGTCTCCGACGGT
CTCGGCGTCCCGGCTCCGGCTGGCGTCGGCGACGACGGCACGGCGAATGCCGACGGAGAT
GCAGATATGGCCAGTACTAAGACTCAGAGCACGCTAGCGCGGGTCAAGGAACTGATCGCG
CAGGGACCTCACGACGAGCGGCTGGCGGCGAGGATCGTGCCTGAGCTGATGATGCACGGG
AGCAGGGACGAGGCTGCGGCGTTGATCGCCGAGTTCAGCCGTCAGATGGAGGAGATCGCT
GCGTTGCGGAGGGACCTTGAGACACGCGAGAGGCAGCTTGTTCAGCTGGTTTCTCTAGTA
CTTCGTTGA

Peptide Sequence

PEP ID

Zm00001d027924_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:17775779:17777344:-1 gene:Zm00001d027924 transcript:Zm00001d027924_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 179 description:AP2-EREBP transcription factor [Source:UniProtKB/TrEMBL;Acc:B4FIY3]
Sequence

MCGGAILAELIPARVHRPLTAATLWAAALSGTTTVGKWKADAAAATDDDDDEEFEAEFQL
FDDDDECEAEFQLLDDHQPSPAASPEASGCKRKPALAPPAGAPASTDPATPCSRKYRGVR
YRRSGRWAAEIRDPRQGRRAWLGTYRTAEEAALAYDREARRIRGKSARLNFPLLIPHEGP
GRHARTPVAIDLNLPPVSDGLGVPAPAGVGDDGTANADGDADMASTKTQSTLARVKELIA
QGPHDERLAARIVPELMMHGSRDEAAALIAEFSRQMEEIAALRRDLETRERQLVQLVSLV
LR

Transcript Sequence

Transcript ID

Zm00001d027924_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:17775779:17777344:-1 gene:Zm00001d027924 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AP2-EREBP-transcription factor 179 description:AP2-EREBP transcription factor [Source:UniProtKB/TrEMBL;Acc:B4FIY3]
Sequence

CTATCCCTCTCTAGTCTCTACCCCCATCTGTAGTGCGGTCTGCGGCCAAGCAGAGCCCGG
GGAAACGATCGAGACGATATGTGCGGGGGAGCGATCCTTGCCGAACTCATCCCAGCACGG
GTGCACCGGCCGCTGACCGCCGCCACGCTCTGGGCGGCGGCCCTGAGTGGGACCACTACC
GTCGGCAAGTGGAAGGCCGATGCAGCCGCCGCTACCGACGACGACGACGACGAAGAGTTC
GAGGCCGAGTTCCAGCTTTTCGACGACGATGACGAGTGCGAGGCCGAGTTCCAGCTTCTC
GACGACCACCAACCATCTCCCGCAGCTTCGCCTGAGGCCAGCGGCTGCAAGCGGAAGCCT
GCCCTTGCTCCTCCTGCTGGTGCCCCCGCTTCCACGGATCCGGCGACCCCGTGCTCCAGG
AAGTACAGGGGCGTCCGGTACCGCCGGTCAGGCAGGTGGGCCGCGGAGATCAGGGACCCG
CGGCAGGGGCGCCGCGCCTGGCTCGGCACGTACCGCACCGCCGAGGAGGCCGCCCTGGCG
TACGACCGCGAGGCCCGCCGGATCCGCGGGAAGAGCGCGCGGCTCAACTTCCCGCTGCTC
ATCCCGCACGAGGGTCCCGGCCGTCACGCGCGCACGCCGGTGGCCATCGACCTCAACTTG
CCGCCCGTCTCCGACGGTCTCGGCGTCCCGGCTCCGGCTGGCGTCGGCGACGACGGCACG
GCGAATGCCGACGGAGATGCAGATATGGCCAGTACTAAGACTCAGAGCACGCTAGCGCGG
GTCAAGGAACTGATCGCGCAGGGACCTCACGACGAGCGGCTGGCGGCGAGGATCGTGCCT
GAGCTGATGATGCACGGGAGCAGGGACGAGGCTGCGGCGTTGATCGCCGAGTTCAGCCGT
CAGATGGAGGAGATCGCTGCGTTGCGGAGGGACCTTGAGACACGCGAGAGGCAGCTTGTT
CAGCTGGTTTCTCTAGTACTTCGTTGACCACTCACTCCGATGATGCATGATCTGATGACT
GTCAAGTGTGAACAATGTGTTTGTGACACTAGAACAGTCATCATCTACTGCTATAGTTAT
AGGTCCTGTTTGGTACAACTTATTTTCAGCTTCTTCACAAATTTAAGCAGAAGTTCTGCC
AAACAGTTAGCTTCTGCAGCAGCTTATCAGTTCAGCTGCTTCTCAGAATACACTAAAAGC
AGCCAATAAGCAGAAGCTGCTTTTCACCAGCTTCTCAGATAAGCTGCTTTTTCAACAAGC
ATCAGCTATGCCAAACAGGGCCATAGCCTTGTTTGCAGCTTATTTCTATAGAATTTTGCT
GGGAGGCTGGCTGTCTCGATC