Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027884_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:16707201:16714717:-1 gene:Zm00001d027884 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase PAA2 chloroplastic
Sequence	ATGGCCACCACTGCCACCATCTCCCTCCTACAGCACGTCCGACCTCCGGCTTCGGGCGGT AGTCTTCTCCCCCTTCCCCTCCAGCGCCTCCGCCCTATTCACTGCCGACGCTCGGCGCCA GCCTCCCATCACTCCCTCCATCGCAGTCTCCACCTCCGTCTCCCCACCCGCGGCGCACCC GCGGACCGGCCCCGCGCCACGGCTGACCCGTCGTCCGCGCTCGACGCGGCGGCCGGGGAG GGGGCCGCCGGTGCCACCACCGCGCTGCTCGACGTGAGCGGCATGATGTGCGGCGGCTGC GCGGCGCGGGTGCGGTCCATCCTGGCGGCGGACCCGCGGGTGGAGATGGCGGCGGTCAAC CTCCTCGCTGAGTCCGCCGCGGTGCGCTTGCGGGCGCCGGCGCCGCCGGGCGCGGGGGAG GAGCTCGCGGCCAGGCTCACGGAGTGCGGGTTCCCCGCCACGGCGCGCCGAGGGGGAGCG GCCGCGGGGGCTGGGGAGAGCGCGCGCAAGTGGAGGGAGATGGCGGCCAGGAAGGAGGAA CTCCTGGTGCGGAGCCGGGGCCGAGTCGCGTTCGCGTGGACGCTCGTCGCGCTCTGCTGC GGCTCGCACGCGTCCCACATCCTGCACTCGCTCGGTATCCATGTCGGCCACGGAACGTTT TTGGATCTGTTGCATAATCCTTATGTGAAATGTGGCATTGCTACAACTGCTTTGTTTGGG CCTGGAAGAGATATACTCTTTGATGGTTTTAGAGCATTCAAGCAAGGTTCCCCGAACATG AACTCTCTAGTAGGATTTGGATCTGCAGCTGCATTTACTATCAGTGCTGTGTCCTTGCTG AACCCTGACTGGGAGTGGAATTCAACCTTTTTTGATGAACCGGTCATGCTTCTTGGATTT GTACTTCTTGGACGATCTCTTGAAGAAAGTGCAAGGCTTAAGGCATCCAGCGATATGAAT GAGCTCATTTCACTGTTATCACCTCAGTCGAGGTTAATTGTTACTTCCTCAAGTGACAAC CCTTCTGCGGACAGTAGTTTGAATTCTGATGCGATCACAGTCGAGGTTCCTGTTGATGAT GTCCGTGTTGGAGACTCAATATTGGTCCTGCCGGGAGAGACTATACCTGTAGATGGTAAT GTCATTGAAGGATCAAGTTTTGTTGACGAATCAATGCTTACTGGAGAGTCCTTGCCTGTA GCCAAGGAGACTGGGCTTCCTGTATTTTCAGGAACTGTGAACTGGGATGGCCCGCTAAAG ATTAGAGCAACATGTACTGGACCATCATCAACAATAGCTAAGATAGTCCGCATGGTTGAG GATGCCCAAGCACGTGAAGCTCCTGTTCAAAGGCTCGCAGATTCCATCGCAGGACCATTT GTGTATACTGTTATGACGTTGGCTGCAACAACCTTTTCCTTCTGGTATTACATTGGCACA CACTTATTTCCTGAGGTTCTTCTGAATGATATTGCTGGTCCGGATGGGGATTCATTACTT TTGAGTATAAAGCTTGCTGTGGATGTATTAGTTGTTTCCTGTCCTTGTGCACTTGGATTA GCTACACCTACAGCTATCTTAATAGGAACTTCCCTAGGTGCTAAAAGAGGGTTACTGGTT AGAGGAGGTGATGTTTTAGAGCGTTTGGCTGGAATAGATACTCTTGTGCTTGATAAAACA GGGACGCTTACAGAAGGAAAACCAGTAGTGACTTCTATTGCTTCTCTGGCATATGAGGAG ACAGAGGTCCTTCGTCTTGCTGCTGCAGTGGAGAAAACAGCATTGCACCCAATTGCAAAT GCTATAATGAACAAGGCTGAACTACTCAAGTTGGATATTCCGATCACAAGTGGTCAGCTT ACATCGCCTGGATTTGGTTGTTTGGCTGAAGTAGATGGGAGTTTAGTTGCAGTGGGCACT TTGGATTGGGTGCATGATCGTTTTGAAACTAAAGCATCGCCAACTGAACTGAGAGACCTT AGAAACCGGCTGGAGTTTATGTTGTCAAGTGAAGCATCATCATCAAACCAGTCGAAGTCA ATTGCTTATGTTGGCCGTGAGGGAGAAGGAATTATAGGTGCTATTGCTATATCAGATATT TTACGAGAAGATGCAAACTTAACTGTGGAGAGGTTGCAGCAGGAAAGCATTACAACGTTC CTGCTGTCAGGGGATAGGGGAGAAGCAGTGACAAGCATTGGGAGGACCATTGGAATCAGG AATGAAAACATAAAGTCTTCCCTGACTCCGCAAGACAAAGCAAGCATTATATCAACTTTG CAAGCGAAGGGACACAGAGTTGCAATGGTTGGTGATGGAATAAACGATGCCCCGTCTTTA GCAGCCGCAGATGTTGGAATAGCCATGCGAACTCATTCAAAAGAGAACGCTGCCTCTGAT GCAGCTTCAGTTGTTCTACTAGGCAACAGACTTTCTCAGGTGGTAGATGCGCTATCCCTG TCGAAGGCAACGATGGCAAAAGTTCACCAAAATTTGGCCTGGGCAGTGGCATATAACATA GTAGCCATTCCAATTGCCGCTGGAGTGCTGCTGCCACAATATGATTTCGCCATGACACCA TCTCTCTCAGGGGGGTTGATGGCCCTTAGCTCAATCTTTGTTGTCAGCAATTCTTTGCTT CTGCAGCTGCATGGGTCGTTTCAGAACACAGAAAAACGGCAGGGTGATCTGAGCTCAAGA TTAAACTGA

Peptide Sequence

PEP ID	Zm00001d027884_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:16707201:16714717:-1 gene:Zm00001d027884 transcript:Zm00001d027884_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase PAA2 chloroplastic
Sequence	MATTATISLLQHVRPPASGGSLLPLPLQRLRPIHCRRSAPASHHSLHRSLHLRLPTRGAP ADRPRATADPSSALDAAAGEGAAGATTALLDVSGMMCGGCAARVRSILAADPRVEMAAVN LLAESAAVRLRAPAPPGAGEELAARLTECGFPATARRGGAAAGAGESARKWREMAARKEE LLVRSRGRVAFAWTLVALCCGSHASHILHSLGIHVGHGTFLDLLHNPYVKCGIATTALFG PGRDILFDGFRAFKQGSPNMNSLVGFGSAAAFTISAVSLLNPDWEWNSTFFDEPVMLLGF VLLGRSLEESARLKASSDMNELISLLSPQSRLIVTSSSDNPSADSSLNSDAITVEVPVDD VRVGDSILVLPGETIPVDGNVIEGSSFVDESMLTGESLPVAKETGLPVFSGTVNWDGPLK IRATCTGPSSTIAKIVRMVEDAQAREAPVQRLADSIAGPFVYTVMTLAATTFSFWYYIGT HLFPEVLLNDIAGPDGDSLLLSIKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGLLV RGGDVLERLAGIDTLVLDKTGTLTEGKPVVTSIASLAYEETEVLRLAAAVEKTALHPIAN AIMNKAELLKLDIPITSGQLTSPGFGCLAEVDGSLVAVGTLDWVHDRFETKASPTELRDL RNRLEFMLSSEASSSNQSKSIAYVGREGEGIIGAIAISDILREDANLTVERLQQESITTF LLSGDRGEAVTSIGRTIGIRNENIKSSLTPQDKASIISTLQAKGHRVAMVGDGINDAPSL AAADVGIAMRTHSKENAASDAASVVLLGNRLSQVVDALSLSKATMAKVHQNLAWAVAYNI VAIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHGSFQNTEKRQGDLSSR LN

Transcript Sequence

Transcript ID	Zm00001d027884_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:16707201:16714717:-1 gene:Zm00001d027884 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase PAA2 chloroplastic
Sequence	ATGGCCACCACTGCCACCATCTCCCTCCTACAGCACGTCCGACCTCCGGCTTCGGGCGGT AGTCTTCTCCCCCTTCCCCTCCAGCGCCTCCGCCCTATTCACTGCCGACGCTCGGCGCCA GCCTCCCATCACTCCCTCCATCGCAGTCTCCACCTCCGTCTCCCCACCCGCGGCGCACCC GCGGACCGGCCCCGCGCCACGGCTGACCCGTCGTCCGCGCTCGACGCGGCGGCCGGGGAG GGGGCCGCCGGTGCCACCACCGCGCTGCTCGACGTGAGCGGCATGATGTGCGGCGGCTGC GCGGCGCGGGTGCGGTCCATCCTGGCGGCGGACCCGCGGGTGGAGATGGCGGCGGTCAAC CTCCTCGCTGAGTCCGCCGCGGTGCGCTTGCGGGCGCCGGCGCCGCCGGGCGCGGGGGAG GAGCTCGCGGCCAGGCTCACGGAGTGCGGGTTCCCCGCCACGGCGCGCCGAGGGGGAGCG GCCGCGGGGGCTGGGGAGAGCGCGCGCAAGTGGAGGGAGATGGCGGCCAGGAAGGAGGAA CTCCTGGTGCGGAGCCGGGGCCGAGTCGCGTTCGCGTGGACGCTCGTCGCGCTCTGCTGC GGCTCGCACGCGTCCCACATCCTGCACTCGCTCGGTATCCATGTCGGCCACGGAACGTTT TTGGATCTGTTGCATAATCCTTATGTGAAATGTGGCATTGCTACAACTGCTTTGTTTGGG CCTGGAAGAGATATACTCTTTGATGGTTTTAGAGCATTCAAGCAAGGTTCCCCGAACATG AACTCTCTAGTAGGATTTGGATCTGCAGCTGCATTTACTATCAGTGCTGTGTCCTTGCTG AACCCTGACTGGGAGTGGAATTCAACCTTTTTTGATGAACCGGTCATGCTTCTTGGATTT GTACTTCTTGGACGATCTCTTGAAGAAAGTGCAAGGCTTAAGGCATCCAGCGATATGAAT GAGCTCATTTCACTGTTATCACCTCAGTCGAGGTTAATTGTTACTTCCTCAAGTGACAAC CCTTCTGCGGACAGTAGTTTGAATTCTGATGCGATCACAGTCGAGGTTCCTGTTGATGAT GTCCGTGTTGGAGACTCAATATTGGTCCTGCCGGGAGAGACTATACCTGTAGATGGTAAT GTCATTGAAGGATCAAGTTTTGTTGACGAATCAATGCTTACTGGAGAGTCCTTGCCTGTA GCCAAGGAGACTGGGCTTCCTGTATTTTCAGGAACTGTGAACTGGGATGGCCCGCTAAAG ATTAGAGCAACATGTACTGGACCATCATCAACAATAGCTAAGATAGTCCGCATGGTTGAG GATGCCCAAGCACGTGAAGCTCCTGTTCAAAGGCTCGCAGATTCCATCGCAGGACCATTT GTGTATACTGTTATGACGTTGGCTGCAACAACCTTTTCCTTCTGGTATTACATTGGCACA CACTTATTTCCTGAGGTTCTTCTGAATGATATTGCTGGTCCGGATGGGGATTCATTACTT TTGAGTATAAAGCTTGCTGTGGATGTATTAGTTGTTTCCTGTCCTTGTGCACTTGGATTA GCTACACCTACAGCTATCTTAATAGGAACTTCCCTAGGTGCTAAAAGAGGGTTACTGGTT AGAGGAGGTGATGTTTTAGAGCGTTTGGCTGGAATAGATACTCTTGTGCTTGATAAAACA GGGACGCTTACAGAAGGAAAACCAGTAGTGACTTCTATTGCTTCTCTGGCATATGAGGAG ACAGAGGTCCTTCGTCTTGCTGCTGCAGTGGAGAAAACAGCATTGCACCCAATTGCAAAT GCTATAATGAACAAGGCTGAACTACTCAAGTTGGATATTCCGATCACAAGTGGTCAGCTT ACATCGCCTGGATTTGGTTGTTTGGCTGAAGTAGATGGGAGTTTAGTTGCAGTGGGCACT TTGGATTGGGTGCATGATCGTTTTGAAACTAAAGCATCGCCAACTGAACTGAGAGACCTT AGAAACCGGCTGGAGTTTATGTTGTCAAGTGAAGCATCATCATCAAACCAGTCGAAGTCA ATTGCTTATGTTGGCCGTGAGGGAGAAGGAATTATAGGTGCTATTGCTATATCAGATATT TTACGAGAAGATGCAAACTTAACTGTGGAGAGGTTGCAGCAGGAAAGCATTACAACGTTC CTGCTGTCAGGGGATAGGGGAGAAGCAGTGACAAGCATTGGGAGGACCATTGGAATCAGG AATGAAAACATAAAGTCTTCCCTGACTCCGCAAGACAAAGCAAGCATTATATCAACTTTG CAAGCGAAGGGACACAGAGTTGCAATGGTTGGTGATGGAATAAACGATGCCCCGTCTTTA GCAGCCGCAGATGTTGGAATAGCCATGCGAACTCATTCAAAAGAGAACGCTGCCTCTGAT GCAGCTTCAGTTGTTCTACTAGGCAACAGACTTTCTCAGGTGGTAGATGCGCTATCCCTG TCGAAGGCAACGATGGCAAAAGTTCACCAAAATTTGGCCTGGGCAGTGGCATATAACATA GTAGCCATTCCAATTGCCGCTGGAGTGCTGCTGCCACAATATGATTTCGCCATGACACCA TCTCTCTCAGGGGGGTTGATGGCCCTTAGCTCAATCTTTGTTGTCAGCAATTCTTTGCTT CTGCAGCTGCATGGGTCGTTTCAGAACACAGAAAAACGGCAGGGTGATCTGAGCTCAAGA TTAAACTGAATTGTTGGGTTTAGTTTGACCCAGCCGAAGGACAGTGGTATTGAATTATAG AGGGTTCTGATACTGGTTTTCCAGCTCCGGCTAATTGAACTGAGTCAGAACTATAAGTAG CAAGCTATTCGTGTCAGTAGTAGCATGTTCCTGTACTGTTTGTCAACCCAACTATAGTAG CAAGTATGACCCAGAAGGACAATAATCTACCACGGCCTTCAAAAACATTGTAAATTAGTA ATGGTACTGCTGTAAGCCTGTAAACAAAGTTAAGGCGTATGACTATCGTTCATGGTCTAG CAATGTGCAACAAGCTATAAGCTTCATTTCACACA