Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027847_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:15065545:15072521:-1 gene:Zm00001d027847 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease
Sequence

ATGGTGGGACGGAAGCCGATGCGCCGGCGCCGAAGTGACCGGCAACCGCCGCCGCAATCC
TTCGGCGCCACGGCTCGCCCGAGTTCCCCACGCTCGTTCGACTCCACAACCGCCGCCGCT
GCCGCAGTTGCCACCGACCTGGACGAGCTGCTGCTGACGGCGCCGCCGCCGTCCGCGTCG
GAGCCCCGGAGCTTCTCCTATGCGGTGAAACAGCAGTGCTGGGAGAAGGCGGAGCGGCTG
CCCGGACGTGACCCGGAGAGGTGGCGCCGCGATGCGCTCGGCAACATCGTCTTCCGCAAG
CTCGTGGGTTGCCCCGGCTGCCTTTGCCACGACTACGACCACATCGTCCCCTACTCCAAG
GGCGGGAAGAGCACATTGGAGAATTGCCAAGTTTTGCAGGCTACGGTGAATCGATCTAAA
GGCAACAAGACTGAGATATCCAAATCTGAGCTCATACAGAAGAGTGCATACTGTAGGGTT
TCAGGACGGGACATGGATCTTGTTGAACTTTCTGCCTATGGAAATGTCCGGCGAGGGCCA
GATTCAGGGGGCTGCAAAATCCAATGA

Peptide Sequence

PEP ID

Zm00001d027847_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:15065545:15072521:-1 gene:Zm00001d027847 transcript:Zm00001d027847_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease
Sequence

MVGRKPMRRRRSDRQPPPQSFGATARPSSPRSFDSTTAAAAAVATDLDELLLTAPPPSAS
EPRSFSYAVKQQCWEKAERLPGRDPERWRRDALGNIVFRKLVGCPGCLCHDYDHIVPYSK
GGKSTLENCQVLQATVNRSKGNKTEISKSELIQKSAYCRVSGRDMDLVELSAYGNVRRGP
DSGGCKIQ

Transcript Sequence

Transcript ID

Zm00001d027847_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:15065545:15072521:-1 gene:Zm00001d027847 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease
Sequence

ACGGGCAGCCAGATGGGTAACATGTATATCCGCAAGGCACCCCCGAGCGGCTCATCTCAT
CGGCGACTACCAAAGAGCAATGGTGGGACGGAAGCCGATGCGCCGGCGCCGAAGTGACCG
GCAACCGCCGCCGCAATCCTTCGGCGCCACGGCTCGCCCGAGTTCCCCACGCTCGTTCGA
CTCCACAACCGCCGCCGCTGCCGCAGTTGCCACCGACCTGGACGAGCTGCTGCTGACGGC
GCCGCCGCCGTCCGCGTCGGAGCCCCGGAGCTTCTCCTATGCGGTGAAACAGCAGTGCTG
GGAGAAGGCGGAGCGGCTGCCCGGACGTGACCCGGAGAGGTGGCGCCGCGATGCGCTCGG
CAACATCGTCTTCCGCAAGCTCGTGGGTTGCCCCGGCTGCCTTTGCCACGACTACGACCA
CATCGTCCCCTACTCCAAGGGCGGGAAGAGCACATTGGAGAATTGCCAAGTTTTGCAGGC
TACGGTGAATCGATCTAAAGGCAACAAGACTGAGATATCCAAATCTGAGCTCATACAGAA
GAGTGCATACTGTAGGGTTTCAGGACGGGACATGGATCTTGTTGAACTTTCTGCCTATGG
AAATGTCCGGCGAGGGCCAGATTCAGGGGGCTGCAAAATCCAATGAAGTAGATATATCTG
AATGGCGTCAAAGTTGGAAGTAGTTGCCTCAAAGTTGGAAGTAGTTGCCTGAGGCTCAAT
GGAGAAAGCTTGATTCATTGTTCTGTCAAATATCTCCAATCATGTTTATACTATGTAGCT
TAACACTTCAAATGATTTATCCCAGAAAAGAAATCGTGATATATTTGAATCAATGATTGT
CTGCATTCATGCTCAGTAACACCAGCCCCACCTGTCCTGAAAAACTGGACTGCCAGCGAT
GTCTCTCCAGTGAAGACCACATTTACCTATCCCAGTAATGACAGGTTGATTGGGTATTTT
GTCTGGATATTGCGAGATTTGAAAACATTAACACCTGCAGGTTGTGAGTCTTAAGATGAC
TACACCAACCACCCAATGAATGTACCTTTCCTCCTACTGCAGCGCCGAGAATTGCCATCA
TGGATCATCTGGAAACACTAATGGCAGTACAAAATGTACCTAAGTTGTAGGTTCAGTTCG
TTAATGTTGTGATACTGACAGATAACTAATAAGTCGTGTGCTCAGTTTAAATGTTCTGTG
GTGGTACTGTATATTCTTATAAGTTTTGCTTTATTTTTTGTATTAATATATATATCCATT
GATTCTGTCAGTATTTCAGAAGTTTCTGCTATCGCTGCTCACATTCCAGGGATTGACTAT
CAAGGGTGGTATGTTAGTTGGGTCAACCTACTTGTGCTGGACAGGATCATTCTTTTTTGC
ATTCCATACACGGATTCAAAAACGTGGTCAGGCCAGACATGTAGAACAGTAGAAGTGCAT
TTTGCTTCAATTGTGACATCGCAATTGATCCCATTTCTCGCACTTTTCTGCATATTTTGT
TTGTAGGAGTGTGTACACGGATACTGCATTCTTTCCGCGTGAATTGACTGATCTAACATC
TGTGTCCACAAGTGTATGAGTGGATGAGGACGCATGGAGCTGTATGATATTAAGTGGCAA
CACACAGAGAAGCAATATCCGTATCAGCCATGATGATGCCAATGAATCGACAGTGACTGG
TATAATTGTGAGATTTTTCAGCATGTCCTGAAATATTTACAGTTTTATATCATCATTCAA
CTTTAACAATGACTAGATTTTCCCTGAAATCTTCACATTTTTATATAATTGTTCAACTTC
AACAATGAGTACGGTTTCATGCTTATCCTGAATCATAATGTACTGTAACAGATCTCGTGT
TTTGTGTCATTTTGAATAATAGACCTGTACTGTATTTCTGTTATTGTGTGATAGTGTGTA
CAGATGCGTGCTTTACATGTTAGCTTGTTAAGACAGTCAACTAATCATGACATATGTATT
TTTGTAAACTTAAATTTTGTTGGTTGTATTGTTGTAAACTTAATTTTTGTTGATTAACCA
AATTAGTTCGAAAGTCAGTGTTGTTGACATCCATGACACCCTGCCAGATATTTTTTGCTA
TGTGAAATTGAGATCTGAAACGACATGCTAATTATCTTAAAAAAGAAATCTACTATGGCA
TTATCCTCGGAGTTTATGCCACTAATGTGTGTTACACAGTGTTTTTATAATTGTATTGCA
GGTGTTGTAAAGTTCAGCTGAACGGTTTGGCTGACTGCCTTTTTTTTTCCATATTACTTG
ACAGGTACCAGGATTAGATAAACATGCCAACGTGTCCAAATTATAGTCAGGTCACAACCT
ACAACTTTCCAAGCCAGATTTTAGATTTGTTCCGTATCTTATGCCTGTGGAACAAACCAC
TTACAGAATTACTTTCACCATATGTTGTTCAATTCATTGCCAAGGTCATTTTAAGGACTT
GGAAGTAGCTTAAAATTGTGAAGGCAATCTGATGTCTTCAGATTAGAAACCTTCAGGGTT
CATTTTAGCTTTTGTTTTCTTTTTTATACATAGACAAGGATGTAATTAAATATTTTCCAA
TTGCATACTCTGGATTTATGCTTAAGAGTTATCTTCTTACACATTTCCTTTTTTTTAGGA
TGATGCGTCCATGGTGGATCCGTTGAAATCTCATTGTCATCTCTTTTTTTTATAGTTATG
TTAGCCATAAAATCAAATCAAAGTAGGAAGGATGAAGTGACACCAAATTTTCTATATGAC
AAGAGTATACCATAAAAACTAAAAGACAAAATTTATAGAATAATGATTAGACCTGTTATT
GGTAGAATGTTGGTCTAAAAAAGACGACAGATAAGTATTGTGAAAGTACATATTTTACGT
TGCATTTATGGTCATAAAAAGCAACCAAGTCCTAAATTATGATATACATGATAGGTTAGA
GATAGCATCAATTAAAAAAAGTTTGTCCAATATTGATTGAGATTGTTTGAATATGTCCGA
CGAAGACCTTTAGAGACATCAATGAATAGTTAGATCTTAAGACGCGATATTAATGGTAAG
AAAGGTAGAAAAAGACCAAACATAATATGAGAAG