Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027807_T025
CDS Infomation

cds chromosome:B73_RefGen_v4:1:14019400:14030517:-1 gene:Zm00001d027807 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase-related protein
Sequence

ATGCTGCTCTTCGACGCTGCCACCGACTCCCGCGCCTACGATGAGGTCGTCGCTGAGTGC
GAGCGCGGCCTCAGCATCGAGGCCCCCTCCGACCCCGCGCCCCACTCCCTCAGGTTGCCC
GGCCCCGACGTCGACCAGGTCCAGTCCGAGCTCCGCAACTTGATCCAGAAGGCCAACCTC
GCCTCCATCTCCTCTTGGGTCAAAAACATGGGCGGCGCGGGGGACGACAAGCTTCGCCTC
ATCCCTGTGCGCCGTCTAGCGGACGAGCCAATGGAGGCCCGGCTTGTCCCCACGGCGCCC
TCCCCGCGCCGCCCAAACGAGATCAAGAAGGCGACCAAGACCACCGAGGAGCGCCGCCAG
GAGATCGAGGTACGCCTGGCTGCCATGAGGCTGCTGCAGCAGCAGAAGGAGCAGAGCAAT
GATGTTGTGTCTGCTACCCCTGCCTCTTCCCGGTCACATGGAGATGATGCCCCCTCATCG
TCTGAGTCATCGGTGGGCGGACATCGAGCTGACCGGAGAAAAGGTGGGTCTAGGAAAGCA
ACAGGCTCATCCGCGTCTGAGCGCACTGACCAGGTGCGTGCCTACTGGGGCTCGATACCA
GTGGAGCAAAGGCTTGCATTCTTAAACACTAGCATTTCTGAGCTCAAGTCACACTATGCT
TCTGCAATGCACAAGGAGAAAGATGCTGCCAGTGCAGCATCTGATGTGCTCAATGAGGTG
ATACAATTTGCCAACAAGCATGACAAGTGGGAGTTCATGGTATGTGGTAGGTGTCGGGAG
CAGTTTACACATGTGGAGGCACACCGGTGGCATGTCATGGTTGAGCATGTTGGGCTACTC
TCATCCGAGCTGCAGGAAATGGTTCCGCAGGAGATTGATGCTGACTGGGCAGAAATGCTC
AGTGGTTGCAACTGGAGGCCATTGGATGCTACTGCCGCACTGAAACTTTTTGAGGAAGAT
CAACACAACAACCTTGGACCAGATAGGGAGGATGAATCGAATTCGTTAGATAGTTGGAGT
AACAAAGCCATGGACATGTCAGAATCCTCAGCCTGGTCACACAACGAGGAGTCTAGCGGT
TTTGGAGTGGTGGTGAGGGAAGGTGACACCAAGTGGCCATTCTCAGATGATGACGAAAGG
GCCAAGATTTTAGAAAGAATCCATTCATCGTTCAAAATCCTTGTGAAGAACCATAATCTT
TCAGTGCACAATCTAAACAGGGTGATTCGATTTGCTGTAGAGGAACTCAGGGGGTTGCCA
TCTGGGTCACTACTGCTTAATCACTCTTTGGACGAGTCGCCACTTTGCATTCGCTTCTTG
GAGGCATCATCACTGCAGAAAGTAGATAATTTCTTGCAGGACTTAATGCAGGCTTCTGGA
CTTAATAGGAACTTACAGAAGGCTGAAGGATTAGGTGACGGGGATAGTTTCATCCAAAAC
CACGATGTACTAGAGAAGGTTACCCTTAATTCTGATTCATCAGAACTGATCATTGATGGG
CACACCTTCGGCGGAAAGTTTGATTCCGAGAGTGTTGATACTGATGCATTGCTTTCATGG
CTGTACGCCGGATCTTCAATTGGTGAGCAGCTATTGGCCTGGAATCGTATGATCGACGAA
AGGTCAAATCAGTGCGTCGACCTTATTCGAGCACTTGGGAGGGAGTTCAACAACCTGCAA
AACTCATGTGAACGGAAACTTGAACAGCTGAGAAATGAGGATGCCTTTACTTCTGTGGAG
GGCCTCTTTTGTGAAGAGCAAACACGAAGGGAGCAGGTGGGACGGTATGGATTCCAAACT
TTCGAGGAGCTCCTCAGGAAGCGGCAGGAGTTTTTGGAACACAACACTGAGGAGCAGTCC
GACAGTAACAGATCTGAGATAGATGCAATCTCAGCTATTTTGAAGGAACTTCACACATCA
CACTTTGGTTATGATGAGGCCCTTACTGGCATGGCCCCACGCTTTTCTGACTTCGATGGG
GGCGAAGAAGATGAATGGAGGCTGCATGATTTTATACATCCAAATGATTCAATGGTACAC
ATGGTTGTATCAAAGATGAAGGAACATGTTACTATGGAGATTAGCAAGATAGATGCTAAG
ATTATGCGAACTTTATCTGTGATGCGGCAACTAGAGCACAAGCTTGGACCTGTTTCTGCT
CTTGATTATCGAATGATTCTTTTACCCCTTATGAGGTCGTTCTTGCAGAGCCATTTGGAA
GAGCTGGTGGATAAGGATGCGAGAGAGAGATCTGATGCTGCAAGGGAAGCCTTCTTGGCT
GAACTTGCTTTGGATGCTAAGAAGAATGCAAGCAAAGGGGGTGATATGAAACAATCCCAT
GAAAAATCAAAGGATAAGAAGAAGTTTAAGGATTCTCGTAGGGCAAAGGAGTTCAAGGAT
TCAAGCTGGAGCGACCAGTCTCTCATTCACCAAGACAGTGCTGACGAGGAAACAACAGAG
ACATTTCAAATTCTTGCTGATTGTGATGATCTGGATTGCAAATTCTCCACAAGTGATGAT
TACTTCAATGAACAAGAGGAAGAACTTAGGCATAAGGTACAACTTGAAGCAGAGGAACGA
AAGCTGGAAGAGACTCTGGAATATCAACGGCGGATAGAGGAGGAAGCAAAGCAGAAACAT
CTTGCAGAACAATGTAGAAGTACTTATGCATCTTCTGTAATTGGTACAGCTCGTCTTTCA
AGCACTGGGAATCAGGATAACCATGAAAGTGCAATCAATCACTCTTCCCGTACTTATCTC
GAAGGCATAAAGTTTGGTGATTTTCGCTACACCGAGAACAATTTCAGCCAGAAACTTAAT
GGATTGGATTCATCTGATGCACATGCATTAACCAGCAGTGATATGAATGCTCCTAGATGG

Peptide Sequence

PEP ID

Zm00001d027807_P025
PEP Infomation

pep chromosome:B73_RefGen_v4:1:14019400:14030517:-1 gene:Zm00001d027807 transcript:Zm00001d027807_T025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase-related protein
Sequence

MLLFDAATDSRAYDEVVAECERGLSIEAPSDPAPHSLRLPGPDVDQVQSELRNLIQKANL
ASISSWVKNMGGAGDDKLRLIPVRRLADEPMEARLVPTAPSPRRPNEIKKATKTTEERRQ
EIEVRLAAMRLLQQQKEQSNDVVSATPASSRSHGDDAPSSSESSVGGHRADRRKGGSRKA
TGSSASERTDQVRAYWGSIPVEQRLAFLNTSISELKSHYASAMHKEKDAASAASDVLNEV
IQFANKHDKWEFMVCGRCREQFTHVEAHRWHVMVEHVGLLSSELQEMVPQEIDADWAEML
SGCNWRPLDATAALKLFEEDQHNNLGPDREDESNSLDSWSNKAMDMSESSAWSHNEESSG
FGVVVREGDTKWPFSDDDERAKILERIHSSFKILVKNHNLSVHNLNRVIRFAVEELRGLP
SGSLLLNHSLDESPLCIRFLEASSLQKVDNFLQDLMQASGLNRNLQKAEGLGDGDSFIQN
HDVLEKVTLNSDSSELIIDGHTFGGKFDSESVDTDALLSWLYAGSSIGEQLLAWNRMIDE
RSNQCVDLIRALGREFNNLQNSCERKLEQLRNEDAFTSVEGLFCEEQTRREQVGRYGFQT
FEELLRKRQEFLEHNTEEQSDSNRSEIDAISAILKELHTSHFGYDEALTGMAPRFSDFDG
GEEDEWRLHDFIHPNDSMVHMVVSKMKEHVTMEISKIDAKIMRTLSVMRQLEHKLGPVSA
LDYRMILLPLMRSFLQSHLEELVDKDARERSDAAREAFLAELALDAKKNASKGGDMKQSH
EKSKDKKKFKDSRRAKEFKDSSWSDQSLIHQDSADEETTETFQILADCDDLDCKFSTSDD
YFNEQEEELRHKVQLEAEERKLEETLEYQRRIEEEAKQKHLAEQCRSTYASSVIGTARLS
STGNQDNHESAINHSSRTYLEGIKFGDFRYTENNFSQKLNGLDSSDAHALTSSDMNAPRW

Transcript Sequence

Transcript ID

Zm00001d027807_T025
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:14019400:14030517:-1 gene:Zm00001d027807 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase-related protein
Sequence

GAGGTCGACAAAGCGCTTGCGTGCCTGCAGCGGGGCAGCCACGCGCGTGCGCAGCGCCTC
ACGAGGGACGCCATCGCCCGCCACGGGGAGGCCTCACCGCTGCTCCTGCGGGCGCACGGC
ACCGTCCACGCTCGCGCCGCCTCCGTCCTCGACGACCACGCCAGCCGCGCGCGCCACCAG
CGTACAGCGCTCCAGGCGGCCCAGCGCGCCGTCCAGCTCGCGCCGGACTCCATCGAGCTG
GCCCACTTCCACGCCATGCTGCTCTTCGACGCTGCCACCGACTCCCGCGCCTACGATGAG
GTCGTCGCTGAGTGCGAGCGCGGCCTCAGCATCGAGGCCCCCTCCGACCCCGCGCCCCAC
TCCCTCAGGTTGCCCGGCCCCGACGTCGACCAGGTCCAGTCCGAGCTCCGCAACTTGATC
CAGAAGGCCAACCTCGCCTCCATCTCCTCTTGGGTCAAAAACATGGGCGGCGCGGGGGAC
GACAAGCTTCGCCTCATCCCTGTGCGCCGTCTAGCGGACGAGCCAATGGAGGCCCGGCTT
GTCCCCACGGCGCCCTCCCCGCGCCGCCCAAACGAGATCAAGAAGGCGACCAAGACCACC
GAGGAGCGCCGCCAGGAGATCGAGGTACGCCTGGCTGCCATGAGGCTGCTGCAGCAGCAG
AAGGAGCAGAGCAATGATGTTGTGTCTGCTACCCCTGCCTCTTCCCGGTCACATGGAGAT
GATGCCCCCTCATCGTCTGAGTCATCGGTGGGCGGACATCGAGCTGACCGGAGAAAAGGT
GGGTCTAGGAAAGCAACAGGCTCATCCGCGTCTGAGCGCACTGACCAGGTGCGTGCCTAC
TGGGGCTCGATACCAGTGGAGCAAAGGCTTGCATTCTTAAACACTAGCATTTCTGAGCTC
AAGTCACACTATGCTTCTGCAATGCACAAGGAGAAAGATGCTGCCAGTGCAGCATCTGAT
GTGCTCAATGAGGTGATACAATTTGCCAACAAGCATGACAAGTGGGAGTTCATGGTATGT
GGTAGGTGTCGGGAGCAGTTTACACATGTGGAGGCACACCGGTGGCATGTCATGGTTGAG
CATGTTGGGCTACTCTCATCCGAGCTGCAGGAAATGGTTCCGCAGGAGATTGATGCTGAC
TGGGCAGAAATGCTCAGTGGTTGCAACTGGAGGCCATTGGATGCTACTGCCGCACTGAAA
CTTTTTGAGGAAGATCAACACAACAACCTTGGACCAGATAGGGAGGATGAATCGAATTCG
TTAGATAGTTGGAGTAACAAAGCCATGGACATGTCAGAATCCTCAGCCTGGTCACACAAC
GAGGAGTCTAGCGGTTTTGGAGTGGTGGTGAGGGAAGGTGACACCAAGTGGCCATTCTCA
GATGATGACGAAAGGGCCAAGATTTTAGAAAGAATCCATTCATCGTTCAAAATCCTTGTG
AAGAACCATAATCTTTCAGTGCACAATCTAAACAGGGTGATTCGATTTGCTGTAGAGGAA
CTCAGGGGGTTGCCATCTGGGTCACTACTGCTTAATCACTCTTTGGACGAGTCGCCACTT
TGCATTCGCTTCTTGGAGGCATCATCACTGCAGAAAGTAGATAATTTCTTGCAGGACTTA
ATGCAGGCTTCTGGACTTAATAGGAACTTACAGAAGGCTGAAGGATTAGGTGACGGGGAT
AGTTTCATCCAAAACCACGATGTACTAGAGAAGGTTACCCTTAATTCTGATTCATCAGAA
CTGATCATTGATGGGCACACCTTCGGCGGAAAGTTTGATTCCGAGAGTGTTGATACTGAT
GCATTGCTTTCATGGCTGTACGCCGGATCTTCAATTGGTGAGCAGCTATTGGCCTGGAAT
CGTATGATCGACGAAAGGTCAAATCAGTGCGTCGACCTTATTCGAGCACTTGGGAGGGAG
TTCAACAACCTGCAAAACTCATGTGAACGGAAACTTGAACAGCTGAGAAATGAGGATGCC
TTTACTTCTGTGGAGGGCCTCTTTTGTGAAGAGCAAACACGAAGGGAGCAGGTGGGACGG
TATGGATTCCAAACTTTCGAGGAGCTCCTCAGGAAGCGGCAGGAGTTTTTGGAACACAAC
ACTGAGGAGCAGTCCGACAGTAACAGATCTGAGATAGATGCAATCTCAGCTATTTTGAAG
GAACTTCACACATCACACTTTGGTTATGATGAGGCCCTTACTGGCATGGCCCCACGCTTT
TCTGACTTCGATGGGGGCGAAGAAGATGAATGGAGGCTGCATGATTTTATACATCCAAAT
GATTCAATGGTACACATGGTTGTATCAAAGATGAAGGAACATGTTACTATGGAGATTAGC
AAGATAGATGCTAAGATTATGCGAACTTTATCTGTGATGCGGCAACTAGAGCACAAGCTT
GGACCTGTTTCTGCTCTTGATTATCGAATGATTCTTTTACCCCTTATGAGGTCGTTCTTG
CAGAGCCATTTGGAAGAGCTGGTGGATAAGGATGCGAGAGAGAGATCTGATGCTGCAAGG
GAAGCCTTCTTGGCTGAACTTGCTTTGGATGCTAAGAAGAATGCAAGCAAAGGGGGTGAT
ATGAAACAATCCCATGAAAAATCAAAGGATAAGAAGAAGTTTAAGGATTCTCGTAGGGCA
AAGGAGTTCAAGGATTCAAGCTGGAGCGACCAGTCTCTCATTCACCAAGACAGTGCTGAC
GAGGAAACAACAGAGACATTTCAAATTCTTGCTGATTGTGATGATCTGGATTGCAAATTC
TCCACAAGTGATGATTACTTCAATGAACAAGAGGAAGAACTTAGGCATAAGGTACAACTT
GAAGCAGAGGAACGAAAGCTGGAAGAGACTCTGGAATATCAACGGCGGATAGAGGAGGAA
GCAAAGCAGAAACATCTTGCAGAACAATGTAGAAGTACTTATGCATCTTCTGTAATTGGT
ACAGCTCGTCTTTCAAGCACTGGGAATCAGGATAACCATGAAAGTGCAATCAATCACTCT
TCCCGTACTTATCTCGAAGGCATAAAGTTTGGTGATTTTCGCTACACCGAGAACAATTTC
AGCCAGAAACTTAATGGATTGGATTCATCTGATGCACATGCATTAACCAGCAGTGATATG
AATGCTCCTAGATGGAC