Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027767_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:13143086:13145452:1 gene:Zm00001d027767 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCTGACCCCGTGCGATTGCTTTCTCCATGTCCCCGCCCATCCACGGCCGAGTCTTAAA GCTCCGGCGCCCTGGAGAGACAATGTTCTCAGCTTCCAGATAAACACAGTCTCTGCGCCA GATAGGACTGTTGAAATTTGCCCAGATTTGGTAGTTCCATGCACGGTTTCCAAACGGGCT GTCAGAGGGAGGAAGAAGAAAGGCAACTGGGTCCATTACGGTGGGTTGCTTCCGGCAATG CTGGAGACACTAGAGGATGTTCGGGATGTTGGGGAAGCGCTCTGGGCGTGGAAGGACACC CTGAGCAACAGGGAGAAGACTATCATCCTCAAGGAGCAGAAAGATTGGCGACGGGCAGTC GAAATCTTTGACTGGTTTCGCAGGGAGCAAGGCCATGAGCTTAATGTGATTCACTACAAT GTCGTGCTCAATACAGTTGGGAAGGCAAGGAGGTGGGACCTCGTTCTTAGGCTGTGGTAT GAGATGCATTCCTTTGGCGTGGCTCCGGACAACTCAACATATGGTACGCTGATCAATGTC TGTTGTCAAGGCGGAAGAGAATGGACGGCTTTGCTTTGGCTTGGGGACATGTGCAAGCGT GGTCTGATGCCTGATGAGGTCACTATGAGTATTGTGATGCAGGCACATAAGAAGGCTGGA GAGTATGAAACAGCTGAGATTTTCTTTGAAAGGTGGTCCTCAGATTCAATCAGAAGGATG GAGGGACGTTCTCACTACAACCTATATACTTACAACACCTTGATTGATACTTATGGAAAG GCTGGTCATCTTGAGAAAGTATCAGATACATTCAACCAAATGTTGAGCGAAGGTGTTGCA CCAAGCGTTGTTACATTTAACTCAATGATTCATGCTTGGGGTAAGCACCACCGAATGGAG AAAGTTGCTTCTTTGGTTCGAATGATGGAGGAATTCCAGTGCTTTCCTGACACCAGGACT TACAATATACTGATCGCACTTTACAGAGAAAGCGATGATATTGATATTGCAGAGTACTAC TACTGGAAGATGAAAACAGAAAACTTGGTACCAGATGTTGTGAGCTGCCGCACGCTCTTA TATGGATACTCTATCAGGGGCATGGTCACTAAAGCGGAAGCCCTTCTGAAGGAAATGGAT GAGAGGGGCTTCATGGTAGATGAATACACACAATCAGCTTTGACAAGGATGTATGTAAAT GTTGGGATGCTTGAACAAGCTTGGCGTTGGTTTGACAGGTTCCACCACCATATGAATTCT GAATGCTTTTCTGCAAATATTGATGCTTTTGGAGAGAAAGGATACATAGTTCTTGCAGAG AAGGCTTTTGTATGTTGCCTAAAGAAGAAGATGATCAGTGTTTCTGCATGCAATGTTATG ATCAAAGCATATGGGTTGGTAGGGATGCTTGATGAGGCATGCGAGATAGCTAATGGCATG GAGAGGTATGACATTTTGCCTGATTATGTGACATACACTTCTCTCATTCAACTTCTGTCA ACTGCTAAACTGCCAAAGAAGGCTATTTACTACTTAGAAAAAATGAAAGTTGTGAAATTG CTGTCAGATTGTATCCCATACTCTGTGGTAATTAGTAGCTTTGCTAAGAATGGTGATCTA CGAATGTCCGAATACCTATTTAGAGAAATGATCATGTCAGGGGTCCGTCCTGATATTTTT GTCTACTCTATCTTAATTGATGCATACGCTGAAGTTGGAAATGTCCAACAAGCTTCAGCA TATTTTGGTTTAATGAAAAAGGATGGTTTATATGAGAATGTTACAATCTACAATTCTTTG ATAAAGCTCTACACAAAAGTAGGGTATGTGCCAGAGGCCCGAGGAGCATATAAGTTACTC AAATCATTGGATACCAATGCCATCCTTTATGCATCTAATTGCATGATTGATCTCTATAGT GATCATTGTATGGTGAAGGAAGCATGTGAGGTTTTTGACAGTTTGAAAGTTAGGGGAATT GCCAATGAATTCTCACATGCAATGATGGTGTGTATGTACAAGAAAGTTGGTCGCTATGAT GTGGCTCACAGGGTTTGCAAGGAAATGCAAGCTTTAGGACTTCTAACTCAGTTACTAAGC TACAATTCTGTAATCCAAATGTATGTGTCTGGTGGAAGAACGGAGGAGGCTCTTAAAATA TTCAAGAAGATGTTGGCATCGAACACACCACCAAATGATGCAACATTCCAGGCACTAAAG GTTATTCTAGTAAGAAGTGGAGTCACAAAGAATGAGACAAGAAAGTTAGAATTGTTAAGA AGAAATAACAGTCATGATTGCTTGCATCAGTGGTACAGGGCAATATCTTCAGCTGTAAGA TCAAATGCAAATTCTTTTCAAACATAA

Peptide Sequence

PEP ID	Zm00001d027767_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:13143086:13145452:1 gene:Zm00001d027767 transcript:Zm00001d027767_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MLTPCDCFLHVPAHPRPSLKAPAPWRDNVLSFQINTVSAPDRTVEICPDLVVPCTVSKRA VRGRKKKGNWVHYGGLLPAMLETLEDVRDVGEALWAWKDTLSNREKTIILKEQKDWRRAV EIFDWFRREQGHELNVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGVAPDNSTYGTLINV CCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEIFFERWSSDSIRRM EGRSHYNLYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRME KVASLVRMMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCRTLL YGYSIRGMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNS ECFSANIDAFGEKGYIVLAEKAFVCCLKKKMISVSACNVMIKAYGLVGMLDEACEIANGM ERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDL RMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSL IKLYTKVGYVPEARGAYKLLKSLDTNAILYASNCMIDLYSDHCMVKEACEVFDSLKVRGI ANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGLLTQLLSYNSVIQMYVSGGRTEEALKI FKKMLASNTPPNDATFQALKVILVRSGVTKNETRKLELLRRNNSHDCLHQWYRAISSAVR SNANSFQT

Transcript Sequence

Transcript ID	Zm00001d027767_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:13143086:13145452:1 gene:Zm00001d027767 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCTGACCCCGTGCGATTGCTTTCTCCATGTCCCCGCCCATCCACGGCCGAGTCTTAAA GCTCCGGCGCCCTGGAGAGACAATGTTCTCAGCTTCCAGATAAACACAGTCTCTGCGCCA GATAGGACTGTTGAAATTTGCCCAGATTTGGTAGTTCCATGCACGGTTTCCAAACGGGCT GTCAGAGGGAGGAAGAAGAAAGGCAACTGGGTCCATTACGGTGGGTTGCTTCCGGCAATG CTGGAGACACTAGAGGATGTTCGGGATGTTGGGGAAGCGCTCTGGGCGTGGAAGGACACC CTGAGCAACAGGGAGAAGACTATCATCCTCAAGGAGCAGAAAGATTGGCGACGGGCAGTC GAAATCTTTGACTGGTTTCGCAGGGAGCAAGGCCATGAGCTTAATGTGATTCACTACAAT GTCGTGCTCAATACAGTTGGGAAGGCAAGGAGGTGGGACCTCGTTCTTAGGCTGTGGTAT GAGATGCATTCCTTTGGCGTGGCTCCGGACAACTCAACATATGGTACGCTGATCAATGTC TGTTGTCAAGGCGGAAGAGAATGGACGGCTTTGCTTTGGCTTGGGGACATGTGCAAGCGT GGTCTGATGCCTGATGAGGTCACTATGAGTATTGTGATGCAGGCACATAAGAAGGCTGGA GAGTATGAAACAGCTGAGATTTTCTTTGAAAGGTGGTCCTCAGATTCAATCAGAAGGATG GAGGGACGTTCTCACTACAACCTATATACTTACAACACCTTGATTGATACTTATGGAAAG GCTGGTCATCTTGAGAAAGTATCAGATACATTCAACCAAATGTTGAGCGAAGGTGTTGCA CCAAGCGTTGTTACATTTAACTCAATGATTCATGCTTGGGGTAAGCACCACCGAATGGAG AAAGTTGCTTCTTTGGTTCGAATGATGGAGGAATTCCAGTGCTTTCCTGACACCAGGACT TACAATATACTGATCGCACTTTACAGAGAAAGCGATGATATTGATATTGCAGAGTACTAC TACTGGAAGATGAAAACAGAAAACTTGGTACCAGATGTTGTGAGCTGCCGCACGCTCTTA TATGGATACTCTATCAGGGGCATGGTCACTAAAGCGGAAGCCCTTCTGAAGGAAATGGAT GAGAGGGGCTTCATGGTAGATGAATACACACAATCAGCTTTGACAAGGATGTATGTAAAT GTTGGGATGCTTGAACAAGCTTGGCGTTGGTTTGACAGGTTCCACCACCATATGAATTCT GAATGCTTTTCTGCAAATATTGATGCTTTTGGAGAGAAAGGATACATAGTTCTTGCAGAG AAGGCTTTTGTATGTTGCCTAAAGAAGAAGATGATCAGTGTTTCTGCATGCAATGTTATG ATCAAAGCATATGGGTTGGTAGGGATGCTTGATGAGGCATGCGAGATAGCTAATGGCATG GAGAGGTATGACATTTTGCCTGATTATGTGACATACACTTCTCTCATTCAACTTCTGTCA ACTGCTAAACTGCCAAAGAAGGCTATTTACTACTTAGAAAAAATGAAAGTTGTGAAATTG CTGTCAGATTGTATCCCATACTCTGTGGTAATTAGTAGCTTTGCTAAGAATGGTGATCTA CGAATGTCCGAATACCTATTTAGAGAAATGATCATGTCAGGGGTCCGTCCTGATATTTTT GTCTACTCTATCTTAATTGATGCATACGCTGAAGTTGGAAATGTCCAACAAGCTTCAGCA TATTTTGGTTTAATGAAAAAGGATGGTTTATATGAGAATGTTACAATCTACAATTCTTTG ATAAAGCTCTACACAAAAGTAGGGTATGTGCCAGAGGCCCGAGGAGCATATAAGTTACTC AAATCATTGGATACCAATGCCATCCTTTATGCATCTAATTGCATGATTGATCTCTATAGT GATCATTGTATGGTGAAGGAAGCATGTGAGGTTTTTGACAGTTTGAAAGTTAGGGGAATT GCCAATGAATTCTCACATGCAATGATGGTGTGTATGTACAAGAAAGTTGGTCGCTATGAT GTGGCTCACAGGGTTTGCAAGGAAATGCAAGCTTTAGGACTTCTAACTCAGTTACTAAGC TACAATTCTGTAATCCAAATGTATGTGTCTGGTGGAAGAACGGAGGAGGCTCTTAAAATA TTCAAGAAGATGTTGGCATCGAACACACCACCAAATGATGCAACATTCCAGGCACTAAAG GTTATTCTAGTAAGAAGTGGAGTCACAAAGAATGAGACAAGAAAGTTAGAATTGTTAAGA AGAAATAACAGTCATGATTGCTTGCATCAGTGGTACAGGGCAATATCTTCAGCTGTAAGA TCAAATGCAAATTCTTTTCAAACATAA