Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027711_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:11719874:11725095:-1 gene:Zm00001d027711 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 7
Sequence	ATGGCCCGCACCGCGGCGCCGGCCGCGGGCTACGGAGAGGACGGAGTGTACCGCTCCCCG CGCCCGGCCGTGCGCATCGAGTCCGACACAGGCCTCTCCCTCAACGACCTCCTCTTCCGC CGCGCCGACGTGTGCCCCTCCGCTCTCGCGCTGGTCGACTCCGCCACCGGCCAATCCCTC ACCTTCGCCGCCTTTCGCTCCGCCGTCCTCACCACGGCCGTCGCCCTCTCCTCGCGCGCG GGCGTCCGGCGCGGCGACGTCGTCCTCTTCTTCGCCCCCAACTGCTTCCTCTACCCCGTC TGCTTCTTCGCCGTCACCGCCCTCGGCGCCGTCGCTACCACGGCCAACCCCCTCTACACC CCTCGGGAGGTCGCTAAACAGGCCACCGACTCGCGGGCCAAGCTCGCAATCACGGTCTCT GAACTCCTTCCCAAAATCGTGGACCTCGGCTTCCCCACCATCCTGCTCGACGGCGGCGGC GACGGCGACGCGGCCAGTGCCGCCGCCTCCAAGCCTCAGGGAGCCAGCGTGACGCTTTAC TCAGACCTCGTTTCCGGGGCGCGGGAGACGGAGTACCGCCGCCCGCCGACGAAGCAGAGC GACACGACCGCGCTGATGTACTCGTCCGGCACGACGGGGGCGAGCAAGGGCGTAATCCTG ACACACCGCAACTTCATCTCGGCGGCGGCCATGATGACAGCGGACCAGGACGCGCTCGGA GAGGGGCCCAACGTCTTCCTCTGCTTCCTGCCCATGTTCCACATCTTCGGCTTGTCCGTC ATCACGTTCGCGCAGATGCAGCGTGGCAATTCCGTCGTCGTGATGTCGCGGTTTGACATG GACTCTGTGATGGCCGCGGTGCAGCGGCACCGTGTCACTCACCTCTTCTGCGTGCCGCCG GTCATGATAGCGCTCGCCAAGCTCGGGAGCGTTGGGAAATATGACCTCAGCTCGCTCAGG TTCATCGGCTCTGGCGCAGCACCGCTCGGCAAGGACGTGATGGAGGGAGTGGCCAAGAAT TTTCCAGAAGCTGTGATTGCCCAGGGTTACGGAATGACTGAAACTTGTGGGATCATATCT TTAGAGTACCCAGAAAAAGGACAAATTCGTCAATTTGGTTCAACTGGAGCACTTGTCTCA GGAGTTGAAGCAAAAATTGTTGATGTAGAAACATTGATATGTCTGCCACCAAATCAACTA GGAGAAATTTGTGTTCGAGGACCGAACATAATGCAAGGGTATTTCAACAATGTGCAAGCT ACTGAATTTACAATCAAGCAAGGGTGGTTGCATACTGGTGATATTGGATACTTTGATGAG GGAGGTCAGCTTTTCGTAGTTGATAGACTTAAAGAACTGATTAAGTACAAAGGTTTTCAG ATTGCACCTGCCGAGCTTGAAGGGCTACTTCTGTCTCATCCAGAAATTCTGGATGCTGTT GTTATCCCGTTCCCCGATGCTGAAGCTGGTGAAGTTCCTATTGCTTACGTCGTAAGGTCC TCTGAGAGTTCTTTGACTGAAGTTGATGTCCAGAAATTTATTGAAAAGCAGGTCGCATAC TACAAAAAATTGAGGAGGGTGACCTTTGTGGACAGCGTACCAAAATCTGCTTCAGGGAAG ATCTTGAGAAGAGAACTCATCTCTAAAGTCAGATCATCCAAGCTATAG

Peptide Sequence

PEP ID	Zm00001d027711_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:11719874:11725095:-1 gene:Zm00001d027711 transcript:Zm00001d027711_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 7
Sequence	MARTAAPAAGYGEDGVYRSPRPAVRIESDTGLSLNDLLFRRADVCPSALALVDSATGQSL TFAAFRSAVLTTAVALSSRAGVRRGDVVLFFAPNCFLYPVCFFAVTALGAVATTANPLYT PREVAKQATDSRAKLAITVSELLPKIVDLGFPTILLDGGGDGDAASAAASKPQGASVTLY SDLVSGARETEYRRPPTKQSDTTALMYSSGTTGASKGVILTHRNFISAAAMMTADQDALG EGPNVFLCFLPMFHIFGLSVITFAQMQRGNSVVVMSRFDMDSVMAAVQRHRVTHLFCVPP VMIALAKLGSVGKYDLSSLRFIGSGAAPLGKDVMEGVAKNFPEAVIAQGYGMTETCGIIS LEYPEKGQIRQFGSTGALVSGVEAKIVDVETLICLPPNQLGEICVRGPNIMQGYFNNVQA TEFTIKQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAV VIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGK ILRRELISKVRSSKL

Transcript Sequence

Transcript ID	Zm00001d027711_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:11719874:11725095:-1 gene:Zm00001d027711 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 7
Sequence	CCCCAGTCCCCACGCAGGCCGCTCTGTTCTGCCAGCAGTTGGCACAAGCAGCTTGGGCGC AAAAGAACAACTGCGATCGAGCAAGGGACAATGGCCCGCACCGCGGCGCCGGCCGCGGGC TACGGAGAGGACGGAGTGTACCGCTCCCCGCGCCCGGCCGTGCGCATCGAGTCCGACACA GGCCTCTCCCTCAACGACCTCCTCTTCCGCCGCGCCGACGTGTGCCCCTCCGCTCTCGCG CTGGTCGACTCCGCCACCGGCCAATCCCTCACCTTCGCCGCCTTTCGCTCCGCCGTCCTC ACCACGGCCGTCGCCCTCTCCTCGCGCGCGGGCGTCCGGCGCGGCGACGTCGTCCTCTTC TTCGCCCCCAACTGCTTCCTCTACCCCGTCTGCTTCTTCGCCGTCACCGCCCTCGGCGCC GTCGCTACCACGGCCAACCCCCTCTACACCCCTCGGGAGGTCGCTAAACAGGCCACCGAC TCGCGGGCCAAGCTCGCAATCACGGTCTCTGAACTCCTTCCCAAAATCGTGGACCTCGGC TTCCCCACCATCCTGCTCGACGGCGGCGGCGACGGCGACGCGGCCAGTGCCGCCGCCTCC AAGCCTCAGGGAGCCAGCGTGACGCTTTACTCAGACCTCGTTTCCGGGGCGCGGGAGACG GAGTACCGCCGCCCGCCGACGAAGCAGAGCGACACGACCGCGCTGATGTACTCGTCCGGC ACGACGGGGGCGAGCAAGGGCGTAATCCTGACACACCGCAACTTCATCTCGGCGGCGGCC ATGATGACAGCGGACCAGGACGCGCTCGGAGAGGGGCCCAACGTCTTCCTCTGCTTCCTG CCCATGTTCCACATCTTCGGCTTGTCCGTCATCACGTTCGCGCAGATGCAGCGTGGCAAT TCCGTCGTCGTGATGTCGCGGTTTGACATGGACTCTGTGATGGCCGCGGTGCAGCGGCAC CGTGTCACTCACCTCTTCTGCGTGCCGCCGGTCATGATAGCGCTCGCCAAGCTCGGGAGC GTTGGGAAATATGACCTCAGCTCGCTCAGGTTCATCGGCTCTGGCGCAGCACCGCTCGGC AAGGACGTGATGGAGGGAGTGGCCAAGAATTTTCCAGAAGCTGTGATTGCCCAGGGTTAC GGAATGACTGAAACTTGTGGGATCATATCTTTAGAGTACCCAGAAAAAGGACAAATTCGT CAATTTGGTTCAACTGGAGCACTTGTCTCAGGAGTTGAAGCAAAAATTGTTGATGTAGAA ACATTGATATGTCTGCCACCAAATCAACTAGGAGAAATTTGTGTTCGAGGACCGAACATA ATGCAAGGGTATTTCAACAATGTGCAAGCTACTGAATTTACAATCAAGCAAGGGTGGTTG CATACTGGTGATATTGGATACTTTGATGAGGGAGGTCAGCTTTTCGTAGTTGATAGACTT AAAGAACTGATTAAGTACAAAGGTTTTCAGATTGCACCTGCCGAGCTTGAAGGGCTACTT CTGTCTCATCCAGAAATTCTGGATGCTGTTGTTATCCCGTTCCCCGATGCTGAAGCTGGT GAAGTTCCTATTGCTTACGTCGTAAGGTCCTCTGAGAGTTCTTTGACTGAAGTTGATGTC CAGAAATTTATTGAAAAGCAGGTCGCATACTACAAAAAATTGAGGAGGGTGACCTTTGTG GACAGCGTACCAAAATCTGCTTCAGGGAAGATCTTGAGAAGAGAACTCATCTCTAAAGTC AGATCATCCAAGCTATAGCAAGCCGGCTTCTGTGTTCGTAATACTGCTTGCCTCCTATCT ACTCCCCTCAGTCTAAATTATAAGTCATAGATCATAGATGTATATCATATCTAAATACAT CGTATGCAGAGAAGCTAGAACGACTTCCAATTTGAAAATTTGTCAGATTGAGCGTAAAGG TTTACATGTTACTGAGCGGAGCTTATCAAGCAATACATTCAGCTTGACACAGTTTGTGGG ACATGTATACATGGTGGTGTCGGATGACTTGTATCGAATATTGGGCCTGATTTACATTCA CTATTCGAAAATAGTACAGATATGTAATATGGCTCTGCTGCGTGTACATCTTACAGACAG TTGTACGAAGAAATATTGTCCGACAGTTTGTGCAACCAGCGCATTATCTGTGGGACTGTT AT