Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027683_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:11126731:11130713:1 gene:Zm00001d027683 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

ATGCGGCGGCTGGCGAAATCCCTCCTCCTCGCCTCCCTCTCCAGGACCCTCCGCCACCGC
CCCCAGCTCCCGCTGCTTCACCCTTGGCCTCCCCAGCCCCGTCGCCCGGAGCCCCGCCTC
CTCCCCTTCTCCACTCAAACCCTAGCCCCGGGCCCTGCTCCCCCGCCTGCGCTTGTTGCG
GCGTCGACGGGCGAGCCCACAGGCCTCGCGCTTCTAGAGTCCGCGGAGCTGCACGAGTCC
GAGGGGGACCACCAGGAGGCCCTCGGCCTCGCCCTCAAGGCGCTCGCGCCGCTGCAGGCG
TCCCACGGCGGGTGGTCGCTCCCCGTCGCGCGCGCGCTCCGTCTCGCCGGCGCCGCGGCC
ACCCGCGCCGGCAGCCTCAGCGACGGGCTCGAGTCCCTCGGCGCTGCCGCGGATATCGTC
GACTACCTGGCACCCGCGCGGCGCAAGGGGGTGCCTGCGGAGGTGGCGGTGGTCGGCGCT
GCCGTGTACGAGCAGCTGGCGCGCGCCAAAATGGCCATCGGGCGCCGGTGGGACGCGGTG
GGCGACCTCCAGCGTGCACTGGACCTGAAGACTCTGTTCCTGGAGGCCGGGAGTGCTGAG
CTTGGGAACGCCTACAGGGACGTCGCCGAGGCCTATGCGGGTGTGCTGGACTTCGACAAG
GCGCTGCCATTGTGTTCTAAGGCATTGGGGATTGCGGAGAGACGGTTTGGTGAGGACTCG
GCAGAAGTGGCTAAGCTACGGCGGCTTCTCATGTCTGTCTATACTGGTTTGGGTCGCCAT
GAGGAGGCTCTGGCTCAAATTGAGCTTGCTAAGGTGGTATATGAGCGATTGGGATTGAAT
GTTGAACTTTCTCAGGCTGAAATTGATGGGGCTAATATCCGTATCTTGTTGGGGAGATCG
GAGGAGGCGCTGAATAACATTAAGAGGGTAATGCAGCGGGCAGACAAGGAGAGCGAGGAG
CGTGCACTAGCATATGTCACAATGGCAAAGATATTGATGTCCGAGGATACGGTTTTGGAC
TCAAAGCGGTGCTTGGAGATCGCTCAGGGGATCATAGATGCAAAGGATTCCATCGACCCT
GGTCGGTTTGCTGAGGCATATGCTGAGATATCAATGTTGTATGAGTCGTTGGCAAATTTT
GAAACGTCTTCGGGCTCGTTTGAAATGGCTTCGAACTTGATGAAGAAAACACTGGCAATT
CTTGAGAGCGCCAAGGAGATGCATCACATCGAAGGCAGCATCTCAGCAAGGCTAGGGTGG
CTCCTCCTGTATATTAAAAATGTTGATGAGTCTGTCCAATATCTGGAGAGAGCGGTTGAT
AAATTGAAGAATTGCTTTGGACCACGACACTTTGGGTTAGGTTTTGCTTATAGGAATCTG
GGGCAGGCCTATCTTGAAATGAACCAACATCAATCAGCTGTGGAGTTCTTCAAACTTGCG
CTTGATATTATTGAAGCTACATTTGGACCGCTACATGATGATACCATTGACACAAAACAG
TGCATTGCAAATGCATACGGACTGATGAAAAGCTACAAACTTGCTATGGAGTTTCAAGAA
CAAGTCATGGATGCCTACAGTAGGTGTGGCCATGGTGCCTTGGATGATTTCAAGGAAGCT
GAAAGGCTTTTAGAGCAGATCAAGATGAAGGCTCAAGGATTGCGTCATGCAGTATTTCCT
GCAAATTCATTGCCTGATTCAGCTCTAGCTCTAGCTCAACGCAACAAAGACGATTAG

Peptide Sequence

PEP ID

Zm00001d027683_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:11126731:11130713:1 gene:Zm00001d027683 transcript:Zm00001d027683_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

MRRLAKSLLLASLSRTLRHRPQLPLLHPWPPQPRRPEPRLLPFSTQTLAPGPAPPPALVA
ASTGEPTGLALLESAELHESEGDHQEALGLALKALAPLQASHGGWSLPVARALRLAGAAA
TRAGSLSDGLESLGAAADIVDYLAPARRKGVPAEVAVVGAAVYEQLARAKMAIGRRWDAV
GDLQRALDLKTLFLEAGSAELGNAYRDVAEAYAGVLDFDKALPLCSKALGIAERRFGEDS
AEVAKLRRLLMSVYTGLGRHEEALAQIELAKVVYERLGLNVELSQAEIDGANIRILLGRS
EEALNNIKRVMQRADKESEERALAYVTMAKILMSEDTVLDSKRCLEIAQGIIDAKDSIDP
GRFAEAYAEISMLYESLANFETSSGSFEMASNLMKKTLAILESAKEMHHIEGSISARLGW
LLLYIKNVDESVQYLERAVDKLKNCFGPRHFGLGFAYRNLGQAYLEMNQHQSAVEFFKLA
LDIIEATFGPLHDDTIDTKQCIANAYGLMKSYKLAMEFQEQVMDAYSRCGHGALDDFKEA
ERLLEQIKMKAQGLRHAVFPANSLPDSALALAQRNKDD

Transcript Sequence

Transcript ID

Zm00001d027683_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:11126731:11130713:1 gene:Zm00001d027683 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

TGCCACCGCGGCGGCCCCTTCTCTTCCCTGTAATAAACCCCCGGCGAGCGATGCGGCGGC
TGGCGAAATCCCTCCTCCTCGCCTCCCTCTCCAGGACCCTCCGCCACCGCCCCCAGCTCC
CGCTGCTTCACCCTTGGCCTCCCCAGCCCCGTCGCCCGGAGCCCCGCCTCCTCCCCTTCT
CCACTCAAACCCTAGCCCCGGGCCCTGCTCCCCCGCCTGCGCTTGTTGCGGCGTCGACGG
GCGAGCCCACAGGCCTCGCGCTTCTAGAGTCCGCGGAGCTGCACGAGTCCGAGGGGGACC
ACCAGGAGGCCCTCGGCCTCGCCCTCAAGGCGCTCGCGCCGCTGCAGGCGTCCCACGGCG
GGTGGTCGCTCCCCGTCGCGCGCGCGCTCCGTCTCGCCGGCGCCGCGGCCACCCGCGCCG
GCAGCCTCAGCGACGGGCTCGAGTCCCTCGGCGCTGCCGCGGATATCGTCGACTACCTGG
CACCCGCGCGGCGCAAGGGGGTGCCTGCGGAGGTGGCGGTGGTCGGCGCTGCCGTGTACG
AGCAGCTGGCGCGCGCCAAAATGGCCATCGGGCGCCGGTGGGACGCGGTGGGCGACCTCC
AGCGTGCACTGGACCTGAAGACTCTGTTCCTGGAGGCCGGGAGTGCTGAGCTTGGGAACG
CCTACAGGGACGTCGCCGAGGCCTATGCGGGTGTGCTGGACTTCGACAAGGCGCTGCCAT
TGTGTTCTAAGGCATTGGGGATTGCGGAGAGACGGTTTGGTGAGGACTCGGCAGAAGTGG
CTAAGCTACGGCGGCTTCTCATGTCTGTCTATACTGGTTTGGGTCGCCATGAGGAGGCTC
TGGCTCAAATTGAGCTTGCTAAGGTGGTATATGAGCGATTGGGATTGAATGTTGAACTTT
CTCAGGCTGAAATTGATGGGGCTAATATCCGTATCTTGTTGGGGAGATCGGAGGAGGCGC
TGAATAACATTAAGAGGGTAATGCAGCGGGCAGACAAGGAGAGCGAGGAGCGTGCACTAG
CATATGTCACAATGGCAAAGATATTGATGTCCGAGGATACGGTTTTGGACTCAAAGCGGT
GCTTGGAGATCGCTCAGGGGATCATAGATGCAAAGGATTCCATCGACCCTGGTCGGTTTG
CTGAGGCATATGCTGAGATATCAATGTTGTATGAGTCGTTGGCAAATTTTGAAACGTCTT
CGGGCTCGTTTGAAATGGCTTCGAACTTGATGAAGAAAACACTGGCAATTCTTGAGAGCG
CCAAGGAGATGCATCACATCGAAGGCAGCATCTCAGCAAGGCTAGGGTGGCTCCTCCTGT
ATATTAAAAATGTTGATGAGTCTGTCCAATATCTGGAGAGAGCGGTTGATAAATTGAAGA
ATTGCTTTGGACCACGACACTTTGGGTTAGGTTTTGCTTATAGGAATCTGGGGCAGGCCT
ATCTTGAAATGAACCAACATCAATCAGCTGTGGAGTTCTTCAAACTTGCGCTTGATATTA
TTGAAGCTACATTTGGACCGCTACATGATGATACCATTGACACAAAACAGTGCATTGCAA
ATGCATACGGACTGATGAAAAGCTACAAACTTGCTATGGAGTTTCAAGAACAAGTCATGG
ATGCCTACAGTAGGTGTGGCCATGGTGCCTTGGATGATTTCAAGGAAGCTGAAAGGCTTT
TAGAGCAGATCAAGATGAAGGCTCAAGGATTGCGTCATGCAGTATTTCCTGCAAATTCAT
TGCCTGATTCAGCTCTAGCTCTAGCTCAACGCAACAAAGACGATTAGTTCTTCTGTATCA
GTGCCAACTTAGATGAGTTAATGGTAAACTGTTATTTTAC