Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027676_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:10854296:10857324:1 gene:Zm00001d027676 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin-binding receptor-like cytoplasmic kinase 1
Sequence

ATGATGAAGAGCGTCAGCGGCACCGGCTCGGCCGGGAGCCGGAGCGATCCGGGCGGCAGC
GGCGAGCTGTCCCGCTTCTCCGTCGCCACCACGGCGTCGTCCGCCTCGCAGCCTTCCGCG
AACGGTGGCGCGCGCGGGATCTCCTTCCTCGACGCCTTCCGGTCCTGCTTCGTGCCCCCG
GAGGCGCGCTCGCCGGAGAACTCCATGTCCGACGAATCCCACCCTTCCCACCAACTCTCG
CAGTCTTTGAGCTCACAAGGTTCTAACAGTGGGAGCGTGTTTGGGAGCAAGCGATCGATT
AAAGGAATGTATAGTCCCATGCACAAGAGTTCTTTAGATAGGGAGATCCCTGGCAGCACA
AAATTCTCCTTGCCGCAGATCCAGAAAGCAACAAAGAACTTCTCGCCGAACTTCAAGATT
GGGCAGGGTGGTTCTGGGACTGTATACAAGGGTCAGCTTGCTGATGGTACTCTTGTCGCT
GTCAAACGTGCCAAGAAGAATGTTTATGACAAGCATATGGGTCGTGAGTTCTGGAACGAG
ATTGAGACATTGCAACGCATTGAGCACCTGAATTTGGTTAGGTTTCATGGGTACCTGGAG
TTTGGTGGCGAGCAGTTGATTATTGTGGAGTATGTTCCCAATGGGAATCTTCGAGAGCAC
CTCGACTGTATAAATGGTAAAATATTGGAATTCTCACTGAGATTGGAAATTGCAATTGAT
GTGGCTCATGCTATTACATATCTTCATACCTATTCAGATCATCCAGTCATCCACAGAGAC
ATCAAATCCTCAAACATTCTTCTAATGAACAATTGTCGAGCCAAGGTTGCTGACTTTGGA
TTCGCCAAACTGGCTCCAACTGATTCTAGTCATATATCTACTCAAGTCAAAGGAACAGCA
GGCTATCTCGATCCAGAATATCTCAGAACATACCAGCTCAATGAGAAGAGTGATGTCTAC
TCCTTTGGAGTCCTTCTGGTGGAGTTGGTTACTGGGAGGCGCCCTATAGAGCCAAAAAAG
GCAATCATTGAGCGTGTTACCACAAAATGGGTAAGTTTATGTCACTCCAGACATAATACT
TAG

Peptide Sequence

PEP ID

Zm00001d027676_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:10854296:10857324:1 gene:Zm00001d027676 transcript:Zm00001d027676_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin-binding receptor-like cytoplasmic kinase 1
Sequence

MMKSVSGTGSAGSRSDPGGSGELSRFSVATTASSASQPSANGGARGISFLDAFRSCFVPP
EARSPENSMSDESHPSHQLSQSLSSQGSNSGSVFGSKRSIKGMYSPMHKSSLDREIPGST
KFSLPQIQKATKNFSPNFKIGQGGSGTVYKGQLADGTLVAVKRAKKNVYDKHMGREFWNE
IETLQRIEHLNLVRFHGYLEFGGEQLIIVEYVPNGNLREHLDCINGKILEFSLRLEIAID
VAHAITYLHTYSDHPVIHRDIKSSNILLMNNCRAKVADFGFAKLAPTDSSHISTQVKGTA
GYLDPEYLRTYQLNEKSDVYSFGVLLVELVTGRRPIEPKKAIIERVTTKWVSLCHSRHNT

Transcript Sequence

Transcript ID

Zm00001d027676_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:10854296:10857324:1 gene:Zm00001d027676 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calmodulin-binding receptor-like cytoplasmic kinase 1
Sequence

GAACACAGAGCGCGAAACTCCACGGCTCCGAGTCTCCGACCATTCTCGCCCCCGGCTCTT
TCCTTCTTCCCGTGTCATCGTCAAACCGCCGCTTTCCAATTCCAGGCCATCAAGACGTAG
CAGCTCCCCTTGCGTCTGCGCACGCCACCGAAGGATCCTCGCCGCGCGTGCAGTGCGATC
CGAGGGGAGGGGTCCAAGGCCATGATGAAGAGCGTCAGCGGCACCGGCTCGGCCGGGAGC
CGGAGCGATCCGGGCGGCAGCGGCGAGCTGTCCCGCTTCTCCGTCGCCACCACGGCGTCG
TCCGCCTCGCAGCCTTCCGCGAACGGTGGCGCGCGCGGGATCTCCTTCCTCGACGCCTTC
CGGTCCTGCTTCGTGCCCCCGGAGGCGCGCTCGCCGGAGAACTCCATGTCCGACGAATCC
CACCCTTCCCACCAACTCTCGCAGTCTTTGAGCTCACAAGGTTCTAACAGTGGGAGCGTG
TTTGGGAGCAAGCGATCGATTAAAGGAATGTATAGTCCCATGCACAAGAGTTCTTTAGAT
AGGGAGATCCCTGGCAGCACAAAATTCTCCTTGCCGCAGATCCAGAAAGCAACAAAGAAC
TTCTCGCCGAACTTCAAGATTGGGCAGGGTGGTTCTGGGACTGTATACAAGGGTCAGCTT
GCTGATGGTACTCTTGTCGCTGTCAAACGTGCCAAGAAGAATGTTTATGACAAGCATATG
GGTCGTGAGTTCTGGAACGAGATTGAGACATTGCAACGCATTGAGCACCTGAATTTGGTT
AGGTTTCATGGGTACCTGGAGTTTGGTGGCGAGCAGTTGATTATTGTGGAGTATGTTCCC
AATGGGAATCTTCGAGAGCACCTCGACTGTATAAATGGTAAAATATTGGAATTCTCACTG
AGATTGGAAATTGCAATTGATGTGGCTCATGCTATTACATATCTTCATACCTATTCAGAT
CATCCAGTCATCCACAGAGACATCAAATCCTCAAACATTCTTCTAATGAACAATTGTCGA
GCCAAGGTTGCTGACTTTGGATTCGCCAAACTGGCTCCAACTGATTCTAGTCATATATCT
ACTCAAGTCAAAGGAACAGCAGGCTATCTCGATCCAGAATATCTCAGAACATACCAGCTC
AATGAGAAGAGTGATGTCTACTCCTTTGGAGTCCTTCTGGTGGAGTTGGTTACTGGGAGG
CGCCCTATAGAGCCAAAAAAGGCAATCATTGAGCGTGTTACCACAAAATGGGTAAGTTTA
TGTCACTCCAGACATAATACTTAG