Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027656_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:10261506:10265855:1 gene:Zm00001d027656 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lethal leaf spot1 description:Lethal leaf-spot 1

Sequence

ATGGAGAACGTCTCTGATCCGTCCCATATAGAATTTGCTCACCACAAGGTTACTGGACGA
AGAGATAGAGCCAGGCCTTTGACATTCAGGATGGAATCAAGTGGTGCCTGGGGTTACTCA
GGAGCAAATTCTGGTAATCCTCGCATTACTGCAACTTTTGAGGCCCCTTGTTATGCATTA
AACAAAATAGAGATAGACACAAAGTTACCCATTTTTGGCGACCAGAAATGGGTCATATGG
ATTTGCTCTTTCAACATTCCAATGGCCCCAGGGAAGACTCGTTCTATTGTCTGTAGCGCT
CGAAACTTTTTCCAGTTCACAATGCCAGGAAAAGCATGGTGGCAGCTTGTTCCTCGATGG
TATGAACATTGGACTTCAAATTTGGTCTATGATGGCGATATGATCGTTCTTCAAGGCCAG
GAGAAGATTTTCCTAGCTGCAACCAAGGAGTCTTCTACGGATATTAATCAGCAGTACACA
AAGATCACATTCACGCCCACACAAGCTGATCGATTTGTTTTAGCATTCCGCACGTGGCTA
AGGAAATTTGGCAATAGCCAGCCGGAGTGGTTTGGAAATCCTACACAAGAAGCATTGCCT
TCCACCGTCCTTTCAAAGCGCGAGATGCTAGACAGATACGAGCAGCACACGTTGAAATGC
TCGTCTTGCAAAGGAGCATATAATGCTTTCCAGAATCTGCAGAAGGTATTCATGGGAGCG
ACAGTAGTTTGCTGTGCTGCCGCTGGTATTCCTCCAGATGTTCAGCTCAGGCTATTGATC
GGTGCGGCTGCTTTGGTCAGTGCCGCTATAGCATACGCATTCCATGAGCTCCAGAAGAAT
TTTGTATTCGTGGATTACGTGCATGCTGACATTGATTGA

Peptide Sequence

PEP ID

Zm00001d027656_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:10261506:10265855:1 gene:Zm00001d027656 transcript:Zm00001d027656_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lethal leaf spot1 description:Lethal leaf-spot 1

Sequence

MENVSDPSHIEFAHHKVTGRRDRARPLTFRMESSGAWGYSGANSGNPRITATFEAPCYAL
NKIEIDTKLPIFGDQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFTMPGKAWWQLVPRW
YEHWTSNLVYDGDMIVLQGQEKIFLAATKESSTDINQQYTKITFTPTQADRFVLAFRTWL
RKFGNSQPEWFGNPTQEALPSTVLSKREMLDRYEQHTLKCSSCKGAYNAFQNLQKVFMGA
TVVCCAAAGIPPDVQLRLLIGAAALVSAAIAYAFHELQKNFVFVDYVHADID

Transcript Sequence

Transcript ID

Zm00001d027656_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:10261506:10265855:1 gene:Zm00001d027656 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lethal leaf spot1 description:Lethal leaf-spot 1

Sequence

GCCAAAACCAGGTTTCTCCCCGTTGCCGTGGCAGAACTCTGTTCTTGCCCAGTCTAGAAG
ATCTGCACCGTTCCAACCACCGACTCCGGCCGCCAAGCATATAGCCAGCGCGGCGAAGAA
TTCCCAACGCGAAAGCCAAAACCTCTTCACTTCACTTCACGTCGACACGTGCGGGGAGAA
TATGCGCGCGACAATCCCAGCCCTGTCGCTCCTGGTGACGCCGCGGCTCCCCTCGCTCGC
CGTGCCGCTGGCTGGAGGCCGCCTCCGCGTGGGCGGTCGTTCTCGGACCCGCCTCCGCGT
GGCGGCGCCGACGTCCGTCCCAGGGGAAGCGGCGGAGCAGGCGGAGCCGAGCACGTCGGC
GCCCGAGTCCGGCGAGAAGTTCTCGTGGAGGGATCACTGGTACCCGGTCTCCCTCGTCGA
GGACCTCGACCCCAGCCGCCCCACCCCGTTCCAGCTCCTCAACCGCGACCTCGTCATCTG
GAAGGAACCCAAGTCCGGCGAGTGGGTCGCGCTCGACGACCGCTGCCCCCACCGCCTTGC
CCCGCTCTCGGAGGGCAGGATCGATGAGACGGGGTGCTTGCAGTGCTCGTATCACGGATG
GTCATTCGATGGCTCCGGCGCCTGCACCAAGATCCCCCAGGCCATGCCCGAGGGTCCTGA
GGCCCGTGCGGTGCGGTCACCGAAGGCGTGCGCGATCAAGTTCCCCACCCTCGTCTCCCA
GGGGCTGCTCTTCGTGTGGCCCGATGAGAATGGGTGGGAGAAAGCGGCCGCCACCAAGCC
TCCAATGTGCGTAGAGTCAGACTTTGGACTGCGGCTAATTGGTTGGATTCAGTTTTGCAT
TTCGGTGTCTGAATTCGATCTTGTTTGGTTTCAGGTTGCCGAAAGAATTTGAGGACCCGG
CCTTCTCCACGGTGACAATCCAGAGGGACTTGTTCTATGGTTATGATACGTTGATGGAGA
ACGTCTCTGATCCGTCCCATATAGAATTTGCTCACCACAAGGTTACTGGACGAAGAGATA
GAGCCAGGCCTTTGACATTCAGGATGGAATCAAGTGGTGCCTGGGGTTACTCAGGAGCAA
ATTCTGGTAATCCTCGCATTACTGCAACTTTTGAGGCCCCTTGTTATGCATTAAACAAAA
TAGAGATAGACACAAAGTTACCCATTTTTGGCGACCAGAAATGGGTCATATGGATTTGCT
CTTTCAACATTCCAATGGCCCCAGGGAAGACTCGTTCTATTGTCTGTAGCGCTCGAAACT
TTTTCCAGTTCACAATGCCAGGAAAAGCATGGTGGCAGCTTGTTCCTCGATGGTATGAAC
ATTGGACTTCAAATTTGGTCTATGATGGCGATATGATCGTTCTTCAAGGCCAGGAGAAGA
TTTTCCTAGCTGCAACCAAGGAGTCTTCTACGGATATTAATCAGCAGTACACAAAGATCA
CATTCACGCCCACACAAGCTGATCGATTTGTTTTAGCATTCCGCACGTGGCTAAGGAAAT
TTGGCAATAGCCAGCCGGAGTGGTTTGGAAATCCTACACAAGAAGCATTGCCTTCCACCG
TCCTTTCAAAGCGCGAGATGCTAGACAGATACGAGCAGCACACGTTGAAATGCTCGTCTT
GCAAAGGAGCATATAATGCTTTCCAGAATCTGCAGAAGGTATTCATGGGAGCGACAGTAG
TTTGCTGTGCTGCCGCTGGTATTCCTCCAGATGTTCAGCTCAGGCTATTGATCGGTGCGG
CTGCTTTGGTCAGTGCCGCTATAGCATACGCATTCCATGAGCTCCAGAAGAATTTTGTAT
TCGTGGATTACGTGCATGCTGACATTGATTGAAAGATTCGTGAGGATCTGTTGTGTCGAC
ATCACTCGCTCGCGAGTCGTGTCTGTAGTCTAGGGCTCTAGGCGTCTAGGTAGGGAAAGT
AACTTTTTGCCGGGTATAGGTCATATTGCTCACATATGTATTTTGTATAGTGTATGCACT
CAACTGTAGCCGATGCAGTGCGAAAATATAGTTTTTATGTTATTATCTATTGGATTAAAA
TTGTCTCCAGATCCTTTTAGCATGTAAAATGCCATTTTTCAAATGGAAGTTCTCAATTGC
GCCTATAGTTGCAGGGAACATTCTGATGTGATCATGCCATTCTCTGGCTCTGAGCAGTTA
GAGCTGGGCACGAAGATGGCATGTGAAACTATTTCAATACAGTGTCTGGTCAGAATCTT