Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027649_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:10105590:10109563:1 gene:Zm00001d027649 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHY-type/CTCHY-type/RING-type Zinc finger protein
Sequence

ATGGACGGTGACGCCGGACCAGAGCAACACGGGTGCGTGCACTACAGGAGGGGGTGCAAG
ATAAGGGCGCCGTGCTGCGGCGAGGTATTTGGTTGCAGGCACTGCCACAACGAAGCCAAG
GACTCGCTGGAGGTCAGCGTCCACGACCGCCACGTGCTTCCCCGTCACGACATCAAGCTG
GTTATCTGCTCTCTCTGCAACAAAGAACAGGATGTAAGTTCCCTGACGAAGCAGGGACAG
TGTTCTTCGGCCACTGTTGGTGTTACCTGCCACACACCACATGAAAAAAAAAACCCATCT
CGTCTGTCGACAGGTGCAGCAAGACTGTGCGAACTGCGGAGCATGTCTCGGCAAATACTT
CTGCGCGAAATGCAACTTCTTCGACGACGATGTAAGCTCTCCCCCCCTTTTTTTGATGTG
TTAAGCGAAGTGGCCGATGGGATTTTACGCGCTAATTTAGATGTAATTTCAGAAGTGTTC
CCTCTTCTGTTTTCTCCGGTTTTGTTGTCGCGTTCCCTGGCATTTCAGGTGTCGAAGAAC
CAATTTCACTGCGATGGGTGCGGCATATGCAGGCAAGACTGGTGGCGCAGAGAATTTCTA
TCACTGTGGCAGATGTGGATGCTGCTACACCACTACGCTGAAGGATTCTCACCGCTGCGT
GGACGGAGCTATGCATCACAACTGCCCTGTCTGCATGGAGGCGACTTCTGGCCACAGTAT
CTATTCGACTCGATGAAAGCTATCAGCGTGCTCCACTGCGGACACACCATCCACCTGGAA
TGCCTTTACGAGATGAGAGCGCACCAGCAGTTTTCATGCCCGGTGTGCCTGAGGTCTGCC
TGCAACATGTCCGACATCTGGCAAAAGCTGGATCAGCAGGTTGCAGCGTCCCCGATGCCA
GCGATCTATCAGAAGAAGATGGTATGGATCCTTTGCAACGACTGTGGCGTGACGTCCAAC
GTGCAGTTCCACATCTTGGCGCACAAGTGCCCTGGATGCAGCTCTTACAACACCCGGCAG
ACGAGGGGCGATCCAGCCGCATGCTCTAGAGTTTGA

Peptide Sequence

PEP ID

Zm00001d027649_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:10105590:10109563:1 gene:Zm00001d027649 transcript:Zm00001d027649_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHY-type/CTCHY-type/RING-type Zinc finger protein
Sequence

MDGDAGPEQHGCVHYRRGCKIRAPCCGEVFGCRHCHNEAKDSLEVSVHDRHVLPRHDIKL
VICSLCNKEQDVSSLTKQGQCSSATVGVTCHTPHEKKNPSRLSTGAARLCELRSMSRQIL
LREMQLLRRRCKLSPPFFDVLSEVADGILRANLDVISEVFPLLFSPVLLSRSLAFQVSKN
QFHCDGCGICRQDWWRREFLSLWQMWMLLHHYAEGFSPLRGRSYASQLPCLHGGDFWPQY
LFDSMKAISVLHCGHTIHLECLYEMRAHQQFSCPVCLRSACNMSDIWQKLDQQVAASPMP
AIYQKKMVWILCNDCGVTSNVQFHILAHKCPGCSSYNTRQTRGDPAACSRV

Transcript Sequence

Transcript ID

Zm00001d027649_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:10105590:10109563:1 gene:Zm00001d027649 gene_biotype:protein_coding transcript_biotype:protein_coding description:CHY-type/CTCHY-type/RING-type Zinc finger protein
Sequence

GACGCAACCGCAACTCCCTGCTGCTTCTTTGGGGGTGCCGGTGCGATGTTCCACGCCACG
CTGCGCCCTGCTCGCCCGCCTAGCGCTATATAGCCCGTGCCCGTGTCCGTGTCCGTGTCG
TGCAGCGGATTGCGGAGTGGCATTGGGTTGGCAGCACGCCCCTGCACACGGTGACACGGG
CCACGGCGCGGCGCGGCGCGGCACGGGGAGCGAGCGCCGAGCGAGAGCAAGCAACCGCTG
TCCGCCGGGCCGGCCACGGCGCTGCCCCCTGCTTCGCGCCTTCGCCGGTGCGCTCACGCC
TCACGCAGGTGCATGCATCGACCTACGGTATCCTAGTCTGGGATCAGAAAAGAACACAGC
AACAACAAAGAAGAAAGGCGCGAGCGATGGACGGTGACGCCGGACCAGAGCAACACGGGT
GCGTGCACTACAGGAGGGGGTGCAAGATAAGGGCGCCGTGCTGCGGCGAGGTATTTGGTT
GCAGGCACTGCCACAACGAAGCCAAGGACTCGCTGGAGGTCAGCGTCCACGACCGCCACG
TGCTTCCCCGTCACGACATCAAGCTGGTTATCTGCTCTCTCTGCAACAAAGAACAGGATG
TAAGTTCCCTGACGAAGCAGGGACAGTGTTCTTCGGCCACTGTTGGTGTTACCTGCCACA
CACCACATGAAAAAAAAAACCCATCTCGTCTGTCGACAGGTGCAGCAAGACTGTGCGAAC
TGCGGAGCATGTCTCGGCAAATACTTCTGCGCGAAATGCAACTTCTTCGACGACGATGTA
AGCTCTCCCCCCCTTTTTTTGATGTGTTAAGCGAAGTGGCCGATGGGATTTTACGCGCTA
ATTTAGATGTAATTTCAGAAGTGTTCCCTCTTCTGTTTTCTCCGGTTTTGTTGTCGCGTT
CCCTGGCATTTCAGGTGTCGAAGAACCAATTTCACTGCGATGGGTGCGGCATATGCAGGC
AAGACTGGTGGCGCAGAGAATTTCTATCACTGTGGCAGATGTGGATGCTGCTACACCACT
ACGCTGAAGGATTCTCACCGCTGCGTGGACGGAGCTATGCATCACAACTGCCCTGTCTGC
ATGGAGGCGACTTCTGGCCACAGTATCTATTCGACTCGATGAAAGCTATCAGCGTGCTCC
ACTGCGGACACACCATCCACCTGGAATGCCTTTACGAGATGAGAGCGCACCAGCAGTTTT
CATGCCCGGTGTGCCTGAGGTCTGCCTGCAACATGTCCGACATCTGGCAAAAGCTGGATC
AGCAGGTTGCAGCGTCCCCGATGCCAGCGATCTATCAGAAGAAGATGGTATGGATCCTTT
GCAACGACTGTGGCGTGACGTCCAACGTGCAGTTCCACATCTTGGCGCACAAGTGCCCTG
GATGCAGCTCTTACAACACCCGGCAGACGAGGGGCGATCCAGCCGCATGCTCTAGAGTTT
GAGAGCAAATAAAACTGCAGTACTGCACTGCACATAAACTCGTGGGGTTGTGCGGTCGAT
CGATAGGTAGCTTGCATGGAGGAAATTAAAGACTACCATTGCGCATGGACACGATTGGTG
CCGGCAGTTGAGTACGTGTATTAGGCCTGTCATATGTAGATGTATCATATGCTATGCCTT
CGCAAAGAAGAATTTGGCGCAGCGGACAGGGTATATACATTTCTTTTGTTGCTATATATA
CACACATATTTTTGTTGCGCGGTGCTTGTGCCAATGATGGAGAGTTCGCACGTTGTTTTT
CTT