Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027637_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:1:9639455:9644114:-1 gene:Zm00001d027637 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGGCCTTAAATATATCAATCAAGATTCTTCCTTCTGCGGCAAAATGTGTTACTGTAGAT ATGGTGCATAATATTGGTGATTTTATCTCAGAGTTGCTAAGTCTTATGGAAAGCTCAATA GTTGACAATGACAAGAAAATTCATGGAGCTGCTCTGGATATCACTAAGGCTGCACCTGTT TTTCTAGATGAAACAACTAAGCTGTGCCGGGCATACTCTGAGGCCACAAAAGTAGACAAC TGCACAATGAGTATAACTGATGAAGATGCTACTGTGAAACACAACAAACAAGGTCTTGCT AGTGATGTCATCAGGATTACATCATCCACTATTCAGACTATGTGTAGATTGGGAACCTAT GCAGCATCCAGTGGTGGAAGCCAGGTGATTTTACTGAATGTATCATGGAAGGGTGTAGTC TCATTACTCCAAAGCGGTAAAGGGATGATTGAAGGAAAAGTAAATGTCAGAGAAATAATT GTAACCCTTCTATCTCTGTCCATAGAATCTCTAAGAGTTGCTGCTGAAACATGGTGTGCA CCGTTACTAGAAACCCTTGGTGCTACTGAAGCCAGAAGGGCGTTCCTACCAATCAAGTTT TTCTTAATAAATGCTGTAAGGATTTGTTCAACATATCCATCTGAAGCAATGATTATATAC AAGAACATAATCAATTGTGCAGTAGTGATCACATCCTCAAGCATTCTATTTAGCAAGAAG CCACAGTTGAAGGCAGCAAATGAGACCCTTGTTGAATTGTTGGAGCCTACTTTATTTGTT TTACTAGATACACTTATGAAATCATCTGACTTAACACCAGAATCCAAATGCCAGCTTGCA CATCATTTTTTTGAAAACGAAGAAGATAAGAGTCCAGATCTTATGGGACAAGCTAATCAG AGAGAGATAAATTTGGCCTCACTGGATTGCATTTTCTCTATGGATTCAGATGTGGATCAT AGAAATAGAGCACTTTTACCTGCTGAGTTGCTTGTGTTTTTGCACTTTCTCAATGCTTCA TCATGGTTGACAGAAATGGTGGTCATCACATTATCTAAAAAGCTACAGACTCTTCTTAAT ATATTGACATCAGAAGACATCTACTCCTATGTCCTTGGCTTCCAAATCCCTGCCTTAAAT GGCGCAGACCAGTCTCCTGCAGTTGTTTGGCAACCTGTGTATACTTCTATCATACAAGCA TTGAAGGCTTTTATGATTTCTACTGTTGCTTCAAGTGCTGCTTGGAACGAGTTAGAGGCT TTCTTACTTGAAAATATTTTCCATCCCCATTTCCTTTGCTTGGAAATTATTACAGAGCTG TGGTGTTTCTTCATTCGTTATGCTGAAACTGAGACTTCAATTAATCTAGTTAATCAAGTC TCCCTTCTACTAAAGACTGTTGCATCACCAGAGGATGTTCTTTCACCTCTCAGTGCTTTG CGGAAAGTTGCACGATCATTGTGCATCATCTTGAGCTATGCATCTTCTGCAACTGTTGAT CAAATATATACTTGTGTGCTGAATGGTGAAAACTCTTCCAAGTCTTCAATCTTACACTTA GCATTGCTGATGGAAGGATTTCCTTTGGATTCATTGTCTGATGGTACAAAGGAACTTGCT ATGAAGAAAATGTTTACCTCTTTTGCTGGCTATCTGGAGAGCTACTCCAAGAACCACCGA GTAATCAATGTGCCAACTTGTAAATTGGGTGTTGTAGGACTTCCTATACATGCTCTAGCC TCTGCATTGCAGCATAGGTAA

Peptide Sequence

PEP ID	Zm00001d027637_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:1:9639455:9644114:-1 gene:Zm00001d027637 transcript:Zm00001d027637_T006 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MALNISIKILPSAAKCVTVDMVHNIGDFISELLSLMESSIVDNDKKIHGAALDITKAAPV FLDETTKLCRAYSEATKVDNCTMSITDEDATVKHNKQGLASDVIRITSSTIQTMCRLGTY AASSGGSQVILLNVSWKGVVSLLQSGKGMIEGKVNVREIIVTLLSLSIESLRVAAETWCA PLLETLGATEARRAFLPIKFFLINAVRICSTYPSEAMIIYKNIINCAVVITSSSILFSKK PQLKAANETLVELLEPTLFVLLDTLMKSSDLTPESKCQLAHHFFENEEDKSPDLMGQANQ REINLASLDCIFSMDSDVDHRNRALLPAELLVFLHFLNASSWLTEMVVITLSKKLQTLLN ILTSEDIYSYVLGFQIPALNGADQSPAVVWQPVYTSIIQALKAFMISTVASSAAWNELEA FLLENIFHPHFLCLEIITELWCFFIRYAETETSINLVNQVSLLLKTVASPEDVLSPLSAL RKVARSLCIILSYASSATVDQIYTCVLNGENSSKSSILHLALLMEGFPLDSLSDGTKELA MKKMFTSFAGYLESYSKNHRVINVPTCKLGVVGLPIHALASALQHR

Transcript Sequence

Transcript ID	Zm00001d027637_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:9639455:9644114:-1 gene:Zm00001d027637 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	GGCGGGAAGCGGCAAAACCCAGCAGGCCAGCACCAGCACCAGCACCAGCACCGTGCCGCC CCTGGGCCGGCCAGCCGCCAGCGCGACATCGAGCGAGCAATGGAGGTCGGCGGCGACCTG CAGTCCCTCCTAGAGGCGATCAAATCCTCCGAGGTGCGACATCGTATCCCTCGCATTGTC CGGGCGTCGATTTCGGGGTCCCGTTCCGTGCCCGTTCGTTATTCCCCTCTCCCTAGGGTT TGGTATGGTTCACGGCGCCATGTGTTCGCTGCTGTGCTCTTGCTGGGTACGCGCTCGTGA GATTCGGGGGTTAGTTGGATTGCCATTAGGTAGACGCTAGCAACGGGGTTTGTGTGTGTG GGGTTTACTGTTTGCTGAGCTTATTGGTAAGCTTCGGTTCCCACTTTGTATTAAAAGGTC TTACGTCCAATCGTTGTGGGGCTAATCAGCGATCATTTTGATGTTCATTTCCATTTGCTT TCAGAGTTCCCGCACATTGCATTTCTATTCTACTTCTGAAACGGCGATTGGATGTTGATA TTATGCTCCTGCCATGAAGTCCAATGTATCGTGCTAACTGTACACTGATCTGTAACAGGT GCTTGAAGATAGAATTGGGCTCATCAACCGACTCGAGAGTTCCTTTGAGTATTCTGCGGA TGATCTGAGACCAGTACTTGACAGTCTTAATGTATCTTGGGATGATTCTGGATGTTCAGG TCTGTCGCACTGCATGCTACACAAGTCAATTTTGCAGGTTGCTCTAAAATGTTCATATAT AGAAACAACTGGTTGTCTAGGCCAATTTCTTGCACTTGGTGCAAAGGCGAGCTCATGGTG TCGAAAGCATATCGTATGTTCCATCGAATCTGTTGATGATTCTGAAGATGTCCAACAGGA AGAACACTCCAAAATACTCCCAGAGTTCTTTGGTTCTAGATAATTTTGATGGCCTTAAAT ATATCAATCAAGATTCTTCCTTCTGCGGCAAAATGTGTTACTGTAGATATGGTGCATAAT ATTGGTGATTTTATCTCAGAGTTGCTAAGTCTTATGGAAAGCTCAATAGTTGACAATGAC AAGAAAATTCATGGAGCTGCTCTGGATATCACTAAGGCTGCACCTGTTTTTCTAGATGAA ACAACTAAGCTGTGCCGGGCATACTCTGAGGCCACAAAAGTAGACAACTGCACAATGAGT ATAACTGATGAAGATGCTACTGTGAAACACAACAAACAAGGTCTTGCTAGTGATGTCATC AGGATTACATCATCCACTATTCAGACTATGTGTAGATTGGGAACCTATGCAGCATCCAGT GGTGGAAGCCAGGTGATTTTACTGAATGTATCATGGAAGGGTGTAGTCTCATTACTCCAA AGCGGTAAAGGGATGATTGAAGGAAAAGTAAATGTCAGAGAAATAATTGTAACCCTTCTA TCTCTGTCCATAGAATCTCTAAGAGTTGCTGCTGAAACATGGTGTGCACCGTTACTAGAA ACCCTTGGTGCTACTGAAGCCAGAAGGGCGTTCCTACCAATCAAGTTTTTCTTAATAAAT GCTGTAAGGATTTGTTCAACATATCCATCTGAAGCAATGATTATATACAAGAACATAATC AATTGTGCAGTAGTGATCACATCCTCAAGCATTCTATTTAGCAAGAAGCCACAGTTGAAG GCAGCAAATGAGACCCTTGTTGAATTGTTGGAGCCTACTTTATTTGTTTTACTAGATACA CTTATGAAATCATCTGACTTAACACCAGAATCCAAATGCCAGCTTGCACATCATTTTTTT GAAAACGAAGAAGATAAGAGTCCAGATCTTATGGGACAAGCTAATCAGAGAGAGATAAAT TTGGCCTCACTGGATTGCATTTTCTCTATGGATTCAGATGTGGATCATAGAAATAGAGCA CTTTTACCTGCTGAGTTGCTTGTGTTTTTGCACTTTCTCAATGCTTCATCATGGTTGACA GAAATGGTGGTCATCACATTATCTAAAAAGCTACAGACTCTTCTTAATATATTGACATCA GAAGACATCTACTCCTATGTCCTTGGCTTCCAAATCCCTGCCTTAAATGGCGCAGACCAG TCTCCTGCAGTTGTTTGGCAACCTGTGTATACTTCTATCATACAAGCATTGAAGGCTTTT ATGATTTCTACTGTTGCTTCAAGTGCTGCTTGGAACGAGTTAGAGGCTTTCTTACTTGAA AATATTTTCCATCCCCATTTCCTTTGCTTGGAAATTATTACAGAGCTGTGGTGTTTCTTC ATTCGTTATGCTGAAACTGAGACTTCAATTAATCTAGTTAATCAAGTCTCCCTTCTACTA AAGACTGTTGCATCACCAGAGGATGTTCTTTCACCTCTCAGTGCTTTGCGGAAAGTTGCA CGATCATTGTGCATCATCTTGAGCTATGCATCTTCTGCAACTGTTGATCAAATATATACT TGTGTGCTGAATGGTGAAAACTCTTCCAAGTCTTCAATCTTACACTTAGCATTGCTGATG GAAGGATTTCCTTTGGATTCATTGTCTGATGGTACAAAGGAACTTGCTATGAAGAAAATG TTTACCTCTTTTGCTGGCTATCTGGAGAGCTACTCCAAGAACCACCGAGTAATCAATGTG CCAACTTGTAAATTGGGTGTTGTAGGACTTCCTATACATGCTCTAGCCTCTGCATTGCAG CATAGGTAAGTCTGTTCTCTAATTACCAGTATTGTTCACTCTGATGATGATGATGGCTGT CTTATACACAGTACTTTTTTTGGCAGTGTAATAAATGTTGATAGTATTG