Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027590_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:8573975:8577848:-1 gene:Zm00001d027590 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:php20603
Sequence	ATGCAGGTCGCCGACGCTCGCGCCATCGACACCGGCAAGGCCTCGGACACCATGCGCGCC ATCTGCGATGCCGTGCTCGCCCTCGCCTGGCGCTGCGCTCCCGGCACGGGGTCCCCGGGC GAGGCCTGCCACTGGGCCGACGGGTACCCACTCAACGTGCTCCTCTACGTCTCGCTGCTC CAGGCCATATTTGACCTCAAGGAGGAGACCGTTGTGCTCGACGAGGTGGATGAGCTCCTG GAGCTCATGAGGCGGGCATGGCAGACGCTGGGGATCGACAAGATGATCCACAACGTGTGC TTCGCTTGGGTGCTCTTCCAGCAGTACGTGGCCACCGGGCAGATCGAGCCGGACCTCGCC GGCGCCGCACTCACGGTGCTCGGTGATGTGGCAGCCGACGCGAAGCAGGAGCACCGTGAC CCGGTGTACACCCAGGTGCTCTCGAGTGTTCTTGGCTCGATACATGACTGGTCAGAGAAA CGGCTGCTTGATTACCATGAATGGTACGGGAAGGGCATGGCTGCCACCGGCGCTGGGGCA ATGGTGATTCCGCTGTCTCTGGCACTTTCCACGAGCAAGATCATCGCAGAGAGTGTGCCT GGGATGGGCATCGATCTGGCAGACTCCGAGCACGACGGCATCGGGAGCTTCGCTGGCAAC CGTGTGGATCACTACGTCAGATGCTCCATGAGAAATGCCTTCGCTAAGGCATTGGAGAAC GAGCTCGGACAAGGGAACAGCATGGTCATCCAACGCGACGACGACCCCAGCGAGACCATG GCACGGCTCGCCAAGGACACGGAGCAGCTGGCTCAGTTCGAGCTGGAGAACTTCAGCCCG GTGCTGAAGCGGTGGCACCCGTTCCCGGGCGCGTCCGCGGTGGCCACGCTCCACAGCTGC TACGGCGTCTTGCTGAAGCAGTACGTGGCCAAGGCGACGTGCCTGACCAACGAGCTCGTG CACGTGCTGCACGCGGCGGGCAGGCTCGAGAAGGCCCTGGTGCCGATGATGGTCGAGGAC GTGGCGGACAGCGACGACGGCGGCAGGTCGTTGGTCAGGGAGGTCGTCCCCTACGACGTG GACTCCCTCGTGGCGCGCTTCCTCCGGACTTGGATCGAGGAGAGGCTCAGGGTTGCTAGG GAGTGCCTCCTGAGGTCCAAGGACACTGAGAGCTGGATACCCAAGTCCAAAGGCGAGCCG TATGCGCGATCCGCGGTGGAGCTGATGAAGCTGGCCAAGGCGACCGTCGACGAGTTCTTC GGGATCCCGGTGACCGCGAGGGACGACATGGTTCAGAACGTCGCCGACGGCTTGGGCGCC ATCGTTCAGGAGTACATCTCCTTCCTCGCGTCTTGCGGCACCAAGCAGAGCTACCTCCCT CCGCTGCCTCCACTGACCAGGTGCAACCAGGACTCGACGATCATCAGGCTCTGGAAGAGG GCGGCGACGCCGTGCCGAGAAGCCGGGACGAACCCGCGCGGCCGCGCCCACCACGGCCAG AGCGAGTCCATCTCGGGCGGCAACAACCCGCGCCCGTCCACCAGCCGCGGCACGCAGCGC CTCTACATCCGGCTCAACACCCTCCACTACCTGCTCAGCCACATCCAGGCGCTCGACAAA TCCCTCTCCTTCTTCTCGCACGGCGGGTGCGCGTCGCCGGCGTCGGTCTCGAACCGCCAA CTGGCGCCGTCCGGCCGTTTCGACCGTGCGCGCGCCGCGGCGCAGTCGGCCATCGTCCAC GTCGCCGAGGTCGCCGCGTACCGCCTCGTCTTCCTGGACTCGCACCACTCCTTCTACGGC GGGCTCTACGTCGGGGGCGTCGCCGACGCCCGCATCCGCCCCGCGCTCCGCGCGCTGAAG CAGAACCTGTCGCTGCTCGTCTCCATCCTCGTGGACCGCGCGCAGCCGGTGGCCGTCCGG GAGGTGATGAAGGCCTCGTTCCAGGGGTTCCTCATCGTCCTGCTCGCCGGCGGCAGCGAC AGGAGCTTCACGGTGGAGGACCACGCGATGGTCGAAGAGGACTTCCGGAGCCTGAAGCGG GCCTTCTGCACGCGCGGGGAGGGGCTCGTGTCCGAGCAGGTGGTCGAGGCCGAGGCCCGG GCCGCGGAGGGCGTCGTCGCGCTCATGGCGCTGACGGCGGAGCAGCTCGTGGAGGAGTTT GGAATCGCGGCGTACGAGTGCACCGAGGCGGTCTCCGAGAGGCAGCGCCTACCGTTGCCG CCGACGACCAGGCGGTGGAGCCGCAGTGAGCCAAACACCATCCTGCGCGTGCTGTGCCAT CGCGACGACGAGGTCGCCAGCCACTTCCTGAAGCGCACATTTCAGCTTCCCAAGAGGCGG TAA

Peptide Sequence

PEP ID	Zm00001d027590_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:8573975:8577848:-1 gene:Zm00001d027590 transcript:Zm00001d027590_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:php20603
Sequence	MQVADARAIDTGKASDTMRAICDAVLALAWRCAPGTGSPGEACHWADGYPLNVLLYVSLL QAIFDLKEETVVLDEVDELLELMRRAWQTLGIDKMIHNVCFAWVLFQQYVATGQIEPDLA GAALTVLGDVAADAKQEHRDPVYTQVLSSVLGSIHDWSEKRLLDYHEWYGKGMAATGAGA MVIPLSLALSTSKIIAESVPGMGIDLADSEHDGIGSFAGNRVDHYVRCSMRNAFAKALEN ELGQGNSMVIQRDDDPSETMARLAKDTEQLAQFELENFSPVLKRWHPFPGASAVATLHSC YGVLLKQYVAKATCLTNELVHVLHAAGRLEKALVPMMVEDVADSDDGGRSLVREVVPYDV DSLVARFLRTWIEERLRVARECLLRSKDTESWIPKSKGEPYARSAVELMKLAKATVDEFF GIPVTARDDMVQNVADGLGAIVQEYISFLASCGTKQSYLPPLPPLTRCNQDSTIIRLWKR AATPCREAGTNPRGRAHHGQSESISGGNNPRPSTSRGTQRLYIRLNTLHYLLSHIQALDK SLSFFSHGGCASPASVSNRQLAPSGRFDRARAAAQSAIVHVAEVAAYRLVFLDSHHSFYG GLYVGGVADARIRPALRALKQNLSLLVSILVDRAQPVAVREVMKASFQGFLIVLLAGGSD RSFTVEDHAMVEEDFRSLKRAFCTRGEGLVSEQVVEAEARAAEGVVALMALTAEQLVEEF GIAAYECTEAVSERQRLPLPPTTRRWSRSEPNTILRVLCHRDDEVASHFLKRTFQLPKRR

Transcript Sequence

Transcript ID	Zm00001d027590_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:8573975:8577848:-1 gene:Zm00001d027590 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:php20603
Sequence	TCCGCCTCCCCTTCCTCTCCTGGCGTGCCCCCGGCCTCTCCCTGAGGCCGAAAGAGCCAG CACGTTCTGCTGCTCGATCGGACGTGGGGAAGAGGACGACATGGGGCGCCTCCAGTACCA ACACCGCTCGCGGTCCGACTCCTCCTTCGCGCGCTCCTCCGAGACCACCGCCGCCGACCT CGATGCGCGCAGCCTCGGCTCCACCGCCGCCGCGGAAACCGTGGAGTGCCCCTTCGGTCA CATCGATGGCCTCTCCCGTGCCGAGCTGCGGGAGGCCGCGTACGAGGTCTTCTTCATGTC GTGCCGCGCCGGCGGCGGAAGGGGAGGAGGAGCAGGCGGCGGCGGCGGGCTGAACTATTA CCCGCCGTGCTCCGGTTCCGGGAGATCATGCAGGTCGCCGACGCTCGCGCCATCGACACC GGCAAGGCCTCGGACACCATGCGCGCCATCTGCGATGCCGTGCTCGCCCTCGCCTGGCGC TGCGCTCCCGGCACGGGGTCCCCGGGCGAGGCCTGCCACTGGGCCGACGGGTACCCACTC AACGTGCTCCTCTACGTCTCGCTGCTCCAGGCCATATTTGACCTCAAGGAGGAGACCGTT GTGCTCGACGAGGTGGATGAGCTCCTGGAGCTCATGAGGCGGGCATGGCAGACGCTGGGG ATCGACAAGATGATCCACAACGTGTGCTTCGCTTGGGTGCTCTTCCAGCAGTACGTGGCC ACCGGGCAGATCGAGCCGGACCTCGCCGGCGCCGCACTCACGGTGCTCGGTGATGTGGCA GCCGACGCGAAGCAGGAGCACCGTGACCCGGTGTACACCCAGGTGCTCTCGAGTGTTCTT GGCTCGATACATGACTGGTCAGAGAAACGGCTGCTTGATTACCATGAATGGTACGGGAAG GGCATGGCTGCCACCGGCGCTGGGGCAATGGTGATTCCGCTGTCTCTGGCACTTTCCACG AGCAAGATCATCGCAGAGAGTGTGCCTGGGATGGGCATCGATCTGGCAGACTCCGAGCAC GACGGCATCGGGAGCTTCGCTGGCAACCGTGTGGATCACTACGTCAGATGCTCCATGAGA AATGCCTTCGCTAAGGCATTGGAGAACGAGCTCGGACAAGGGAACAGCATGGTCATCCAA CGCGACGACGACCCCAGCGAGACCATGGCACGGCTCGCCAAGGACACGGAGCAGCTGGCT CAGTTCGAGCTGGAGAACTTCAGCCCGGTGCTGAAGCGGTGGCACCCGTTCCCGGGCGCG TCCGCGGTGGCCACGCTCCACAGCTGCTACGGCGTCTTGCTGAAGCAGTACGTGGCCAAG GCGACGTGCCTGACCAACGAGCTCGTGCACGTGCTGCACGCGGCGGGCAGGCTCGAGAAG GCCCTGGTGCCGATGATGGTCGAGGACGTGGCGGACAGCGACGACGGCGGCAGGTCGTTG GTCAGGGAGGTCGTCCCCTACGACGTGGACTCCCTCGTGGCGCGCTTCCTCCGGACTTGG ATCGAGGAGAGGCTCAGGGTTGCTAGGGAGTGCCTCCTGAGGTCCAAGGACACTGAGAGC TGGATACCCAAGTCCAAAGGCGAGCCGTATGCGCGATCCGCGGTGGAGCTGATGAAGCTG GCCAAGGCGACCGTCGACGAGTTCTTCGGGATCCCGGTGACCGCGAGGGACGACATGGTT CAGAACGTCGCCGACGGCTTGGGCGCCATCGTTCAGGAGTACATCTCCTTCCTCGCGTCT TGCGGCACCAAGCAGAGCTACCTCCCTCCGCTGCCTCCACTGACCAGGTGCAACCAGGAC TCGACGATCATCAGGCTCTGGAAGAGGGCGGCGACGCCGTGCCGAGAAGCCGGGACGAAC CCGCGCGGCCGCGCCCACCACGGCCAGAGCGAGTCCATCTCGGGCGGCAACAACCCGCGC CCGTCCACCAGCCGCGGCACGCAGCGCCTCTACATCCGGCTCAACACCCTCCACTACCTG CTCAGCCACATCCAGGCGCTCGACAAATCCCTCTCCTTCTTCTCGCACGGCGGGTGCGCG TCGCCGGCGTCGGTCTCGAACCGCCAACTGGCGCCGTCCGGCCGTTTCGACCGTGCGCGC GCCGCGGCGCAGTCGGCCATCGTCCACGTCGCCGAGGTCGCCGCGTACCGCCTCGTCTTC CTGGACTCGCACCACTCCTTCTACGGCGGGCTCTACGTCGGGGGCGTCGCCGACGCCCGC ATCCGCCCCGCGCTCCGCGCGCTGAAGCAGAACCTGTCGCTGCTCGTCTCCATCCTCGTG GACCGCGCGCAGCCGGTGGCCGTCCGGGAGGTGATGAAGGCCTCGTTCCAGGGGTTCCTC ATCGTCCTGCTCGCCGGCGGCAGCGACAGGAGCTTCACGGTGGAGGACCACGCGATGGTC GAAGAGGACTTCCGGAGCCTGAAGCGGGCCTTCTGCACGCGCGGGGAGGGGCTCGTGTCC GAGCAGGTGGTCGAGGCCGAGGCCCGGGCCGCGGAGGGCGTCGTCGCGCTCATGGCGCTG ACGGCGGAGCAGCTCGTGGAGGAGTTTGGAATCGCGGCGTACGAGTGCACCGAGGCGGTC TCCGAGAGGCAGCGCCTACCGTTGCCGCCGACGACCAGGCGGTGGAGCCGCAGTGAGCCA AACACCATCCTGCGCGTGCTGTGCCATCGCGACGACGAGGTCGCCAGCCACTTCCTGAAG CGCACATTTCAGCTTCCCAAGAGGCGGTAACTGCTGACTAGGCTTCGCATCGCAGGGTGC TTTTTTAATCGTTGCGGCCAGTGTGCGTGCGTGTGTGTGTGTTGCAATTCAGCACGGGGG AGCATATAGTCGAGGAAGGGGGTAACATACACAAAAACAATCGATCATATTGACAAAAGA ATGACATTGAAGCTACAAAAAATACCATCCTAGAATATGGATGGCAATGTAATGTTTACA AACATATGAAAGAAATATGATCAC