Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027534_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:7566776:7568986:-1 gene:Zm00001d027534 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable acyl-activating enzyme 1 peroxisomal
Sequence

ATGGACGGATCCATGTGGTGCGCTGCCAACTACGTGCCTCTGACGCCGCTCAGCTTCCTG
GAGCGCGCCGCGGTCGTGTACGGCGACCGCGCGGCCGTCGTTTGCGGCGATAGGCGGTTC
TCGTGGCGCGAGACGAGGGAGCGGTGCCTCGCCGGGGCAGCCGCGCTCGCTCGTCTCGGC
GTTGGCCGCCGCGACGTGGTCGCGGTCATCGCCTCGAACGTACCGGCGATGTACGAGCTC
CATTTCAGCGTGCCGATGACCGGCGCCGTCCTGTGCACGCTCAACACCCGCCACGACGCG
GCCATGGTGTCCGTCCTGCTGAAACACTCGGAAGCCAAGGTCTTCCTCGTGGAGTCGCAG
TTCCACGCCGTGGCCCGCGACGCGCTCAGGCTCCTCGCCGACGCCAAAGACAGGCTTCCT
CTCGTCATCACGGTCTCTGACCCCAGCAGCAGCAGCAGCACCGGCGACGGCCGCGGCAGC
AACGACGGCAGCGTCGCGGTCGCGGAGTACGAAGCGCTTCTGCGGAGCGCGCCGCGCGAC
TTCGAAATCCGGTGGCCGGCAGACGAGCGCGACCCGATATCGCTGAACTACACGTCGGGC
ACCACGTCGAGGCCCAAGGGCGTCATCTACAGCCACCGCGGCGCGTTCCTCAACACGCTG
GCCACGGTGCTCGTCAACGAGATGGCGACCATGCCCGTGTACCTCTGGACCGTGCCTATG
TTCCACTGCAACGGGTGGTGCATGGTGTGGGCCACCGCGGCGCAGGGCGGCACGAGCGTC
TGCATCGGCAGCGTGTCCCCCGGGGTGGTCTTCGACCACATCGTGCGCCACGGCGTCACC
AACATGGGCGGCGCGCCCACGGTGCTCAGCATGCTCGCGAACGCGCCGGCGGCGGATCGG
AAGCCGCTGCCGAGGAGGGTCCGCATCTCCACGGGCGGCGCGCCGCCGCCGCCGCAGGTG
CTGGCCAAGATGGACGAGCTCGGCTTCGACGTCGCGCACGGGTACGGGCTCACCGAGACG
TACGGCCCGGCGACGACGTGCGTGTGGAAGCCCGAGTGGGACGCGCTGCCGCCCGCGGAG
CGCGCCCGGATGAAGGCGCTGCAGGGCGTCGCTCACGCCATGGTCCAGGAGGTCGCCATC
AAGGACCCGGCGAGCATGGAGACGTTGCCCTCCGACGGGCGCGCCGTGGGCGAGGTGATG
CTCCGGGGGAACACGGTCATGGGCGGGTACTACAAGGACGCGGGGGCCACGGAGGAGGCC
ATGCGCGGCGGGTGGCTGCGCACGGGCGACCTCGGCGTGCGCCACCCGAACGGGTACATC
CAGCTCAAGGACCGGTCCAAGGACATCATCATCTCGGGCGGCGAGAACATCAGCTCCATC
GAGGTGGAGTCGGTGCTGTTCGGGCACCCCGCGGTGCTCGACGCCGCGGTGGTCGCGCGG
CCCGACGACCACTGGGGCGAGGCGCCGTGCGCGTTCGTCACGCTCAGGGACGGCGCGAGA
GCCACCGCGGACGACATCATCCGCTTCTGCCGGGCTCGGCTGCCGCACTACATGGCGCCC
AGGACGGTGGTGTTCAGCGACCTCCCCAAGACTTCGACCGGCAAGACGCAGAAGTATCTG
CTCCGGGAGAAGGCGAGGGCCATGGGAGGCCTGCGCAAGCCAGATCGAAGCAGGCTCTAG

Peptide Sequence

PEP ID

Zm00001d027534_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:7566776:7568986:-1 gene:Zm00001d027534 transcript:Zm00001d027534_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable acyl-activating enzyme 1 peroxisomal
Sequence

MDGSMWCAANYVPLTPLSFLERAAVVYGDRAAVVCGDRRFSWRETRERCLAGAAALARLG
VGRRDVVAVIASNVPAMYELHFSVPMTGAVLCTLNTRHDAAMVSVLLKHSEAKVFLVESQ
FHAVARDALRLLADAKDRLPLVITVSDPSSSSSTGDGRGSNDGSVAVAEYEALLRSAPRD
FEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAFLNTLATVLVNEMATMPVYLWTVPM
FHCNGWCMVWATAAQGGTSVCIGSVSPGVVFDHIVRHGVTNMGGAPTVLSMLANAPAADR
KPLPRRVRISTGGAPPPPQVLAKMDELGFDVAHGYGLTETYGPATTCVWKPEWDALPPAE
RARMKALQGVAHAMVQEVAIKDPASMETLPSDGRAVGEVMLRGNTVMGGYYKDAGATEEA
MRGGWLRTGDLGVRHPNGYIQLKDRSKDIIISGGENISSIEVESVLFGHPAVLDAAVVAR
PDDHWGEAPCAFVTLRDGARATADDIIRFCRARLPHYMAPRTVVFSDLPKTSTGKTQKYL
LREKARAMGGLRKPDRSRL

Transcript Sequence

Transcript ID

Zm00001d027534_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:7566776:7568986:-1 gene:Zm00001d027534 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable acyl-activating enzyme 1 peroxisomal
Sequence

CAACCGGACACCTAAGCGTCCAAAGATGACTAGCTCCCTCGTCATCTTCTAATGTCGTTA
ATCACCTCGTCATCCACATTGGGTCGCGTTGCGCTTGATCCGAAGGAGCACCTGCCACAT
CTGGCCATCTCTCAGTCTCACACGCGCTGCCATGGACGGATCCATGTGGTGCGCTGCCAA
CTACGTGCCTCTGACGCCGCTCAGCTTCCTGGAGCGCGCCGCGGTCGTGTACGGCGACCG
CGCGGCCGTCGTTTGCGGCGATAGGCGGTTCTCGTGGCGCGAGACGAGGGAGCGGTGCCT
CGCCGGGGCAGCCGCGCTCGCTCGTCTCGGCGTTGGCCGCCGCGACGTGGTCGCGGTCAT
CGCCTCGAACGTACCGGCGATGTACGAGCTCCATTTCAGCGTGCCGATGACCGGCGCCGT
CCTGTGCACGCTCAACACCCGCCACGACGCGGCCATGGTGTCCGTCCTGCTGAAACACTC
GGAAGCCAAGGTCTTCCTCGTGGAGTCGCAGTTCCACGCCGTGGCCCGCGACGCGCTCAG
GCTCCTCGCCGACGCCAAAGACAGGCTTCCTCTCGTCATCACGGTCTCTGACCCCAGCAG
CAGCAGCAGCACCGGCGACGGCCGCGGCAGCAACGACGGCAGCGTCGCGGTCGCGGAGTA
CGAAGCGCTTCTGCGGAGCGCGCCGCGCGACTTCGAAATCCGGTGGCCGGCAGACGAGCG
CGACCCGATATCGCTGAACTACACGTCGGGCACCACGTCGAGGCCCAAGGGCGTCATCTA
CAGCCACCGCGGCGCGTTCCTCAACACGCTGGCCACGGTGCTCGTCAACGAGATGGCGAC
CATGCCCGTGTACCTCTGGACCGTGCCTATGTTCCACTGCAACGGGTGGTGCATGGTGTG
GGCCACCGCGGCGCAGGGCGGCACGAGCGTCTGCATCGGCAGCGTGTCCCCCGGGGTGGT
CTTCGACCACATCGTGCGCCACGGCGTCACCAACATGGGCGGCGCGCCCACGGTGCTCAG
CATGCTCGCGAACGCGCCGGCGGCGGATCGGAAGCCGCTGCCGAGGAGGGTCCGCATCTC
CACGGGCGGCGCGCCGCCGCCGCCGCAGGTGCTGGCCAAGATGGACGAGCTCGGCTTCGA
CGTCGCGCACGGGTACGGGCTCACCGAGACGTACGGCCCGGCGACGACGTGCGTGTGGAA
GCCCGAGTGGGACGCGCTGCCGCCCGCGGAGCGCGCCCGGATGAAGGCGCTGCAGGGCGT
CGCTCACGCCATGGTCCAGGAGGTCGCCATCAAGGACCCGGCGAGCATGGAGACGTTGCC
CTCCGACGGGCGCGCCGTGGGCGAGGTGATGCTCCGGGGGAACACGGTCATGGGCGGGTA
CTACAAGGACGCGGGGGCCACGGAGGAGGCCATGCGCGGCGGGTGGCTGCGCACGGGCGA
CCTCGGCGTGCGCCACCCGAACGGGTACATCCAGCTCAAGGACCGGTCCAAGGACATCAT
CATCTCGGGCGGCGAGAACATCAGCTCCATCGAGGTGGAGTCGGTGCTGTTCGGGCACCC
CGCGGTGCTCGACGCCGCGGTGGTCGCGCGGCCCGACGACCACTGGGGCGAGGCGCCGTG
CGCGTTCGTCACGCTCAGGGACGGCGCGAGAGCCACCGCGGACGACATCATCCGCTTCTG
CCGGGCTCGGCTGCCGCACTACATGGCGCCCAGGACGGTGGTGTTCAGCGACCTCCCCAA
GACTTCGACCGGCAAGACGCAGAAGTATCTGCTCCGGGAGAAGGCGAGGGCCATGGGAGG
CCTGCGCAAGCCAGATCGAAGCAGGCTCTAGTTGACCTGTTGCTGGGAACAGTCCACTGG
CTGCATTCCTGGCAGCCTGCTGATAGTTTTATCTTGGTCAACTACGCTTAGCCATCATCG
ATCAAGGGGCAGCATTCAGTCATGCCCTCGTGCTTTCACAGCCACCACGTTGCACATGGA
CCTGTACGGTGAAATAGTATTGCAGGACTTGGCCATTCATGGAATGCTTTATTGGATCAT
CCCAATTCTAATAAATACGTATTCACTCACAGATGCAAA