Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d027519_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:7339915:7346200:1 gene:Zm00001d027519 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 5
Sequence	ATGGCGGCCCGGCCGGACGCGCGCAGCGGCTACTGCGCCGCGACGCGCACCTTCCGTAGC AAGCGCGCGGACGTCCCGCTCCCCGCCGACGCGGACCTGGACGTCGTCAGGTTCCTCGCG TCCCGCCGCCACGCGGGCGTCGTCGCGCTCGTCGACGCCGCCACGGGCCACCGGGTCACG TTCCAGGAACTCTGGCGCGCGGTGGAAGGGGCGGCCACCGCGCTCGCCGCGCCGCCGCTG TCGCTCCGCAAGGGCCAGGTCGCGCTCATCCTCTCCCCGAACTCCGTCCACTTCCCCGTT GCCGCCCTCGCAGCCATGTCCCTCGGCGCCGTCCTCACCACCGCCAACCCGCTCAACACG CCCGCCGAGATCGCCAAGCAGGTCGCCGACGCGCGCCCCGTCGTCGCCTTCACCACCCGC GACCTCCTCCCCAAGCTCCCGCGCGCCGGCGCCGGCGCCGGCATCCGCGTCGTCCTCCTC GAGCCCGACCGCCTCCCCTCCGACCCTAGCCCCGTCGTCGCCACCATCGGGGAGATCTCC GCCACGCCGCCCGACCCCACGCGCCGCCGGGACCGCGTCACACAGGACGACCCGGCCACG CTGCTCTACTCCTCGGGCACCACGGGGCCCAGCAAGGGCGTCGTCGCCACGCACCGGAGC CTCATCTCCATGGTGCAGATCATCATGTCGCGCTTCCGCCTCGAGGCCTCCAACAGGACC GAGACCTTCCTCTGCACGGTGCCCATGTTCCACGTCTACGGCCTCGTCGCCTTCGCCACG GGGCTGCTCGGCTGCGGCGCCACCATCGTCGTGCTCTCCAAGTACGAGCTCCCCGAGATG CTGCGCGCCATCAACGAATACGGGGTCACCTACCTCCCACTCGTGCCGCCCATCCTCGTC GCCATGCTGGCGCACCCCAACCGCCTGCCGCTCGGGGGCCTGCGCAAGGTGCTCTCCGGC GGAGCGCCGCTCAGCAAGGAGCTGATCGAGGGGTTTAAGGAGAAATACCCGCAGGTGGAG ATCCTTCAGGGGTACGGGCTGACGGAGAGCACGGCTATCGGCGCGTCCACGGACTCTGCC GAGGAGAGCAGCCGGTACGGTACGGCTGGGCTGCTGTCGCCAAGCACCGAGGCTAAGATC GTCGACCCAGAGACCGGCGAGGCGCTGCCGGTGAACCGCACCGGCGAGCTCTGGATCCGG GGGCCATACGTCATGAAAGGGTATTTCAAGAACGCGGAGGCAACACAATCAACATTGACA CCTGATGGATGGCTCAAGACTGGGGATCTCTGCTACATAGATGAGGATGGTTATCTCTTC GTTGTGGATCGTCTGAAGGAGTTGATCAAATACAAAGGGTACCAGGTGCCTCCGGCGGAG TTGGAAGCTCTTTTGCTAACACATCCAGAAATCGAAGATGTCGCCGTTATACCGTTTCCC GACCGTGAGGTCGGCCAGTTCCCAATGGCCTACGTAGTGAGGAAGAAAGGGAGCAATTTG TCAGAGCGCGAGGTGATGGAGTTCGTGGCGAAACAGGTAGCGCCTTACAAGAAGGTTAGA AAGGTGGCGTTTGTGGCGGAGATTCCCAAGAACGCGTCCGGCAAGATTCTGAGGAAGGAT CTCATCAAGCTCGCCACATCCAAATCCAAACTATGA

Peptide Sequence

PEP ID	Zm00001d027519_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:7339915:7346200:1 gene:Zm00001d027519 transcript:Zm00001d027519_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 5
Sequence	MAARPDARSGYCAATRTFRSKRADVPLPADADLDVVRFLASRRHAGVVALVDAATGHRVT FQELWRAVEGAATALAAPPLSLRKGQVALILSPNSVHFPVAALAAMSLGAVLTTANPLNT PAEIAKQVADARPVVAFTTRDLLPKLPRAGAGAGIRVVLLEPDRLPSDPSPVVATIGEIS ATPPDPTRRRDRVTQDDPATLLYSSGTTGPSKGVVATHRSLISMVQIIMSRFRLEASNRT ETFLCTVPMFHVYGLVAFATGLLGCGATIVVLSKYELPEMLRAINEYGVTYLPLVPPILV AMLAHPNRLPLGGLRKVLSGGAPLSKELIEGFKEKYPQVEILQGYGLTESTAIGASTDSA EESSRYGTAGLLSPSTEAKIVDPETGEALPVNRTGELWIRGPYVMKGYFKNAEATQSTLT PDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEIEDVAVIPFP DREVGQFPMAYVVRKKGSNLSEREVMEFVAKQVAPYKKVRKVAFVAEIPKNASGKILRKD LIKLATSKSKL

Transcript Sequence

Transcript ID	Zm00001d027519_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:7339915:7346200:1 gene:Zm00001d027519 gene_biotype:protein_coding transcript_biotype:protein_coding description:4-coumarate--CoA ligase-like 5
Sequence	GACCTGCCACCCGTACTAGTCAGCCAGACGGCCAGACCCCAAACAGAGCAGGACTAGCAC TGGCAGTCTAGCACACCCGCACTGCGTCTCCGCAGCACACACTCGCACGCACGAGAAGGC CGGAGAGGCGGCGCACCCGGAGAGGCAAAGGCAAGCGATCCCTCTCCCTCCCTCCCTCGT ATCCAGGACAACAGCCCGTGCGATCCGATCCCGATGGCGGCCCGGCCGGACGCGCGCAGC GGCTACTGCGCCGCGACGCGCACCTTCCGTAGCAAGCGCGCGGACGTCCCGCTCCCCGCC GACGCGGACCTGGACGTCGTCAGGTTCCTCGCGTCCCGCCGCCACGCGGGCGTCGTCGCG CTCGTCGACGCCGCCACGGGCCACCGGGTCACGTTCCAGGAACTCTGGCGCGCGGTGGAA GGGGCGGCCACCGCGCTCGCCGCGCCGCCGCTGTCGCTCCGCAAGGGCCAGGTCGCGCTC ATCCTCTCCCCGAACTCCGTCCACTTCCCCGTTGCCGCCCTCGCAGCCATGTCCCTCGGC GCCGTCCTCACCACCGCCAACCCGCTCAACACGCCCGCCGAGATCGCCAAGCAGGTCGCC GACGCGCGCCCCGTCGTCGCCTTCACCACCCGCGACCTCCTCCCCAAGCTCCCGCGCGCC GGCGCCGGCGCCGGCATCCGCGTCGTCCTCCTCGAGCCCGACCGCCTCCCCTCCGACCCT AGCCCCGTCGTCGCCACCATCGGGGAGATCTCCGCCACGCCGCCCGACCCCACGCGCCGC CGGGACCGCGTCACACAGGACGACCCGGCCACGCTGCTCTACTCCTCGGGCACCACGGGG CCCAGCAAGGGCGTCGTCGCCACGCACCGGAGCCTCATCTCCATGGTGCAGATCATCATG TCGCGCTTCCGCCTCGAGGCCTCCAACAGGACCGAGACCTTCCTCTGCACGGTGCCCATG TTCCACGTCTACGGCCTCGTCGCCTTCGCCACGGGGCTGCTCGGCTGCGGCGCCACCATC GTCGTGCTCTCCAAGTACGAGCTCCCCGAGATGCTGCGCGCCATCAACGAATACGGGGTC ACCTACCTCCCACTCGTGCCGCCCATCCTCGTCGCCATGCTGGCGCACCCCAACCGCCTG CCGCTCGGGGGCCTGCGCAAGGTGCTCTCCGGCGGAGCGCCGCTCAGCAAGGAGCTGATC GAGGGGTTTAAGGAGAAATACCCGCAGGTGGAGATCCTTCAGGGGTACGGGCTGACGGAG AGCACGGCTATCGGCGCGTCCACGGACTCTGCCGAGGAGAGCAGCCGGTACGGTACGGCT GGGCTGCTGTCGCCAAGCACCGAGGCTAAGATCGTCGACCCAGAGACCGGCGAGGCGCTG CCGGTGAACCGCACCGGCGAGCTCTGGATCCGGGGGCCATACGTCATGAAAGGGTATTTC AAGAACGCGGAGGCAACACAATCAACATTGACACCTGATGGATGGCTCAAGACTGGGGAT CTCTGCTACATAGATGAGGATGGTTATCTCTTCGTTGTGGATCGTCTGAAGGAGTTGATC AAATACAAAGGGTACCAGGTGCCTCCGGCGGAGTTGGAAGCTCTTTTGCTAACACATCCA GAAATCGAAGATGTCGCCGTTATACCGTTTCCCGACCGTGAGGTCGGCCAGTTCCCAATG GCCTACGTAGTGAGGAAGAAAGGGAGCAATTTGTCAGAGCGCGAGGTGATGGAGTTCGTG GCGAAACAGGTAGCGCCTTACAAGAAGGTTAGAAAGGTGGCGTTTGTGGCGGAGATTCCC AAGAACGCGTCCGGCAAGATTCTGAGGAAGGATCTCATCAAGCTCGCCACATCCAAATCC AAACTATGAAAATTGTTTTTCGTGTTTACAGTGCTGGAATACGCCTGTCGTCCACGAGCG GCGAGCCATTCTCTACGCTGCCCCGGTAGTTTGGTTGTAGAATGCTTGTATAACTGAAGA TCCCGTCGGCTATGTGCTTGCTTGTGTACAGTGCTCTGTTCTCGTACAATACAATATTGG GAGGGAATACTAGGCGTCTGTACGTAGGCTTGGATGGAAATAATATCCGGTAATTTCAGT GTTGGTATCACTAGAAA