Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d027517_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:7297900:7300800:1 gene:Zm00001d027517 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiol-disulfide oxidoreductase LTO1
Sequence

ATGGCGACCATGTCTGCAGCCCTCGCCATCTCCTTACCGTCGCTAACTCGCGTTGCCGTC
GCAAGTACGCCCTCTGCTTCCTCGCGCATCAAGAGAGCCACACAATTCAGGTGCTGCGCG
GATTCTTCTTCCCAGGAGCAGGAGATCTCCGGCGCCCCTCCCGCCCCGCCGCTGGACAAA
TCTGCAAGATCGCCCCCTTCCTCTCTGCTGGGCATTTCCACGAGCACCTGGTCTGCGGGT
GTCGCTGGGCTGGGGTTCCTGGAGACTGGTTACCTCACTTACCTCAAGCTCACGGGCTCC
GAGGCGTTCTGCCCCATCACTGGCGCAGGCTGTGGCGACGTCCTCGACAGCGACTACTCC
GTCGTCTTTGGGATACCTCTTCCCATAGTTGGTCTGGTGGCATATGGTTTAGTTACCGCA
CTTTCTCTGCAAAAAAATGGAAAGGACTTGCTCCAAGGATCAGATGACCTGGATGTTAGA
TTGATATTGCTTCTGGTTGCTACTTCTATGGCAACTGCGAGTGTTTATTTTCTTTATATT
CTAAGCACTAAATTTATTGGGGTGTCATGTTCGTACTGTTTGCTCTCAGCATTTCTCTCA
TTCACTCTACTCTTCATCAGAGTAAAGGACATCGGTTTTGAACGTATCCAGAAGTTCGCT
GGCATTCAGTTAGCTGTAGCTGTCATTATAGCTCTTGCTTTGACAAACTCATATAGTTCT
GCTACTACTCAATTGAAAGGCACAGATGATTTCGTATTACAGCCGTATGAAACAGAGATA
TCAACCGAATCATCCCCATTTGCCATTGCACTGGCTAAACATTTGCACTCTATAGGTGCT
AAGATGTATGGAGCATTCTGGTGTTCTCATTGCAATGAACAAAAACAGATGTTTGGTCAT
GAAGCTACGAAAATTCTGGATTATGTGGAATGTTTCCCAAATGGAGCTGGTAAGGGAAAG
AAAATGACCGCTGAATGTGCCGCTGCTGGTCTTGAAGGTTTTCCAACATGGTTCATCAAC
GGAAAGATTCTGAGCGGTGACCAAGAGCTTGAAGTTCTGGCTGAAGCATCAGGCTTCGTT
GGTGAGGGCACAGAACAACCCAAGGGAATATCGCAGAATTGA

Peptide Sequence

PEP ID

Zm00001d027517_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:7297900:7300800:1 gene:Zm00001d027517 transcript:Zm00001d027517_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiol-disulfide oxidoreductase LTO1
Sequence

MATMSAALAISLPSLTRVAVASTPSASSRIKRATQFRCCADSSSQEQEISGAPPAPPLDK
SARSPPSSLLGISTSTWSAGVAGLGFLETGYLTYLKLTGSEAFCPITGAGCGDVLDSDYS
VVFGIPLPIVGLVAYGLVTALSLQKNGKDLLQGSDDLDVRLILLLVATSMATASVYFLYI
LSTKFIGVSCSYCLLSAFLSFTLLFIRVKDIGFERIQKFAGIQLAVAVIIALALTNSYSS
ATTQLKGTDDFVLQPYETEISTESSPFAIALAKHLHSIGAKMYGAFWCSHCNEQKQMFGH
EATKILDYVECFPNGAGKGKKMTAECAAAGLEGFPTWFINGKILSGDQELEVLAEASGFV
GEGTEQPKGISQN

Transcript Sequence

Transcript ID

Zm00001d027517_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:7297900:7300800:1 gene:Zm00001d027517 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiol-disulfide oxidoreductase LTO1
Sequence

GGATCGCTGCTCTGGGGTGCAGGCGTGGTCGCGTGTAGTCAGCTCGCCTTGCCCGCTCTA
ATCGGTCACCACTGACCTCCGCCCATGGCGACCATGTCTGCAGCCCTCGCCATCTCCTTA
CCGTCGCTAACTCGCGTTGCCGTCGCAAGTACGCCCTCTGCTTCCTCGCGCATCAAGAGA
GCCACACAATTCAGGTGCTGCGCGGATTCTTCTTCCCAGGAGCAGGAGATCTCCGGCGCC
CCTCCCGCCCCGCCGCTGGACAAATCTGCAAGATCGCCCCCTTCCTCTCTGCTGGGCATT
TCCACGAGCACCTGGTCTGCGGGTGTCGCTGGGCTGGGGTTCCTGGAGACTGGTTACCTC
ACTTACCTCAAGCTCACGGGCTCCGAGGCGTTCTGCCCCATCACTGGCGCAGGCTGTGGC
GACGTCCTCGACAGCGACTACTCCGTCGTCTTTGGGATACCTCTTCCCATAGTTGGTCTG
GTGGCATATGGTTTAGTTACCGCACTTTCTCTGCAAAAAAATGGAAAGGACTTGCTCCAA
GGATCAGATGACCTGGATGTTAGATTGATATTGCTTCTGGTTGCTACTTCTATGGCAACT
GCGAGTGTTTATTTTCTTTATATTCTAAGCACTAAATTTATTGGGGTGTCATGTTCGTAC
TGTTTGCTCTCAGCATTTCTCTCATTCACTCTACTCTTCATCAGAGTAAAGGACATCGGT
TTTGAACGTATCCAGAAGTTCGCTGGCATTCAGTTAGCTGTAGCTGTCATTATAGCTCTT
GCTTTGACAAACTCATATAGTTCTGCTACTACTCAATTGAAAGGCACAGATGATTTCGTA
TTACAGCCGTATGAAACAGAGATATCAACCGAATCATCCCCATTTGCCATTGCACTGGCT
AAACATTTGCACTCTATAGGTGCTAAGATGTATGGAGCATTCTGGTGTTCTCATTGCAAT
GAACAAAAACAGATGTTTGGTCATGAAGCTACGAAAATTCTGGATTATGTGGAATGTTTC
CCAAATGGAGCTGGTAAGGGAAAGAAAATGACCGCTGAATGTGCCGCTGCTGGTCTTGAA
GGTTTTCCAACATGGTTCATCAACGGAAAGATTCTGAGCGGTGACCAAGAGCTTGAAGTT
CTGGCTGAAGCATCAGGCTTCGTTGGTGAGGGCACAGAACAACCCAAGGGAATATCGCAG
AATTGATATTAAATCATTCTGAACTGAAGCTGGCAGGTTCCTGAACCAATAATCTGGATG
CAGTCTTTAGATAGCAATATCCCAAATGTTCACTAGCACAGTTGCATCCGAAGGTTGCTT
ACCCTACTTACAACTAACCACTATAATTTGTAGCGACTGTACATGCTCTACGAGAAGAGA
GAACAAACCCCAAGACAGCGTGTTGTATAACCATTTGTAGATCTAGTTTGTACTGTAAAT
GTGTAATCCTACGAAAACGGTCTTGTTCATTCGCTTGTATACGATGTATTGATGTTTAAT
GATATAAAAAAACTCGTGGGTCCCTATACCCGCTTATGTGAA